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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:528945..529542- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003117-T1 ID=CBS51388_003117-T1|Name=CBS51388_003117-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=598bp|location=Sequence derived from alignment at An04:528945..529542- (Aspergillus niger CBS 513.88)
ATGGTATGTGTTAATGTTATTTCGATCTGAGAATACCCTCAATGGGCGGC
TAACAAGCAATCAGGTTTTCATTTTGGGCGTGAACTTCCCCGAGCGAAAC
CTCGTCAAGGCAAGCAACTCCGAACTTCCATTTTACCTTCAACGCCTGGT
CTGACTGAAATCAGAAATCGCTCGAGTCCTTCTTCGGCATCGGTAACTTG
ACCTCGACCCGTCTCCTTGCCCGCTTCCATATCCACCCAACATGCAAGGT
TGGCGACTTGGCGAACAAGCAGGTCCTCGACATCACGGCCGCCTTGTCCG
ACATGAAGATTGAGAACGATCTCCGCAGACAGTACCTCGATAACATCAAG
CGTTTGAAGGAGACAGGAACCTACCGTGGTCGGCGTCATGCGCTCGGCTT
GCCCGTTCGGGGACAGCGGACGAGGAGCCAGGTAGGTTTATTCCTATATC
CAGTTTCCCCCAATATGATACTAGGGAATGTTGAAGCACTTCGCTGGTGG
ACGTGGTCGTGGGGTATTGCACAAAAGAAGATTTATACTAACGTAATCAC
CAGATCAAAACTGCTGTCAAGCTCAACCGTATGGAGAGAAGACTGTGA back to topCoding sequence (CDS) from alignment at An04:528945..529542- >CBS51388_003117-T1 ID=CBS51388_003117-T1|Name=CBS51388_003117-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=945bp|location=Sequence derived from alignment at An04:528945..529542- (Aspergillus niger CBS 513.88)
ATCAAAACTGCTGTCAAGCTCAACCGTATGGAGAGAAGACTGTGAAAATC
GCTCGAGTCCTTCTTCGGCATCGGTAACTTGACCTCGACCCGTCTCCTTG
CCCGCTTCCATATCCACCCAACATGCAAGGTTGGCGACTTGGCGAACAAG
CAGGTCCTCGACATCACGGCCGCCTTGTCCGACATGAAGATTGAGAACGA
TCTCCGCAGACAGTACCTCGATAACATCAAGCGTTTGAAGGAGACAGGAA
CCTACCGTGGTCGGCGTCATGCGCTCGGCTTGCCCGTTCGGGGACAGCGG
ACGAGGAGCCAGATGATCAAAACTGCTGTCAAGCTCAACCGTATGGAGAG
AAGACTGTGAAAATCGCTCGAGTCCTTCTTCGGCATCGGTAACTTGACCT
CGACCCGTCTCCTTGCCCGCTTCCATATCCACCCAACATGCAAGGTTGGC
GACTTGGCGAACAAGCAGGTCCTCGACATCACGGCCGCCTTGTCCGACAT
GAAGATTGAGAACGATCTCCGCAGACAGTACCTCGATAACATCAAGCGTT
TGAAGGAGACAGGAACCTACCGTGGTCGGCGTCATGCGCTCGGCTTGCCC
GTTCGGGGACAGCGGACGAGGAGCCAGATGATCAAAACTGCTGTCAAGCT
CAACCGTATGGAGAGAAGACTGTGAAAATCGCTCGAGTCCTTCTTCGGCA
TCGGTAACTTGACCTCGACCCGTCTCCTTGCCCGCTTCCATATCCACCCA
ACATGCAAGGTTGGCGACTTGGCGAACAAGCAGGTCCTCGACATCACGGC
CGCCTTGTCCGACATGAAGATTGAGAACGATCTCCGCAGACAGTACCTCG
ATAACATCAAGCGTTTGAAGGAGACAGGAACCTACCGTGGTCGGCGTCAT
GCGCTCGGCTTGCCCGTTCGGGGACAGCGGACGAGGAGCCAGATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0003723 | RNA binding |
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR010979 |
| DBxref | InterPro:IPR018269 |
| DBxref | InterPro:IPR001892 |
| DBxref | InterPro:IPR027437 |
| DBxref | PFAM:PF00416 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:528945..529542 - |
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