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CBS51388_003092-T1, CBS51388_003092-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_003092-T1
Unique NameCBS51388_003092-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An04:460012..461928-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_003092-T1 ID=CBS51388_003092-T1|Name=CBS51388_003092-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1917bp|location=Sequence derived from alignment at An04:460012..461928- (Aspergillus niger CBS 513.88)
ATGGCCGCCGCCGATGTTCGCGACATGCTGGATCTGCCCGCGGAGGGCCA
GCCCCGACCTCATAAGAAACAGAAGGTCGTCGAGAAGCGTCCAGGTGGGC
TTCTCTTAGTTCCCTTACTCACCTAAAATTAAATCTGACACATTCCCATC
GCTAGAGGGTATCACCCGTGAGCTCTATGCTCTGCTAGGCGAACGAGCGC
CTCCGATCGCCATCAACGAGAACCGATACAAGGGACGTCCGAAATGGACG
AGCAAAAAGCGCGTACAGCCATGGTACGCACACATCACCATATCAACTGC
TCTCCGATATCAAACACTGACTCCATCAGGCGCATGACCCCCTTCATAAA
CAGCGCCCGCTCCGATGGCCTCGTTCTCCGCCACTGGCAACGCCAGCATG
AATCCGCCAAGGTCCCCGCGCTGGAGGGCTCCGAGATGGACGTGGACGAG
AAAGAGGACAACGCCGATGCCTCAACCTCCGATAACGTGCCGCAGCAAGA
CTCCCTATTCGCCAAATACAACATCAAAGCCCGCGTACCCAACCGCTACA
CAGACGAGGAATACAATCGCCATCTCAAGAACGACGACTGGACGCGCCAG
GAAACCGACTACCTCATGGACCTAGTCGAAGAATACGATCTCCGCTGGGT
CGTAATCGCCGATCGCTACGACTATCAACCGCACTCCGTCGATGGCGACA
GCAACAACGCCAGCGCCCTCGTCCCCGCAAAGCAATACCGAACCATGGAG
CAGATGAAATCGCGCTACTACTTCATCGCCGCGAGCATGCTCGCGCTCGA
GCACCCGCCCTCCGAGATGTCGGAAGCCGAATTCGAACTGCACGAAAAGA
TGCTCAAATTCGACGCCGACCGTGAACGCTCCCGCAAAGAACTCGCCGCC
CTCCAACTCAACCGCACAGCCGACGAAGTCCGCGAAGAAAGCGTCCTCCT
CGAAGAACTCAAACGCATCACCGCCAACGAGCAAGATTTCATCACGGAAC
GTCGCGAACTCTACTCCCGCCTTGAAGTCCCTATCAGCGTCGGCAACACA
ACCATGTACCAATCCAGCCAAGGCCTCTCGCAACTCCTCCAAACCCTCCT
CCAAGCCGACAAGAGCAAGAAACGCCGCTCCATCCTGGGCCCCGAAGGCG
GCGCCGCTCCCAGCCCCGCCGGCGCAACCCCGGCCCCCAACGCCCCCAGC
AGCGCCCGCGACAGCCGCGCCGACACCCCCAACGCGACGCCCGCCGCCGC
CCCAACCAACAAAAAGGCCGCCGCGGCAGCCGCAGCCGCAGCCGCAGCAG
CGAACAAAGAAGCGCAACAACAAGCCGTTCGGACCCTCACACCCGCCGAA
GAAGCCAAATACGGCGTGCAGCACCACGACCGACTGGCGCCGGGCGTGCA
ATTCCGCAGTGACCGCGCGCAGAAGCTCACACAGGCGAAATCGAATGTGC
AGACGCAGAAACTCGCTGCTGCGCTGGCGGAACTGGAGGTGCCGCTGCGG
CTTGTCATGCCGACGGAGCGTGTCTGCAAGGATTTTGAGAAGCTGATTCA
TTCGGTGAATCTGCTGCTGGAGGCGCGGAAGGTGTCGGAGAAGGTGGAGA
GTGAGATTCGGGTTTTGGAGGCTGCGAAGGAGGAACGTGAGAAGAAGGCG
AAGGAGGCGCTAGAGAAGGATAGTAAGCCTGAGGTCAAATCGGAGCAGCA
GGAGGATCAGCCACTTCCTGCGGCGGCGGCGGAGGAGGAGGAGGAGGCTG
CGGGTGCTGGGGATGCGGAGGGGCAGGAGAAGGGTGCAACAGATAAATCG
GGAGAGAAGGCAGAAGGTGGTGCTGCTGGTGAAGAGGGAGATGTGACTTC
GCATAAACGCTCTGCTAGTGTTCTGAGCAATGCTAGTGATAAGAGTACGA
AGCGGCAAAGGAAGTAA
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Coding sequence (CDS) from alignment at An04:460012..461928-

>CBS51388_003092-T1 ID=CBS51388_003092-T1|Name=CBS51388_003092-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5400bp|location=Sequence derived from alignment at An04:460012..461928- (Aspergillus niger CBS 513.88)
GCGCATGACCCCCTTCATAAACAGCGCCCGCTCCGATGGCCTCGTTCTCC
GCCACTGGCAACGCCAGCATGAATCCGCCAAGGTCCCCGCGCTGGAGGGC
TCCGAGATGGACGTGGACGAGAAAGAGGACAACGCCGATGCCTCAACCTC
CGATAACGTGCCGCAGCAAGACTCCCTATTCGCCAAATACAACATCAAAG
CCCGCGTACCCAACCGCTACACAGACGAGGAATACAATCGCCATCTCAAG
AACGACGACTGGACGCGCCAGGAAACCGACTACCTCATGGACCTAGTCGA
AGAATACGATCTCCGCTGGGTCGTAATCGCCGATCGCTACGACTATCAAC
CGCACTCCGTCGATGGCGACAGCAACAACGCCAGCGCCCTCGTCCCCGCA
AAGCAATACCGAACCATGGAGCAGATGAAATCGCGCTACTACTTCATCGC
CGCGAGCATGCTCGCGCTCGAGCACCCGCCCTCCGAGATGTCGGAAGCCG
AATTCGAACTGCACGAAAAGATGCTCAAATTCGACGCCGACCGTGAACGC
TCCCGCAAAGAACTCGCCGCCCTCCAACTCAACCGCACAGCCGACGAAGT
CCGCGAAGAAAGCGTCCTCCTCGAAGAACTCAAACGCATCACCGCCAACG
AGCAAGATTTCATCACGGAACGTCGCGAACTCTACTCCCGCCTTGAAGTC
CCTATCAGCGTCGGCAACACAACCATGTACCAATCCAGCCAAGGCCTCTC
GCAACTCCTCCAAACCCTCCTCCAAGCCGACAAGAGCAAGAAACGCCGCT
CCATCCTGGGCCCCGAAGGCGGCGCCGCTCCCAGCCCCGCCGGCGCAACC
CCGGCCCCCAACGCCCCCAGCAGCGCCCGCGACAGCCGCGCCGACACCCC
CAACGCGACGCCCGCCGCCGCCCCAACCAACAAAAAGGCCGCCGCGGCAG
CCGCAGCCGCAGCCGCAGCAGCGAACAAAGAAGCGCAACAACAAGCCGTT
CGGACCCTCACACCCGCCGAAGAAGCCAAATACGGCGTGCAGCACCACGA
CCGACTGGCGCCGGGCGTGCAATTCCGCAGTGACCGCGCGCAGAAGCTCA
CACAGGCGAAATCGAATGTGCAGACGCAGAAACTCGCTGCTGCGCTGGCG
GAACTGGAGGTGCCGCTGCGGCTTGTCATGCCGACGGAGCGTGTCTGCAA
GGATTTTGAGAAGCTGATTCATTCGGTGAATCTGCTGCTGGAGGCGCGGA
AGGTGTCGGAGAAGGTGGAGAGTGAGATTCGGGTTTTGGAGGCTGCGAAG
GAGGAACGTGAGAAGAAGGCGAAGGAGGCGCTAGAGAAGGATAGTAAGCC
TGAGGTCAAATCGGAGCAGCAGGAGGATCAGCCACTTCCTGCGGCGGCGG
CGGAGGAGGAGGAGGAGGCTGCGGGTGCTGGGGATGCGGAGGGGCAGGAG
AAGGGTGCAACAGATAAATCGGGAGAGAAGGCAGAAGGTGGTGCTGCTGG
TGAAGAGGGAGATGTGACTTCGCATAAACGCTCTGCTAGTGTTCTGAGCA
ATGCTAGTGATAAGAGTACGAAGCGGCAAAGGAAGTAAAGGGTATCACCC
GTGAGCTCTATGCTCTGCTAGGCGAACGAGCGCCTCCGATCGCCATCAAC
GAGAACCGATACAAGGGACGTCCGAAATGGACGAGCAAAAAGCGCGTACA
GCCATGATGGCCGCCGCCGATGTTCGCGACATGCTGGATCTGCCCGCGGA
GGGCCAGCCCCGACCTCATAAGAAACAGAAGGTCGTCGAGAAGCGTCCAG
GCGCATGACCCCCTTCATAAACAGCGCCCGCTCCGATGGCCTCGTTCTCC
GCCACTGGCAACGCCAGCATGAATCCGCCAAGGTCCCCGCGCTGGAGGGC
TCCGAGATGGACGTGGACGAGAAAGAGGACAACGCCGATGCCTCAACCTC
CGATAACGTGCCGCAGCAAGACTCCCTATTCGCCAAATACAACATCAAAG
CCCGCGTACCCAACCGCTACACAGACGAGGAATACAATCGCCATCTCAAG
AACGACGACTGGACGCGCCAGGAAACCGACTACCTCATGGACCTAGTCGA
AGAATACGATCTCCGCTGGGTCGTAATCGCCGATCGCTACGACTATCAAC
CGCACTCCGTCGATGGCGACAGCAACAACGCCAGCGCCCTCGTCCCCGCA
AAGCAATACCGAACCATGGAGCAGATGAAATCGCGCTACTACTTCATCGC
CGCGAGCATGCTCGCGCTCGAGCACCCGCCCTCCGAGATGTCGGAAGCCG
AATTCGAACTGCACGAAAAGATGCTCAAATTCGACGCCGACCGTGAACGC
TCCCGCAAAGAACTCGCCGCCCTCCAACTCAACCGCACAGCCGACGAAGT
CCGCGAAGAAAGCGTCCTCCTCGAAGAACTCAAACGCATCACCGCCAACG
AGCAAGATTTCATCACGGAACGTCGCGAACTCTACTCCCGCCTTGAAGTC
CCTATCAGCGTCGGCAACACAACCATGTACCAATCCAGCCAAGGCCTCTC
GCAACTCCTCCAAACCCTCCTCCAAGCCGACAAGAGCAAGAAACGCCGCT
CCATCCTGGGCCCCGAAGGCGGCGCCGCTCCCAGCCCCGCCGGCGCAACC
CCGGCCCCCAACGCCCCCAGCAGCGCCCGCGACAGCCGCGCCGACACCCC
CAACGCGACGCCCGCCGCCGCCCCAACCAACAAAAAGGCCGCCGCGGCAG
CCGCAGCCGCAGCCGCAGCAGCGAACAAAGAAGCGCAACAACAAGCCGTT
CGGACCCTCACACCCGCCGAAGAAGCCAAATACGGCGTGCAGCACCACGA
CCGACTGGCGCCGGGCGTGCAATTCCGCAGTGACCGCGCGCAGAAGCTCA
CACAGGCGAAATCGAATGTGCAGACGCAGAAACTCGCTGCTGCGCTGGCG
GAACTGGAGGTGCCGCTGCGGCTTGTCATGCCGACGGAGCGTGTCTGCAA
GGATTTTGAGAAGCTGATTCATTCGGTGAATCTGCTGCTGGAGGCGCGGA
AGGTGTCGGAGAAGGTGGAGAGTGAGATTCGGGTTTTGGAGGCTGCGAAG
GAGGAACGTGAGAAGAAGGCGAAGGAGGCGCTAGAGAAGGATAGTAAGCC
TGAGGTCAAATCGGAGCAGCAGGAGGATCAGCCACTTCCTGCGGCGGCGG
CGGAGGAGGAGGAGGAGGCTGCGGGTGCTGGGGATGCGGAGGGGCAGGAG
AAGGGTGCAACAGATAAATCGGGAGAGAAGGCAGAAGGTGGTGCTGCTGG
TGAAGAGGGAGATGTGACTTCGCATAAACGCTCTGCTAGTGTTCTGAGCA
ATGCTAGTGATAAGAGTACGAAGCGGCAAAGGAAGTAAAGGGTATCACCC
GTGAGCTCTATGCTCTGCTAGGCGAACGAGCGCCTCCGATCGCCATCAAC
GAGAACCGATACAAGGGACGTCCGAAATGGACGAGCAAAAAGCGCGTACA
GCCATGATGGCCGCCGCCGATGTTCGCGACATGCTGGATCTGCCCGCGGA
GGGCCAGCCCCGACCTCATAAGAAACAGAAGGTCGTCGAGAAGCGTCCAG
GCGCATGACCCCCTTCATAAACAGCGCCCGCTCCGATGGCCTCGTTCTCC
GCCACTGGCAACGCCAGCATGAATCCGCCAAGGTCCCCGCGCTGGAGGGC
TCCGAGATGGACGTGGACGAGAAAGAGGACAACGCCGATGCCTCAACCTC
CGATAACGTGCCGCAGCAAGACTCCCTATTCGCCAAATACAACATCAAAG
CCCGCGTACCCAACCGCTACACAGACGAGGAATACAATCGCCATCTCAAG
AACGACGACTGGACGCGCCAGGAAACCGACTACCTCATGGACCTAGTCGA
AGAATACGATCTCCGCTGGGTCGTAATCGCCGATCGCTACGACTATCAAC
CGCACTCCGTCGATGGCGACAGCAACAACGCCAGCGCCCTCGTCCCCGCA
AAGCAATACCGAACCATGGAGCAGATGAAATCGCGCTACTACTTCATCGC
CGCGAGCATGCTCGCGCTCGAGCACCCGCCCTCCGAGATGTCGGAAGCCG
AATTCGAACTGCACGAAAAGATGCTCAAATTCGACGCCGACCGTGAACGC
TCCCGCAAAGAACTCGCCGCCCTCCAACTCAACCGCACAGCCGACGAAGT
CCGCGAAGAAAGCGTCCTCCTCGAAGAACTCAAACGCATCACCGCCAACG
AGCAAGATTTCATCACGGAACGTCGCGAACTCTACTCCCGCCTTGAAGTC
CCTATCAGCGTCGGCAACACAACCATGTACCAATCCAGCCAAGGCCTCTC
GCAACTCCTCCAAACCCTCCTCCAAGCCGACAAGAGCAAGAAACGCCGCT
CCATCCTGGGCCCCGAAGGCGGCGCCGCTCCCAGCCCCGCCGGCGCAACC
CCGGCCCCCAACGCCCCCAGCAGCGCCCGCGACAGCCGCGCCGACACCCC
CAACGCGACGCCCGCCGCCGCCCCAACCAACAAAAAGGCCGCCGCGGCAG
CCGCAGCCGCAGCCGCAGCAGCGAACAAAGAAGCGCAACAACAAGCCGTT
CGGACCCTCACACCCGCCGAAGAAGCCAAATACGGCGTGCAGCACCACGA
CCGACTGGCGCCGGGCGTGCAATTCCGCAGTGACCGCGCGCAGAAGCTCA
CACAGGCGAAATCGAATGTGCAGACGCAGAAACTCGCTGCTGCGCTGGCG
GAACTGGAGGTGCCGCTGCGGCTTGTCATGCCGACGGAGCGTGTCTGCAA
GGATTTTGAGAAGCTGATTCATTCGGTGAATCTGCTGCTGGAGGCGCGGA
AGGTGTCGGAGAAGGTGGAGAGTGAGATTCGGGTTTTGGAGGCTGCGAAG
GAGGAACGTGAGAAGAAGGCGAAGGAGGCGCTAGAGAAGGATAGTAAGCC
TGAGGTCAAATCGGAGCAGCAGGAGGATCAGCCACTTCCTGCGGCGGCGG
CGGAGGAGGAGGAGGAGGCTGCGGGTGCTGGGGATGCGGAGGGGCAGGAG
AAGGGTGCAACAGATAAATCGGGAGAGAAGGCAGAAGGTGGTGCTGCTGG
TGAAGAGGGAGATGTGACTTCGCATAAACGCTCTGCTAGTGTTCTGAGCA
ATGCTAGTGATAAGAGTACGAAGCGGCAAAGGAAGTAAAGGGTATCACCC
GTGAGCTCTATGCTCTGCTAGGCGAACGAGCGCCTCCGATCGCCATCAAC
GAGAACCGATACAAGGGACGTCCGAAATGGACGAGCAAAAAGCGCGTACA
GCCATGATGGCCGCCGCCGATGTTCGCGACATGCTGGATCTGCCCGCGGA
GGGCCAGCCCCGACCTCATAAGAAACAGAAGGTCGTCGAGAAGCGTCCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0045892negative regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SWC4CBS51388_003092Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003092-T1CBS51388_003092-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003092-T1.cdsCBS51388_003092-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003092-T1.exon3CBS51388_003092-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_003092-T1.exon2CBS51388_003092-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_003092-T1.exon1CBS51388_003092-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG09262OLP
DBxrefInterPro:IPR017877
DBxrefInterPro:IPR008468
DBxrefInterPro:IPR032563
DBxrefPFAM:PF16282
DBxrefPFAM:PF05499
Productswr complex subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An04supercontigAn04:460012..461928 -
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