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CBS51388_003080-T1, CBS51388_003080-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_003080-T1
Unique NameCBS51388_003080-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An04:419534..422062-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_003080-T1 ID=CBS51388_003080-T1|Name=CBS51388_003080-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2529bp|location=Sequence derived from alignment at An04:419534..422062- (Aspergillus niger CBS 513.88)
ATGCCTCCTCCCAATAGGTACCAGAACTCGACCGACCTGCGACTTCTCCC
CTCGCAGCGGTTGGATACGAGTCTCCCCACCCGTCACACTTCGATGTCAA
ACTCCGAACCGTTCTCCTACAATGCCTCCTTCAGACGACTCAGTTCCAGA
CGTGCCCGCCCTACCGCGGCGTCGTTAGCAGACCTTTTCGTCAGCTCCCT
GGTCATGGCAGGTTACTGCCATGAGCACACCCCTCGAGCCAGGGGAATCT
CTACGGTCTCCATGAAGAATCCAGGGAATAACGTCGCTCGATGGCAGGAT
CGGGGGTTGACACACCGCAGGCAATTGTCGTCGAAACATCGCCTGGACTG
TCTAGGCACATCGACAGGGAGTCTGCATCGTTCAAGCGCACAACGCATGA
TTAATTCCGGTGTTGCGTTGAGAGTAGAAGATGAGGATGGTGAAGGGAAC
TGCTTTGCGAACAACCCGTCAGCGGGATCTTCATTCGAAGCTCGCTACCA
AGGCGCGGGCACAGAATCAACATTACAGTCACATGGAGGATTACGAGAAA
CAGATCTGGAGAAGTTGAACAGCGAGCTACCAACAGCGGACGCAGAGTCA
ACTAGCGAAGATAACTTGACTGCGAGCGAGAACGCCCCTGATGAGGATAG
GATTGGCCGCTTACCGGATTCGTCGAGCAAGTCGGAGAAATATCGCCATC
ACAAAAGAACAAGTCCAAGCAGGAAAGCATATACATCGACTTCACAATTA
TATCGAGCTGCCTTTGGCAATACACTCAACTGGAAACAGGCAGTTGATCT
TGTTGCAAACGAGACACAGAAGGGACCACCCTCAAACGAGGTATTTCCGG
CGGTAGACAAGTCGCGGGACGCTTTGGAGTACAAAACGGTTGAGGTATTC
TTGGACGCTATGTGGAATGAGAGGATTTCAAACCATTACGTGTTTCGACT
CTACAGAGATCTTCCCTCCCCCGGGGTTGCTTACCTGTCCAAACGCTCCC
GAGGAGCACTCCTACGTCGATTTGCCGATCCTCCAGACCGTCGTTGGGTG
GATGCTCGTCGTTACCTTGCGCTGATAGAAGACATGGTCGCTGCGAAGCT
GCCCATATCCCGCTCACTCTGGAGTTCTGCTATACACCTTGCAGGACGGG
CGTCTGGGAAGGTACGCAAGCAAGATGTGGTGAGGGCTATTGGATTATGG
AAACAAATGGAATATCTAGCGCGTGTGAAGTCTGATGACGTCGTGTTCAC
CATCCTCTTCGATATTGCCATCAAAGCGAATCAATTCACCGTCGCGGAAC
GACTATTGGAGGAAATGAAGAAGCGTAATATTGAGTTCCGGCGCTTTGGA
AAGGTCTCCAAGCTCTACTATTGTGGTATGCAAGAGGATGTTGCTGGAAT
CCAAGAGACATTTAACGAGTTTGTATCGAGTGGTGAGATTGTTGACACGG
TTGTAATGAACTGCCTAATGGCGTCATTCATTCGCGCCGGGGATGTGGAC
TCAGCGAAGCAGATATATGCAGAGATGCTTGAGGCCCAAGCAAAGTCCCA
AGAGACAGGGGAACTAAGCATCGAGTCGAAGCATTCAAAAACACCGCATC
TCACATCGGAGATGAACCTCTATCGGAGCCGAGTGAAGAAGCTGGGCCGA
GTCCTGCAAGAATCCACTTCACTGAAAGAAATCATGCCTGAACACCATCG
CGCGCTTCAGCAATCGCTTCACGCAATCCCTGACACTCGGACATTCCACA
TATTTCTTTCATTGCACGCTTACAAAACTGCTGATATTCATGCTTTCATG
TCTGTCCTTGCAGACATGGAGAAAGTCTTCGTGGTTCCGCCGCGTGGTAT
GATATACCTCCTGCTTTTTGACGGATTCGCTCGCAACGGGCGCAACAAGA
AAGGCTGGACGGCTGAACGGCTACGTGTAGCTTGGAGAACCTATCTGCGT
GCTCTCTACGAGTCAAGGACGAGACTTATTGAAATGTACCGCAGCCAAAG
TGGAAAGCACATCACAGAGATCCCGGTGTTAAAGGCCCCCGCCGCGATTG
AGATAGGCTGGCCAACAATTTCGCGAAAGCCAAGCGGCCTGTATACTCCA
TTGCCTTTTGCTGGCACCGATGCCAAGGAGTGGGGCGAGGCTCGAAACGA
GGAACAGAAGGTGATGGGCCAGTACGACGAGCGCAGAGGTGTCTCCCATA
CCAGTGAAGGCATGGCTGCTCTCGAAGAAGACATCGATGTTGACGAATTG
TTTCGACAGCAAGCTCAGGACCTGCAAAATGAGCTGCAAAATGAGCCGCG
AGATTCGGAAGAAATCGAACGCCGGATAGAGAATGGCGTCTTTCTTGGTC
GCCGAATGGTCATTATTATTCTCCGCGCATTCGGCGCATGCTGCGGACCA
GAGGAGCTTATGAAGGTCTGGCTGCAGATTATACGGATCTGGCAGCCGGA
GAAGCGCAAGGCGCTGGACGTCCTGGCTGCCAAGGAGGAGCTAGAGAGGC
AGATGAACAGACTCCAAAGGCGATATTAG
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Coding sequence (CDS) from alignment at An04:419534..422062-

>CBS51388_003080-T1 ID=CBS51388_003080-T1|Name=CBS51388_003080-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2529bp|location=Sequence derived from alignment at An04:419534..422062- (Aspergillus niger CBS 513.88)
ATGCCTCCTCCCAATAGGTACCAGAACTCGACCGACCTGCGACTTCTCCC
CTCGCAGCGGTTGGATACGAGTCTCCCCACCCGTCACACTTCGATGTCAA
ACTCCGAACCGTTCTCCTACAATGCCTCCTTCAGACGACTCAGTTCCAGA
CGTGCCCGCCCTACCGCGGCGTCGTTAGCAGACCTTTTCGTCAGCTCCCT
GGTCATGGCAGGTTACTGCCATGAGCACACCCCTCGAGCCAGGGGAATCT
CTACGGTCTCCATGAAGAATCCAGGGAATAACGTCGCTCGATGGCAGGAT
CGGGGGTTGACACACCGCAGGCAATTGTCGTCGAAACATCGCCTGGACTG
TCTAGGCACATCGACAGGGAGTCTGCATCGTTCAAGCGCACAACGCATGA
TTAATTCCGGTGTTGCGTTGAGAGTAGAAGATGAGGATGGTGAAGGGAAC
TGCTTTGCGAACAACCCGTCAGCGGGATCTTCATTCGAAGCTCGCTACCA
AGGCGCGGGCACAGAATCAACATTACAGTCACATGGAGGATTACGAGAAA
CAGATCTGGAGAAGTTGAACAGCGAGCTACCAACAGCGGACGCAGAGTCA
ACTAGCGAAGATAACTTGACTGCGAGCGAGAACGCCCCTGATGAGGATAG
GATTGGCCGCTTACCGGATTCGTCGAGCAAGTCGGAGAAATATCGCCATC
ACAAAAGAACAAGTCCAAGCAGGAAAGCATATACATCGACTTCACAATTA
TATCGAGCTGCCTTTGGCAATACACTCAACTGGAAACAGGCAGTTGATCT
TGTTGCAAACGAGACACAGAAGGGACCACCCTCAAACGAGGTATTTCCGG
CGGTAGACAAGTCGCGGGACGCTTTGGAGTACAAAACGGTTGAGGTATTC
TTGGACGCTATGTGGAATGAGAGGATTTCAAACCATTACGTGTTTCGACT
CTACAGAGATCTTCCCTCCCCCGGGGTTGCTTACCTGTCCAAACGCTCCC
GAGGAGCACTCCTACGTCGATTTGCCGATCCTCCAGACCGTCGTTGGGTG
GATGCTCGTCGTTACCTTGCGCTGATAGAAGACATGGTCGCTGCGAAGCT
GCCCATATCCCGCTCACTCTGGAGTTCTGCTATACACCTTGCAGGACGGG
CGTCTGGGAAGGTACGCAAGCAAGATGTGGTGAGGGCTATTGGATTATGG
AAACAAATGGAATATCTAGCGCGTGTGAAGTCTGATGACGTCGTGTTCAC
CATCCTCTTCGATATTGCCATCAAAGCGAATCAATTCACCGTCGCGGAAC
GACTATTGGAGGAAATGAAGAAGCGTAATATTGAGTTCCGGCGCTTTGGA
AAGGTCTCCAAGCTCTACTATTGTGGTATGCAAGAGGATGTTGCTGGAAT
CCAAGAGACATTTAACGAGTTTGTATCGAGTGGTGAGATTGTTGACACGG
TTGTAATGAACTGCCTAATGGCGTCATTCATTCGCGCCGGGGATGTGGAC
TCAGCGAAGCAGATATATGCAGAGATGCTTGAGGCCCAAGCAAAGTCCCA
AGAGACAGGGGAACTAAGCATCGAGTCGAAGCATTCAAAAACACCGCATC
TCACATCGGAGATGAACCTCTATCGGAGCCGAGTGAAGAAGCTGGGCCGA
GTCCTGCAAGAATCCACTTCACTGAAAGAAATCATGCCTGAACACCATCG
CGCGCTTCAGCAATCGCTTCACGCAATCCCTGACACTCGGACATTCCACA
TATTTCTTTCATTGCACGCTTACAAAACTGCTGATATTCATGCTTTCATG
TCTGTCCTTGCAGACATGGAGAAAGTCTTCGTGGTTCCGCCGCGTGGTAT
GATATACCTCCTGCTTTTTGACGGATTCGCTCGCAACGGGCGCAACAAGA
AAGGCTGGACGGCTGAACGGCTACGTGTAGCTTGGAGAACCTATCTGCGT
GCTCTCTACGAGTCAAGGACGAGACTTATTGAAATGTACCGCAGCCAAAG
TGGAAAGCACATCACAGAGATCCCGGTGTTAAAGGCCCCCGCCGCGATTG
AGATAGGCTGGCCAACAATTTCGCGAAAGCCAAGCGGCCTGTATACTCCA
TTGCCTTTTGCTGGCACCGATGCCAAGGAGTGGGGCGAGGCTCGAAACGA
GGAACAGAAGGTGATGGGCCAGTACGACGAGCGCAGAGGTGTCTCCCATA
CCAGTGAAGGCATGGCTGCTCTCGAAGAAGACATCGATGTTGACGAATTG
TTTCGACAGCAAGCTCAGGACCTGCAAAATGAGCTGCAAAATGAGCCGCG
AGATTCGGAAGAAATCGAACGCCGGATAGAGAATGGCGTCTTTCTTGGTC
GCCGAATGGTCATTATTATTCTCCGCGCATTCGGCGCATGCTGCGGACCA
GAGGAGCTTATGAAGGTCTGGCTGCAGATTATACGGATCTGGCAGCCGGA
GAAGCGCAAGGCGCTGGACGTCCTGGCTGCCAAGGAGGAGCTAGAGAGGC
AGATGAACAGACTCCAAAGGCGATATTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_003080CBS51388_003080Aspergillus niger CBS 513.88gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003080-T1.cdsCBS51388_003080-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003080-T1.exon1CBS51388_003080-T1.exon1Aspergillus niger CBS 513.88exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003080-T1CBS51388_003080-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR002885
DBxrefPFAM:PF01535
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An04supercontigAn04:419534..422062 -
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