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CBS51388_003104-T1, CBS51388_003104-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_003104-T1
Unique NameCBS51388_003104-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An04:493923..495827+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_003104-T1 ID=CBS51388_003104-T1|Name=CBS51388_003104-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1905bp|location=Sequence derived from alignment at An04:493923..495827+ (Aspergillus niger CBS 513.88)
ATGTCGAAGAGACAAGCTGAGCTGTCGCTCGAGGAAGAGCTCGCAGCAGG
CTCTCCTGCCTCGAAGAAAGCGCGTGTGGAGGACGAAGAGCTGCCGGAGG
ACGACCCGCGCCGTGGAGCTTTGCCGATTCGCCGGGCGACTGGACAGCAA
CTTGAAGAACATGAGCGCAGCGGACAAGATATTCTTGCAGCTGCTGATCA
GGAAGGCGAAGAGCTAGCGGAAGCAGCGCAAGATGGAGGCCCCGAATCGT
CCGATATTGATGCTGATGACGACAAACCGGTTATCGCGGCCCCGAAACGT
CAGAGCGCCCCCATGGAGGGCTACAGCGACCTGTACCTCGATACGATCAA
TCGCGAAATCCTCGACTTCGATTTTGAAAAGCTATGCTCGGTCAGCTTGT
CGAATATTAATGTGTACGCTTGTCTGGTGTGCGGCAAATACTTCCAGGGC
AGAGGACCGAAGTCGCATGCTTATTTCCATGCGCTTGAGGTCGGACACCA
TGTTTTCGTCAATATGGGTACTAAAAAGGTCTACGTTCTCCCGGAAGGCT
ATGAGGTTAAGAACCAGAGCTTGGACGATATCAAATACGTGGTGGACCCG
TACTACAGCAAGGATGAGGTGATGAAGCTGGACAAGGAAGTACACGACGC
ATTCGACCTGGCAGGAAACCGTTATAGGCCTGGTAAGACACTCAGACTGT
TTATATTGCTAAAGACAATGTGTTAATCATTTGCAGGTTTTGTTGGCATG
AATAACATCAAAGCCAACGATTATCTGAACGTGGTGGTCCAGCTCTTAGC
TCACGTCTTCCCCATTCGCAATTACTTCCTGCTGCATGAATTCCCTCAAC
CAGGAACGCCTCAATTAGCACTCCGCTTCAGTACCCTAGTCCGAAAACTA
TGGAACCCTAAGGCATTTCGCTCCCATGTATCTCCGCACGAACTGTTGCA
GGAGATCGCTCTCCGCTCATCCAAGCGCTTTACCCTCACACAGCAGTCCG
ATCCAGTGGAGTTCATGTCGTGGTTCTTGAACAACCTCCACCTCTCTCTT
GGAGGGTCCAAGAAACCATCCAAGACACCTACAAGCGTTGTACAAGCCGC
ATTCCAGGGTCACTTGAGGATCGAAAGCCAGGCTATCACAGCCCATTCAG
ATACCCAAAACGCGCGTCTAGTTTTCACCGAATCCGGCTCCATCAACAGC
CAAACGACACCCTTCCTCATCCTCACCTTAGACCTACCACCCACGCCCCT
TTTCCAATCCGCGAACCGGGAATCTATCATCCCGCAAGTCCCTCTGACTA
CCCTCCTGAACAAGTACAACGGAATCACCGCCTCCGAAAAACTCGCCCAC
AGAGTCCGCCACAGGCTCCTCCACCCCCTTCCTCCCTACCTCCTCTTCCA
CATCAAGCGCTTCAGCAAGAACCGCTTCGTCTCCGAACGTAACCCCACAA
TCGTGACCTTCCCATCCCCTCGCTCATTAGACATGTCGCCCTATGTTGAG
CCAAACCCAGAGATCTGGCCTCCAGGGGAACCGATCCTCTACGATCTCGT
CGCAAACATCATCCTCGACCCTACTGTCGCCGCTCCAGGTGCTCACGAGG
AAGCCGCAGCAGACAAAGGAGTCAATGCTGCTAGCGGAAAAGCTTCGTCA
GGAGCTGGAGCTGGCAGCGAGAAAGTCTCCTGGCTTGTTCAGTTGCATGA
TAAAGCTATGTCTGCGGAGAATGGTCGGCTTCAGAAAGAACATGCTGGCG
AGCAGCGTGGACCCGAGTGGCTGGAGATTCAGGATCTGTTTGTCAAGCGA
GCAGAAAGCGAAACTTTGTTCACGAAGGAAGGGTACTTGATGGTATGGGA
ACGTCGAAAGGTTCCTGGCGTGCCGAATCGTAAGGGGAAGAATCCGGCTA
AGTGA
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Coding sequence (CDS) from alignment at An04:493923..495827+

>CBS51388_003104-T1 ID=CBS51388_003104-T1|Name=CBS51388_003104-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3702bp|location=Sequence derived from alignment at An04:493923..495827+ (Aspergillus niger CBS 513.88)
ATGTCGAAGAGACAAGCTGAGCTGTCGCTCGAGGAAGAGCTCGCAGCAGG
CTCTCCTGCCTCGAAGAAAGCGCGTGTGGAGGACGAAGAGCTGCCGGAGG
ACGACCCGCGCCGTGGAGCTTTGCCGATTCGCCGGGCGACTGGACAGCAA
CTTGAAGAACATGAGCGCAGCGGACAAGATATTCTTGCAGCTGCTGATCA
GGAAGGCGAAGAGCTAGCGGAAGCAGCGCAAGATGGAGGCCCCGAATCGT
CCGATATTGATGCTGATGACGACAAACCGGTTATCGCGGCCCCGAAACGT
CAGAGCGCCCCCATGGAGGGCTACAGCGACCTGTACCTCGATACGATCAA
TCGCGAAATCCTCGACTTCGATTTTGAAAAGCTATGCTCGGTCAGCTTGT
CGAATATTAATGTGTACGCTTGTCTGGTGTGCGGCAAATACTTCCAGGGC
AGAGGACCGAAGTCGCATGCTTATTTCCATGCGCTTGAGGTCGGACACCA
TGTTTTCGTCAATATGGGTACTAAAAAGGTCTACGTTCTCCCGGAAGGCT
ATGAGGTTAAGAACCAGAGCTTGGACGATATCAAATACGTGGTGGACCCG
TACTACAGCAAGGATGAGGTGATGAAGCTGGACAAGGAAGTACACGACGC
ATTCGACCTGGCAGGAAACCGTTATAGGCCTGGTTTTGTTGGCATGAATA
ACATCAAAGCCAACGATTATCTGAACGTGGTGGTCCAGCTCTTAGCTCAC
GTCTTCCCCATTCGCAATTACTTCCTGCTGCATGAATTCCCTCAACCAGG
AACGCCTCAATTAGCACTCCGCTTCAGTACCCTAGTCCGAAAACTATGGA
ACCCTAAGGCATTTCGCTCCCATGTATCTCCGCACGAACTGTTGCAGGAG
ATCGCTCTCCGCTCATCCAAGCGCTTTACCCTCACACAGCAGTCCGATCC
AGTGGAGTTCATGTCGTGGTTCTTGAACAACCTCCACCTCTCTCTTGGAG
GGTCCAAGAAACCATCCAAGACACCTACAAGCGTTGTACAAGCCGCATTC
CAGGGTCACTTGAGGATCGAAAGCCAGGCTATCACAGCCCATTCAGATAC
CCAAAACGCGCGTCTAGTTTTCACCGAATCCGGCTCCATCAACAGCCAAA
CGACACCCTTCCTCATCCTCACCTTAGACCTACCACCCACGCCCCTTTTC
CAATCCGCGAACCGGGAATCTATCATCCCGCAAGTCCCTCTGACTACCCT
CCTGAACAAGTACAACGGAATCACCGCCTCCGAAAAACTCGCCCACAGAG
TCCGCCACAGGCTCCTCCACCCCCTTCCTCCCTACCTCCTCTTCCACATC
AAGCGCTTCAGCAAGAACCGCTTCGTCTCCGAACGTAACCCCACAATCGT
GACCTTCCCATCCCCTCGCTCATTAGACATGTCGCCCTATGTTGAGCCAA
ACCCAGAGATCTGGCCTCCAGGGGAACCGATCCTCTACGATCTCGTCGCA
AACATCATCCTCGACCCTACTGTCGCCGCTCCAGGTGCTCACGAGGAAGC
CGCAGCAGACAAAGGAGTCAATGCTGCTAGCGGAAAAGCTTCGTCAGGAG
CTGGAGCTGGCAGCGAGAAAGTCTCCTGGCTTGTTCAGTTGCATGATAAA
GCTATGTCTGCGGAGAATGGTCGGCTTCAGAAAGAACATGCTGGCGAGCA
GCGTGGACCCGAGTGGCTGGAGATTCAGGATCTGTTTGTCAAGCGAGCAG
AAAGCGAAACTTTGTTCACGAAGGAAGGGTACTTGATGGTATGGGAACGT
CGAAAGGTTCCTGGCGTGCCGAATCGTAAGGGGAAGAATCCGGCTAAGTG
AATGTCGAAGAGACAAGCTGAGCTGTCGCTCGAGGAAGAGCTCGCAGCAG
GCTCTCCTGCCTCGAAGAAAGCGCGTGTGGAGGACGAAGAGCTGCCGGAG
GACGACCCGCGCCGTGGAGCTTTGCCGATTCGCCGGGCGACTGGACAGCA
ACTTGAAGAACATGAGCGCAGCGGACAAGATATTCTTGCAGCTGCTGATC
AGGAAGGCGAAGAGCTAGCGGAAGCAGCGCAAGATGGAGGCCCCGAATCG
TCCGATATTGATGCTGATGACGACAAACCGGTTATCGCGGCCCCGAAACG
TCAGAGCGCCCCCATGGAGGGCTACAGCGACCTGTACCTCGATACGATCA
ATCGCGAAATCCTCGACTTCGATTTTGAAAAGCTATGCTCGGTCAGCTTG
TCGAATATTAATGTGTACGCTTGTCTGGTGTGCGGCAAATACTTCCAGGG
CAGAGGACCGAAGTCGCATGCTTATTTCCATGCGCTTGAGGTCGGACACC
ATGTTTTCGTCAATATGGGTACTAAAAAGGTCTACGTTCTCCCGGAAGGC
TATGAGGTTAAGAACCAGAGCTTGGACGATATCAAATACGTGGTGGACCC
GTACTACAGCAAGGATGAGGTGATGAAGCTGGACAAGGAAGTACACGACG
CATTCGACCTGGCAGGAAACCGTTATAGGCCTGGTTTTGTTGGCATGAAT
AACATCAAAGCCAACGATTATCTGAACGTGGTGGTCCAGCTCTTAGCTCA
CGTCTTCCCCATTCGCAATTACTTCCTGCTGCATGAATTCCCTCAACCAG
GAACGCCTCAATTAGCACTCCGCTTCAGTACCCTAGTCCGAAAACTATGG
AACCCTAAGGCATTTCGCTCCCATGTATCTCCGCACGAACTGTTGCAGGA
GATCGCTCTCCGCTCATCCAAGCGCTTTACCCTCACACAGCAGTCCGATC
CAGTGGAGTTCATGTCGTGGTTCTTGAACAACCTCCACCTCTCTCTTGGA
GGGTCCAAGAAACCATCCAAGACACCTACAAGCGTTGTACAAGCCGCATT
CCAGGGTCACTTGAGGATCGAAAGCCAGGCTATCACAGCCCATTCAGATA
CCCAAAACGCGCGTCTAGTTTTCACCGAATCCGGCTCCATCAACAGCCAA
ACGACACCCTTCCTCATCCTCACCTTAGACCTACCACCCACGCCCCTTTT
CCAATCCGCGAACCGGGAATCTATCATCCCGCAAGTCCCTCTGACTACCC
TCCTGAACAAGTACAACGGAATCACCGCCTCCGAAAAACTCGCCCACAGA
GTCCGCCACAGGCTCCTCCACCCCCTTCCTCCCTACCTCCTCTTCCACAT
CAAGCGCTTCAGCAAGAACCGCTTCGTCTCCGAACGTAACCCCACAATCG
TGACCTTCCCATCCCCTCGCTCATTAGACATGTCGCCCTATGTTGAGCCA
AACCCAGAGATCTGGCCTCCAGGGGAACCGATCCTCTACGATCTCGTCGC
AAACATCATCCTCGACCCTACTGTCGCCGCTCCAGGTGCTCACGAGGAAG
CCGCAGCAGACAAAGGAGTCAATGCTGCTAGCGGAAAAGCTTCGTCAGGA
GCTGGAGCTGGCAGCGAGAAAGTCTCCTGGCTTGTTCAGTTGCATGATAA
AGCTATGTCTGCGGAGAATGGTCGGCTTCAGAAAGAACATGCTGGCGAGC
AGCGTGGACCCGAGTGGCTGGAGATTCAGGATCTGTTTGTCAAGCGAGCA
GAAAGCGAAACTTTGTTCACGAAGGAAGGGTACTTGATGGTATGGGAACG
TCGAAAGGTTCCTGGCGTGCCGAATCGTAAGGGGAAGAATCCGGCTAAGT
GA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006397mRNA processing
GO:0000245spliceosomal complex assembly
GO:0016579protein deubiquitination
Vocabulary: Molecular Function
TermDefinition
GO:0004843thiol-dependent ubiquitin-specific protease activity
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_003104CBS51388_003104Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003104-T1.exon1CBS51388_003104-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_003104-T1.exon2CBS51388_003104-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003104-T1.cdsCBS51388_003104-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003104-T1CBS51388_003104-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262QL6
NoteMEROPS:MER0064621
DBxrefInterPro:IPR038765
DBxrefInterPro:IPR033809
DBxrefInterPro:IPR028889
DBxrefInterPro:IPR013083
DBxrefInterPro:IPR001394
DBxrefInterPro:IPR001607
DBxrefPFAM:PF02148
DBxrefPFAM:PF00443
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An04supercontigAn04:493923..495827 +
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