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CBS51388_003103-T1, CBS51388_003103-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_003103-T1
Unique NameCBS51388_003103-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An04:492797..493545+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_003103-T1 ID=CBS51388_003103-T1|Name=CBS51388_003103-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=749bp|location=Sequence derived from alignment at An04:492797..493545+ (Aspergillus niger CBS 513.88)
ATGAGAGGCCCCACCATCCTCAAAGCCGAAGATGACAAGACAAAGCAGCT
GAATGAACACAACCTTATGGCCTTCTCGGGAGAGGCGGGAGACACAGGTT
CGTTGCAGCTTCCCCAGTGATCGGAGACGCGGAACCGCCATAAACTAGAT
AGCTAACCCGGAGCTCAATTAGTACAATTCGCGGAGTACATCCAAGCCAA
CATCCAACTATACACGATGCGGAACGATACGGAGCTGGGTCCGAGTGCGG
TTGCCAGCTTTGTCCGGGGAGAAATGGCGCGGAGTCTGCGGTCTCGGAAT
CCCTACACTGTCAACCTCCTGCTGGGAGGTGTCGATCCCATCACGCAGAA
GCCTCATCTATACTGGATTGATTATCTGGCATCATTGGCTCCCGTACCAT
ATGCTGCTCACGGCTATGCGCAGTAAGTGTGGGCGCTGAGTAACAGCGGT
CTCAAGCTGTTGGGATTCATGCTAAGGTGCTCTAGATACTACTGCCTGTC
CACTCTCGATAAACACCACCACCCCGACATCTCGCTCGAAGAAGGAATGA
AGCTCTTGGAAATGTGCACAGACGAATTGAAGCGCAGACTACCGATCGAT
TACAAGGGGGTATGTTACCAGAGTCATAGGCCCCGCAGTGCGAGCGAGTA
TGGGTAGCTGACAGCTTCTAGGTTCTGGTGAAGATCGTGACAAAGGACGG
CGTGCAAGAAGTACCATTCGATAATGACAGGATTGTCAAGAGTGCCTAA
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Coding sequence (CDS) from alignment at An04:492797..493545+

>CBS51388_003103-T1 ID=CBS51388_003103-T1|Name=CBS51388_003103-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2196bp|location=Sequence derived from alignment at An04:492797..493545+ (Aspergillus niger CBS 513.88)
ATGAGAGGCCCCACCATCCTCAAAGCCGAAGATGACAAGACAAAGCAGCT
GAATGAACACAACCTTATGGCCTTCTCGGGAGAGGCGGGAGACACAGTAC
AATTCGCGGAGTACATCCAAGCCAACATCCAACTATACACGATGCGGAAC
GATACGGAGCTGGGTCCGAGTGCGGTTGCCAGCTTTGTCCGGGGAGAAAT
GGCGCGGAGTCTGCGGTCTCGGAATCCCTACACTGTCAACCTCCTGCTGG
GAGGTGTCGATCCCATCACGCAGAAGCCTCATCTATACTGGATTGATTAT
CTGGCATCATTGGCTCCCGTACCATATGCTGCTCACGGCTATGCGCAATA
CTACTGCCTGTCCACTCTCGATAAACACCACCACCCCGACATCTCGCTCG
AAGAAGGAATGAAGCTCTTGGAAATGTGCACAGACGAATTGAAGCGCAGA
CTACCGATCGATTACAAGGGGGTTCTGGTGAAGATCGTGACAAAGGACGG
CGTGCAAGAAGTACCATTCGATAATGACAGGATTGTCAAGAGTGCCTAAA
TGAGAGGCCCCACCATCCTCAAAGCCGAAGATGACAAGACAAAGCAGCTG
AATGAACACAACCTTATGGCCTTCTCGGGAGAGGCGGGAGACACAGTACA
ATTCGCGGAGTACATCCAAGCCAACATCCAACTATACACGATGCGGAACG
ATACGGAGCTGGGTCCGAGTGCGGTTGCCAGCTTTGTCCGGGGAGAAATG
GCGCGGAGTCTGCGGTCTCGGAATCCCTACACTGTCAACCTCCTGCTGGG
AGGTGTCGATCCCATCACGCAGAAGCCTCATCTATACTGGATTGATTATC
TGGCATCATTGGCTCCCGTACCATATGCTGCTCACGGCTATGCGCAATAC
TACTGCCTGTCCACTCTCGATAAACACCACCACCCCGACATCTCGCTCGA
AGAAGGAATGAAGCTCTTGGAAATGTGCACAGACGAATTGAAGCGCAGAC
TACCGATCGATTACAAGGGGGTTCTGGTGAAGATCGTGACAAAGGACGGC
GTGCAAGAAGTACCATTCGATAATGACAGGATTGTCAAGAGTGCCTAAAT
GAGAGGCCCCACCATCCTCAAAGCCGAAGATGACAAGACAAAGCAGCTGA
ATGAACACAACCTTATGGCCTTCTCGGGAGAGGCGGGAGACACAGTACAA
TTCGCGGAGTACATCCAAGCCAACATCCAACTATACACGATGCGGAACGA
TACGGAGCTGGGTCCGAGTGCGGTTGCCAGCTTTGTCCGGGGAGAAATGG
CGCGGAGTCTGCGGTCTCGGAATCCCTACACTGTCAACCTCCTGCTGGGA
GGTGTCGATCCCATCACGCAGAAGCCTCATCTATACTGGATTGATTATCT
GGCATCATTGGCTCCCGTACCATATGCTGCTCACGGCTATGCGCAATACT
ACTGCCTGTCCACTCTCGATAAACACCACCACCCCGACATCTCGCTCGAA
GAAGGAATGAAGCTCTTGGAAATGTGCACAGACGAATTGAAGCGCAGACT
ACCGATCGATTACAAGGGGGTTCTGGTGAAGATCGTGACAAAGGACGGCG
TGCAAGAAGTACCATTCGATAATGACAGGATTGTCAAGAGTGCCTAAATG
AGAGGCCCCACCATCCTCAAAGCCGAAGATGACAAGACAAAGCAGCTGAA
TGAACACAACCTTATGGCCTTCTCGGGAGAGGCGGGAGACACAGTACAAT
TCGCGGAGTACATCCAAGCCAACATCCAACTATACACGATGCGGAACGAT
ACGGAGCTGGGTCCGAGTGCGGTTGCCAGCTTTGTCCGGGGAGAAATGGC
GCGGAGTCTGCGGTCTCGGAATCCCTACACTGTCAACCTCCTGCTGGGAG
GTGTCGATCCCATCACGCAGAAGCCTCATCTATACTGGATTGATTATCTG
GCATCATTGGCTCCCGTACCATATGCTGCTCACGGCTATGCGCAATACTA
CTGCCTGTCCACTCTCGATAAACACCACCACCCCGACATCTCGCTCGAAG
AAGGAATGAAGCTCTTGGAAATGTGCACAGACGAATTGAAGCGCAGACTA
CCGATCGATTACAAGGGGGTTCTGGTGAAGATCGTGACAAAGGACGGCGT
GCAAGAAGTACCATTCGATAATGACAGGATTGTCAAGAGTGCCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005839proteasome core complex
Vocabulary: Molecular Function
TermDefinition
GO:0004298threonine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0051603proteolysis involved in cellular protein catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PCB4CBS51388_003103Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003103-T1.exon1CBS51388_003103-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_003103-T1.exon2CBS51388_003103-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_003103-T1.exon3CBS51388_003103-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_003103-T1.exon4CBS51388_003103-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003103-T1.cdsCBS51388_003103-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003103-T1CBS51388_003103-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteMEROPS:MER0002676
DBxrefInterPro:IPR035206
DBxrefInterPro:IPR023333
DBxrefInterPro:IPR029055
DBxrefInterPro:IPR001353
DBxrefPFAM:PF00227
ProductProbable proteasome subunit beta type-4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An04supercontigAn04:492797..493545 +
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