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CBS51388_003109-T1, CBS51388_003109-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_003109-T1
Unique NameCBS51388_003109-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An04:510779..512371+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_003109-T1 ID=CBS51388_003109-T1|Name=CBS51388_003109-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1593bp|location=Sequence derived from alignment at An04:510779..512371+ (Aspergillus niger CBS 513.88)
ATGGTAAAGAGAAAGAGAGACGAGGCGGCCAAGGACCGCCAGAGCTCTAC
GCAGCCAACCAAGGTTGCTAAGGCTACAGACAGTGAAGAGGCTCCTTCCA
CCTCAGCGGCCGACGGTCCGTCAATCACGCTGCAAATTATCACCGGATCC
TATGAAAAGGTGCTGCACGGCTTTACCGCGGCTGTATCGCCTACCTCTTT
TGCATCAAAGGATACGGATGAAGATGGCAATAAGTCAACTCTTGTACAGT
TTGTGGATACATTCCTGTTTGAGGCTCATACATCTGCCATTCGGTGTCTC
GCCTTGTCGCCATTGCCGAAGGCTGATGCAACAGAAAACGCTCAAATTAT
CCTAGCCAGTGGTGCTACAGATGAGCGTGTCAATCTTTACTCTCTGTCTG
CTGCTCCTGTTGCAGTGAATGAATTATATCCCACCGTACCGACTCTCGCG
GGGAACAAAATCCTCGAGAATCCCAAAAACCGCGAGTTGGGCACACTGAT
GCATCACTCCGCTCCGATTTCGGCTTTGGAATTTCCCTCCCGATCAAAGA
TCCTTGTTGGCTCTGAGGATAATACAATTTCTGTTACTAGGACTCGGGAT
TTCTCTGTGGTATCCACCATCAAGGCCCCTCGTCCGAAAGTTCAGGGTAG
GCCCAGCGGTGACACAGCGCCCCCCGGAGGCACCCCGTCCGGTGTCAATG
ATATCGCTGTCCATCCTAGTATGAAGTTGATGTTGAGTGTGGGCAAGGGA
GAAAAGTGCATGAGGCTCTGGAACCTGGTCACAGGGAAGAAGGCTGGTGT
GTTGAACTTCAACCGAGAGATTTTGCAGAGCGTCAAGGAGGGCAAATGGA
GCACTGGGGAAGGAAGGAAGATAGTATGGAACTCGAAGGGTGATGAGTTT
GCTGTGGCATTCGAGTGGGGCGCAGTTGTCTTCGGAATTGTAAGCCTGAT
GTCGCATATCCCATTGCATGACCATTTCTAACATAGTCTACAGGATTCCA
CTCCCATTTGCAGGGTTTTCCCCAGCCCCCGGAGTAAGCTTCACCAGATG
AAGTACATAAATCCCACGCCCTCTTCCGATGACAGCGATGAATTGCTCGC
CGTCTCCACGGAAGATGGTAGGGTTATTTTCTACTCTACTAAGCAGGTCC
AAGAGGCGACAGAGGAGGATGATTCACCCATTCCTTATGCGGAAGCTGTT
GCCCAGCTGGGTGGTAGAGCAGCAGGCTTCCCGGGAAGAGTAAAGGACTT
CGAGGTTCTTGATCTAAACGGTCAGCGGGTTGCTGGAAAGGATAACCACC
TGGTAGTAACTGGAAATAGCGAGGGCTTGGTTCGTGTTTGGCTGCTACAA
GGCGCCGATCTGGTGAAGAAGGATACAAAGGGTACCAAAAAGAAGTCGGC
AGAGAAGGAGAAGAAGGAAATCCAGGTCGGTAAGTTCTTGAATGCTTATG
GCACAGGCAACCGGATTACCTGCCTCAAAGCATTTGTGATGCTGGCTCCT
GAAGACCCCTCGACGCTAGAGGATTCGGAAGAGGATTATGATGAAGAAGT
GAGCCAGGATGAATCCTCCAGCGAAGAGAGCGATGAAGAATAG
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Coding sequence (CDS) from alignment at An04:510779..512371+

>CBS51388_003109-T1 ID=CBS51388_003109-T1|Name=CBS51388_003109-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3078bp|location=Sequence derived from alignment at An04:510779..512371+ (Aspergillus niger CBS 513.88)
ATGGTAAAGAGAAAGAGAGACGAGGCGGCCAAGGACCGCCAGAGCTCTAC
GCAGCCAACCAAGGTTGCTAAGGCTACAGACAGTGAAGAGGCTCCTTCCA
CCTCAGCGGCCGACGGTCCGTCAATCACGCTGCAAATTATCACCGGATCC
TATGAAAAGGTGCTGCACGGCTTTACCGCGGCTGTATCGCCTACCTCTTT
TGCATCAAAGGATACGGATGAAGATGGCAATAAGTCAACTCTTGTACAGT
TTGTGGATACATTCCTGTTTGAGGCTCATACATCTGCCATTCGGTGTCTC
GCCTTGTCGCCATTGCCGAAGGCTGATGCAACAGAAAACGCTCAAATTAT
CCTAGCCAGTGGTGCTACAGATGAGCGTGTCAATCTTTACTCTCTGTCTG
CTGCTCCTGTTGCAGTGAATGAATTATATCCCACCGTACCGACTCTCGCG
GGGAACAAAATCCTCGAGAATCCCAAAAACCGCGAGTTGGGCACACTGAT
GCATCACTCCGCTCCGATTTCGGCTTTGGAATTTCCCTCCCGATCAAAGA
TCCTTGTTGGCTCTGAGGATAATACAATTTCTGTTACTAGGACTCGGGAT
TTCTCTGTGGTATCCACCATCAAGGCCCCTCGTCCGAAAGTTCAGGGTAG
GCCCAGCGGTGACACAGCGCCCCCCGGAGGCACCCCGTCCGGTGTCAATG
ATATCGCTGTCCATCCTAGTATGAAGTTGATGTTGAGTGTGGGCAAGGGA
GAAAAGTGCATGAGGCTCTGGAACCTGGTCACAGGGAAGAAGGCTGGTGT
GTTGAACTTCAACCGAGAGATTTTGCAGAGCGTCAAGGAGGGCAAATGGA
GCACTGGGGAAGGAAGGAAGATAGTATGGAACTCGAAGGGTGATGAGTTT
GCTGTGGCATTCGAGTGGGGCGCAGTTGTCTTCGGAATTGATTCCACTCC
CATTTGCAGGGTTTTCCCCAGCCCCCGGAGTAAGCTTCACCAGATGAAGT
ACATAAATCCCACGCCCTCTTCCGATGACAGCGATGAATTGCTCGCCGTC
TCCACGGAAGATGGTAGGGTTATTTTCTACTCTACTAAGCAGGTCCAAGA
GGCGACAGAGGAGGATGATTCACCCATTCCTTATGCGGAAGCTGTTGCCC
AGCTGGGTGGTAGAGCAGCAGGCTTCCCGGGAAGAGTAAAGGACTTCGAG
GTTCTTGATCTAAACGGTCAGCGGGTTGCTGGAAAGGATAACCACCTGGT
AGTAACTGGAAATAGCGAGGGCTTGGTTCGTGTTTGGCTGCTACAAGGCG
CCGATCTGGTGAAGAAGGATACAAAGGGTACCAAAAAGAAGTCGGCAGAG
AAGGAGAAGAAGGAAATCCAGGTCGGTAAGTTCTTGAATGCTTATGGCAC
AGGCAACCGGATTACCTGCCTCAAAGCATTTGTGATGCTGGCTCCTGAAG
ACCCCTCGACGCTAGAGGATTCGGAAGAGGATTATGATGAAGAAGTGAGC
CAGGATGAATCCTCCAGCGAAGAGAGCGATGAAGAATAGATGGTAAAGAG
AAAGAGAGACGAGGCGGCCAAGGACCGCCAGAGCTCTACGCAGCCAACCA
AGGTTGCTAAGGCTACAGACAGTGAAGAGGCTCCTTCCACCTCAGCGGCC
GACGGTCCGTCAATCACGCTGCAAATTATCACCGGATCCTATGAAAAGGT
GCTGCACGGCTTTACCGCGGCTGTATCGCCTACCTCTTTTGCATCAAAGG
ATACGGATGAAGATGGCAATAAGTCAACTCTTGTACAGTTTGTGGATACA
TTCCTGTTTGAGGCTCATACATCTGCCATTCGGTGTCTCGCCTTGTCGCC
ATTGCCGAAGGCTGATGCAACAGAAAACGCTCAAATTATCCTAGCCAGTG
GTGCTACAGATGAGCGTGTCAATCTTTACTCTCTGTCTGCTGCTCCTGTT
GCAGTGAATGAATTATATCCCACCGTACCGACTCTCGCGGGGAACAAAAT
CCTCGAGAATCCCAAAAACCGCGAGTTGGGCACACTGATGCATCACTCCG
CTCCGATTTCGGCTTTGGAATTTCCCTCCCGATCAAAGATCCTTGTTGGC
TCTGAGGATAATACAATTTCTGTTACTAGGACTCGGGATTTCTCTGTGGT
ATCCACCATCAAGGCCCCTCGTCCGAAAGTTCAGGGTAGGCCCAGCGGTG
ACACAGCGCCCCCCGGAGGCACCCCGTCCGGTGTCAATGATATCGCTGTC
CATCCTAGTATGAAGTTGATGTTGAGTGTGGGCAAGGGAGAAAAGTGCAT
GAGGCTCTGGAACCTGGTCACAGGGAAGAAGGCTGGTGTGTTGAACTTCA
ACCGAGAGATTTTGCAGAGCGTCAAGGAGGGCAAATGGAGCACTGGGGAA
GGAAGGAAGATAGTATGGAACTCGAAGGGTGATGAGTTTGCTGTGGCATT
CGAGTGGGGCGCAGTTGTCTTCGGAATTGATTCCACTCCCATTTGCAGGG
TTTTCCCCAGCCCCCGGAGTAAGCTTCACCAGATGAAGTACATAAATCCC
ACGCCCTCTTCCGATGACAGCGATGAATTGCTCGCCGTCTCCACGGAAGA
TGGTAGGGTTATTTTCTACTCTACTAAGCAGGTCCAAGAGGCGACAGAGG
AGGATGATTCACCCATTCCTTATGCGGAAGCTGTTGCCCAGCTGGGTGGT
AGAGCAGCAGGCTTCCCGGGAAGAGTAAAGGACTTCGAGGTTCTTGATCT
AAACGGTCAGCGGGTTGCTGGAAAGGATAACCACCTGGTAGTAACTGGAA
ATAGCGAGGGCTTGGTTCGTGTTTGGCTGCTACAAGGCGCCGATCTGGTG
AAGAAGGATACAAAGGGTACCAAAAAGAAGTCGGCAGAGAAGGAGAAGAA
GGAAATCCAGGTCGGTAAGTTCTTGAATGCTTATGGCACAGGCAACCGGA
TTACCTGCCTCAAAGCATTTGTGATGCTGGCTCCTGAAGACCCCTCGACG
CTAGAGGATTCGGAAGAGGATTATGATGAAGAAGTGAGCCAGGATGAATC
CTCCAGCGAAGAGAGCGATGAAGAATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_003109CBS51388_003109Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003109-T1.exon1CBS51388_003109-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_003109-T1.exon2CBS51388_003109-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003109-T1.cdsCBS51388_003109-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003109-T1CBS51388_003109-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An04supercontigAn04:510779..512371 +
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