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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:437171..438322+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003084-T1 ID=CBS51388_003084-T1|Name=CBS51388_003084-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1152bp|location=Sequence derived from alignment at An04:437171..438322+ (Aspergillus niger CBS 513.88)
ATGAAATACCCCTGGCTCCGCCCCCTCAAAGCAAAAGCCTTGCAACAAAT
AGCCCAGAAAACGGGGATTCAAAGCTCAGGCACCAAGGCTGTGTTGGTGG
AGAGGTTAGAAGGGGAACTTACTCCTCTCTTCCCTCATATTCAGAATGAC
AGAGGGAAGCTGAACGAACATAAGAACGAAAAGAGAAGGAATAATGATGA
TAATGATGGGATAAGAGTCCTAAGCATCGATATGGGGATTCGGAATCTGG
CTTTTGCGGTGTTGCATTCTCCTTATCCTTCCTCCTCCTCTTTTTCTTCT
TCGGGATCAATATCATCTACTGGATCATCCGAGGCATATACACCCAGAGA
CAAAGCCAAGGAAGGGAATAGCATAACCCTCACCGCGTGGAAAAGACTCT
CCATTCCTGATCTGTGCTATGCGCAACTTGAAGGAACCCCATCCCTCATC
ACCACCACTACCAAACCCAAGTCACAAGTCACAGAAGAAGCTAAAGAAGA
CTTTTCCCCCTCCCTCTACGCCCGCCACGCAAACACCCTCATCACGACCC
TCCTGTCCACGTATAACCCCACCCACATCCTGATCGAAAGACAGCGGTTC
CGCACGGGAGGCGGGTCCGCGGTCCAGGAGTGGACGATCCGCGTGGGTGT
TTTGGAGGGGATGTTGTATGCTGTTTTGGAGACGATTAATTCGTCCCTTT
TATCTTCTTCTTCTTTTTCTTCTGGTGGTAAGGTGCAGGTGTATCCTGTT
GAGCCTGGGAGGGTGAGTCGGTTTTGGGGGGAGGAATCTGGGGATATTGG
TGATGGGGGTGGAGATATGGTGGTGAAGAAGCAGAAGAAGAGGAAGAATG
TGAGGGATGTGAAGAAGATGAAGATTGCGTTGGTGAGGGAGTGGTTGGTG
TCTGCTGCGAATGACGATGGGGATGGGAGGGTAGTGCTTGGTGGTAGTGC
TGGGGAGGGGGATGAGGTGAGGGAGTTGGCGAGTGCGTTTCTGGAAAAGT
GTGAAGGGAAGAGACGGACCAAGAAGGGGGAAGATGGTGTGGATATTGGC
AAATTGGATGATTTGGCGGATTGTCTTGTGCAGGGGGTTACTTGGTTGGA
GTGGCAGAGGATGAGGGAGAAGATTGTTACGGAGGGGGGGATTAATTTAT
AA back to topCoding sequence (CDS) from alignment at An04:437171..438322+ >CBS51388_003084-T1 ID=CBS51388_003084-T1|Name=CBS51388_003084-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1152bp|location=Sequence derived from alignment at An04:437171..438322+ (Aspergillus niger CBS 513.88)
ATGAAATACCCCTGGCTCCGCCCCCTCAAAGCAAAAGCCTTGCAACAAAT
AGCCCAGAAAACGGGGATTCAAAGCTCAGGCACCAAGGCTGTGTTGGTGG
AGAGGTTAGAAGGGGAACTTACTCCTCTCTTCCCTCATATTCAGAATGAC
AGAGGGAAGCTGAACGAACATAAGAACGAAAAGAGAAGGAATAATGATGA
TAATGATGGGATAAGAGTCCTAAGCATCGATATGGGGATTCGGAATCTGG
CTTTTGCGGTGTTGCATTCTCCTTATCCTTCCTCCTCCTCTTTTTCTTCT
TCGGGATCAATATCATCTACTGGATCATCCGAGGCATATACACCCAGAGA
CAAAGCCAAGGAAGGGAATAGCATAACCCTCACCGCGTGGAAAAGACTCT
CCATTCCTGATCTGTGCTATGCGCAACTTGAAGGAACCCCATCCCTCATC
ACCACCACTACCAAACCCAAGTCACAAGTCACAGAAGAAGCTAAAGAAGA
CTTTTCCCCCTCCCTCTACGCCCGCCACGCAAACACCCTCATCACGACCC
TCCTGTCCACGTATAACCCCACCCACATCCTGATCGAAAGACAGCGGTTC
CGCACGGGAGGCGGGTCCGCGGTCCAGGAGTGGACGATCCGCGTGGGTGT
TTTGGAGGGGATGTTGTATGCTGTTTTGGAGACGATTAATTCGTCCCTTT
TATCTTCTTCTTCTTTTTCTTCTGGTGGTAAGGTGCAGGTGTATCCTGTT
GAGCCTGGGAGGGTGAGTCGGTTTTGGGGGGAGGAATCTGGGGATATTGG
TGATGGGGGTGGAGATATGGTGGTGAAGAAGCAGAAGAAGAGGAAGAATG
TGAGGGATGTGAAGAAGATGAAGATTGCGTTGGTGAGGGAGTGGTTGGTG
TCTGCTGCGAATGACGATGGGGATGGGAGGGTAGTGCTTGGTGGTAGTGC
TGGGGAGGGGGATGAGGTGAGGGAGTTGGCGAGTGCGTTTCTGGAAAAGT
GTGAAGGGAAGAGACGGACCAAGAAGGGGGAAGATGGTGTGGATATTGGC
AAATTGGATGATTTGGCGGATTGTCTTGTGCAGGGGGTTACTTGGTTGGA
GTGGCAGAGGATGAGGGAGAAGATTGTTACGGAGGGGGGGATTAATTTAT
AA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012337 |
| DBxref | InterPro:IPR036397 |
| DBxref | InterPro:IPR015242 |
| DBxref | InterPro:IPR003034 |
| DBxref | PFAM:PF09159 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:437171..438322 + |
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