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CBS51388_003096-T1, CBS51388_003096-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_003096-T1
Unique NameCBS51388_003096-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An04:470418..472001+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_003096-T1 ID=CBS51388_003096-T1|Name=CBS51388_003096-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1584bp|location=Sequence derived from alignment at An04:470418..472001+ (Aspergillus niger CBS 513.88)
ATGAGCTCTCATGTCGTGGTTCTTGATGCAACAGCCCGACGAGCTACTAT
CAAGACGACACCTGGGAAACATCTAACTGATGTTTTACACGAAGCGTGTA
CAAAGCTAGGTGTGGATGCCAGCCAATATGGACTAAAGTAAGGTTCGACT
ATGCCCATCCTACGAAGTTCACAAGACTGACGGCTTTTGTCAAGATACAA
AGGTAAAGAGCTCGATCTTTCACTGGTATTTCGCCTCTCTGGGCTCACCT
CCGGCGCAAAGCTGGAGTTGGTTCAGCTCTCCCGTTCGCCCTCCGTCGTC
ACCGTCGCTCTACAACTGCCCGAATCTGAAGCACGAGGGGGGCCCCCAAA
CAGACGACTTTTGGATAAATTCCCCAGCACGACAACGATATGGCTAGTAT
TGCGCAAATTCGAGGCTGGAGTTGCTGGAGGTGCTCCGACCCGGAATATA
ACTGGAAGGGGTGTCCCTAGTGGCAATGAAGGCGCAGGGAGACTGTACTA
CGAAACTCCGGTCGTCCAGATTATGGAACGGGAACTCTCCTCGTTCACTG
ATCTGCAGAAATCTTTGGCACAGCTGGGATTCAACAACGGAAATGTGCTG
CTGAGGCTGAGCTTTCGTCGTACAGAGGAACCTTTGGAGGAGGCTATGGT
CAAGATTCAGGAGTACTTCAAACCGTTCGACGACGCGACCCCCAAGGCCG
AAGAACCGCCTGCACCTACAGAGCAACCACCACAGGCCGATGCATCCAAC
AAACAAGAGGGGGCACAGCAACAGCCCGCATCTACTTCCGAGGCACCTTC
TACCGCGGAACAAACCCCGCCAACTGCTCCTACATCCAATGCGCCTGCTG
CAGAGCCCACCGAAGTACCAGCTGGGTTCTCTCGACCCATAACCGTATTC
TCTCCCCCTTCCAACACTACACCACAGTCCGCACAAACGAACTACAACGA
GACCGACTACATCCCATCCATCGAACACGCACAAGCACATCAGCGACGAC
TTAATGCAACCTCCCGACCCCAACGCCTTCCCACGGACGCCGAAATCGCC
GCCAAAGCAGCCGCAGAAGAGGAACGGCTCGCCGCAGTCACTCAAGTAGA
CGTCAAGGTGCGTCTACCAGACCAAAGCCAAGTCGTGGCCAAGTTCGGAC
AAGAAGACACGGCCAAATCACTCTACGACTTTGTCCGAAACTGTCTTGCC
GCGCCATTCGCCAGCGAGAAATTTATCATCACGTCCTCCCTCCCCAAGAC
ATCTAGCGGAGGACAACCGGGGAGACATATCCAAAACGTCGTTCCCGACT
CAGACCAACAGCTGCTGATCAAGGATCTAGCCATGATCGGTCGTGTGCTA
GTCAACTTCACTTGGGATGCGAACGCATCCCCTGCCGCCCGGCAAAGCCG
GGAACTCTTGAAACCCGAACTACGGACACGCGCGCAGGAACTCAAGGTTG
AACAGCCCAAGGACGTAACAGATAACTCGGAAGTGAGCAGGCCGAAGCCG
ACAAGCACCGGGGATGAAACTCGCGGCGAGAAGCGGAAGCCAGGCGGCAT
GCCCAAATGGTTGAAACTACCAGGCAAGAAATGA
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Coding sequence (CDS) from alignment at An04:470418..472001+

>CBS51388_003096-T1 ID=CBS51388_003096-T1|Name=CBS51388_003096-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3054bp|location=Sequence derived from alignment at An04:470418..472001+ (Aspergillus niger CBS 513.88)
ATGAGCTCTCATGTCGTGGTTCTTGATGCAACAGCCCGACGAGCTACTAT
CAAGACGACACCTGGGAAACATCTAACTGATGTTTTACACGAAGCGTGTA
CAAAGCTAGGTGTGGATGCCAGCCAATATGGACTAAAATACAAAGGTAAA
GAGCTCGATCTTTCACTGGTATTTCGCCTCTCTGGGCTCACCTCCGGCGC
AAAGCTGGAGTTGGTTCAGCTCTCCCGTTCGCCCTCCGTCGTCACCGTCG
CTCTACAACTGCCCGAATCTGAAGCACGAGGGGGGCCCCCAAACAGACGA
CTTTTGGATAAATTCCCCAGCACGACAACGATATGGCTAGTATTGCGCAA
ATTCGAGGCTGGAGTTGCTGGAGGTGCTCCGACCCGGAATATAACTGGAA
GGGGTGTCCCTAGTGGCAATGAAGGCGCAGGGAGACTGTACTACGAAACT
CCGGTCGTCCAGATTATGGAACGGGAACTCTCCTCGTTCACTGATCTGCA
GAAATCTTTGGCACAGCTGGGATTCAACAACGGAAATGTGCTGCTGAGGC
TGAGCTTTCGTCGTACAGAGGAACCTTTGGAGGAGGCTATGGTCAAGATT
CAGGAGTACTTCAAACCGTTCGACGACGCGACCCCCAAGGCCGAAGAACC
GCCTGCACCTACAGAGCAACCACCACAGGCCGATGCATCCAACAAACAAG
AGGGGGCACAGCAACAGCCCGCATCTACTTCCGAGGCACCTTCTACCGCG
GAACAAACCCCGCCAACTGCTCCTACATCCAATGCGCCTGCTGCAGAGCC
CACCGAAGTACCAGCTGGGTTCTCTCGACCCATAACCGTATTCTCTCCCC
CTTCCAACACTACACCACAGTCCGCACAAACGAACTACAACGAGACCGAC
TACATCCCATCCATCGAACACGCACAAGCACATCAGCGACGACTTAATGC
AACCTCCCGACCCCAACGCCTTCCCACGGACGCCGAAATCGCCGCCAAAG
CAGCCGCAGAAGAGGAACGGCTCGCCGCAGTCACTCAAGTAGACGTCAAG
GTGCGTCTACCAGACCAAAGCCAAGTCGTGGCCAAGTTCGGACAAGAAGA
CACGGCCAAATCACTCTACGACTTTGTCCGAAACTGTCTTGCCGCGCCAT
TCGCCAGCGAGAAATTTATCATCACGTCCTCCCTCCCCAAGACATCTAGC
GGAGGACAACCGGGGAGACATATCCAAAACGTCGTTCCCGACTCAGACCA
ACAGCTGCTGATCAAGGATCTAGCCATGATCGGTCGTGTGCTAGTCAACT
TCACTTGGGATGCGAACGCATCCCCTGCCGCCCGGCAAAGCCGGGAACTC
TTGAAACCCGAACTACGGACACGCGCGCAGGAACTCAAGGTTGAACAGCC
CAAGGACGTAACAGATAACTCGGAAGTGAGCAGGCCGAAGCCGACAAGCA
CCGGGGATGAAACTCGCGGCGAGAAGCGGAAGCCAGGCGGCATGCCCAAA
TGGTTGAAACTACCAGGCAAGAAATGAATGAGCTCTCATGTCGTGGTTCT
TGATGCAACAGCCCGACGAGCTACTATCAAGACGACACCTGGGAAACATC
TAACTGATGTTTTACACGAAGCGTGTACAAAGCTAGGTGTGGATGCCAGC
CAATATGGACTAAAATACAAAGGTAAAGAGCTCGATCTTTCACTGGTATT
TCGCCTCTCTGGGCTCACCTCCGGCGCAAAGCTGGAGTTGGTTCAGCTCT
CCCGTTCGCCCTCCGTCGTCACCGTCGCTCTACAACTGCCCGAATCTGAA
GCACGAGGGGGGCCCCCAAACAGACGACTTTTGGATAAATTCCCCAGCAC
GACAACGATATGGCTAGTATTGCGCAAATTCGAGGCTGGAGTTGCTGGAG
GTGCTCCGACCCGGAATATAACTGGAAGGGGTGTCCCTAGTGGCAATGAA
GGCGCAGGGAGACTGTACTACGAAACTCCGGTCGTCCAGATTATGGAACG
GGAACTCTCCTCGTTCACTGATCTGCAGAAATCTTTGGCACAGCTGGGAT
TCAACAACGGAAATGTGCTGCTGAGGCTGAGCTTTCGTCGTACAGAGGAA
CCTTTGGAGGAGGCTATGGTCAAGATTCAGGAGTACTTCAAACCGTTCGA
CGACGCGACCCCCAAGGCCGAAGAACCGCCTGCACCTACAGAGCAACCAC
CACAGGCCGATGCATCCAACAAACAAGAGGGGGCACAGCAACAGCCCGCA
TCTACTTCCGAGGCACCTTCTACCGCGGAACAAACCCCGCCAACTGCTCC
TACATCCAATGCGCCTGCTGCAGAGCCCACCGAAGTACCAGCTGGGTTCT
CTCGACCCATAACCGTATTCTCTCCCCCTTCCAACACTACACCACAGTCC
GCACAAACGAACTACAACGAGACCGACTACATCCCATCCATCGAACACGC
ACAAGCACATCAGCGACGACTTAATGCAACCTCCCGACCCCAACGCCTTC
CCACGGACGCCGAAATCGCCGCCAAAGCAGCCGCAGAAGAGGAACGGCTC
GCCGCAGTCACTCAAGTAGACGTCAAGGTGCGTCTACCAGACCAAAGCCA
AGTCGTGGCCAAGTTCGGACAAGAAGACACGGCCAAATCACTCTACGACT
TTGTCCGAAACTGTCTTGCCGCGCCATTCGCCAGCGAGAAATTTATCATC
ACGTCCTCCCTCCCCAAGACATCTAGCGGAGGACAACCGGGGAGACATAT
CCAAAACGTCGTTCCCGACTCAGACCAACAGCTGCTGATCAAGGATCTAG
CCATGATCGGTCGTGTGCTAGTCAACTTCACTTGGGATGCGAACGCATCC
CCTGCCGCCCGGCAAAGCCGGGAACTCTTGAAACCCGAACTACGGACACG
CGCGCAGGAACTCAAGGTTGAACAGCCCAAGGACGTAACAGATAACTCGG
AAGTGAGCAGGCCGAAGCCGACAAGCACCGGGGATGAAACTCGCGGCGAG
AAGCGGAAGCCAGGCGGCATGCCCAAATGGTTGAAACTACCAGGCAAGAA
ATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_003096CBS51388_003096Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003096-T1.exon1CBS51388_003096-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_003096-T1.exon2CBS51388_003096-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003096-T1.cdsCBS51388_003096-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003096-T1CBS51388_003096-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029071
DBxrefInterPro:IPR021569
DBxrefInterPro:IPR001012
DBxrefPFAM:PF00789
DBxrefPFAM:PF11470
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An04supercontigAn04:470418..472001 +
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