You are here

Home

CBS51388_003121-T1, CBS51388_003121-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_003121-T1
Unique NameCBS51388_003121-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An04:542516..543626+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_003121-T1 ID=CBS51388_003121-T1|Name=CBS51388_003121-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1111bp|location=Sequence derived from alignment at An04:542516..543626+ (Aspergillus niger CBS 513.88)
ATGTCTGACGAGCCTACGATCCTTCGCCCGCGTCCGCGACGTGTGTTCGA
TCTCACGCCTGAAGAGCCCTCTACCCCAGTCGAACCCGCCAACCCAGACC
TGCTCGTCCCTAAAGATGCCGGCTCTACCAGCGTCAGCCGCAATGCTTCG
ATCATGAACTTGACCTCGTCGACGCTGTACGGTATTTACTCTCCTACTGC
ATTCGACAGTTCTCGTGACGACTCGAGTCCCTGGGGCACGGAAGCCCATA
CGCCTCAATCAGGAAGCCCGAGGATCCAGTCTGAAGCTCCAGCACCAGGC
AAACTTCGGCGGACACGATCACGGCTTAGCCACGGCCTGTTTCGAGGCGT
CATCCTTCCGCAAGCGCTGAAGAGCGCTTTCCTCTTGGGCTTTGGTGTTG
TTTATGGAGTCATTACAATTCACCTGCATGAAAACCATTGGATTACCCCG
GTGAAGTTGGAGAATACACATTACTACGGATCATGGCAGTATCTTGCTTT
CTGGGGTGTGGCCGGCGCCGTTTTGGGCAATATTCTTCCTTGGTTCGACC
AGTTCTCAGATGAAATTATTGGCAGCCCTAAGCAGGCAAAAGGGTCAAGC
GACCCCGAGACTGCAGACCGTACTCTCTCATGGGTTTCAGTGGTTCGCAG
CGTTGGCGCGTTTGTGGGAATTGCATTTGCCATGGTAAGCAAAATTCTAG
CAACCAGCGTTCGTCGGTTCGATACTAATCTGGCTTTGTATCTTACAGCG
CCGACTTCCCTGGGAATCTACAACTCAAGCGTCACTTACCCTCGCGCTCG
TGAACCCCGTACTCTGGTACCTCATCGACCGCACACGGACCGGCTTCGTC
TTATCGACCGTTGTTGGATTGGCCGGCATGGGAATAATATTGGGACTCAA
GCCTGACTTAATTCCGTCTGCAGAGACTTCGGCTTTTGCAGCAAGCAAAT
TCGATGTCACCGGTTGGGGATATGGGCTGGCTGTTGAGATGTCACAGGAA
AGCATAGCAGTAAGGACTTGGGTTGCCAGCGTTCTTTTCTGCGCATGTGT
ATGCTTTGGAAACATTGGCCGGCAGCTTGCCATTGGAGTCCAGCGCGAGT
CGCTCAAGTGA
back to top

Coding sequence (CDS) from alignment at An04:542516..543626+

>CBS51388_003121-T1 ID=CBS51388_003121-T1|Name=CBS51388_003121-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2094bp|location=Sequence derived from alignment at An04:542516..543626+ (Aspergillus niger CBS 513.88)
ATGTCTGACGAGCCTACGATCCTTCGCCCGCGTCCGCGACGTGTGTTCGA
TCTCACGCCTGAAGAGCCCTCTACCCCAGTCGAACCCGCCAACCCAGACC
TGCTCGTCCCTAAAGATGCCGGCTCTACCAGCGTCAGCCGCAATGCTTCG
ATCATGAACTTGACCTCGTCGACGCTGTACGGTATTTACTCTCCTACTGC
ATTCGACAGTTCTCGTGACGACTCGAGTCCCTGGGGCACGGAAGCCCATA
CGCCTCAATCAGGAAGCCCGAGGATCCAGTCTGAAGCTCCAGCACCAGGC
AAACTTCGGCGGACACGATCACGGCTTAGCCACGGCCTGTTTCGAGGCGT
CATCCTTCCGCAAGCGCTGAAGAGCGCTTTCCTCTTGGGCTTTGGTGTTG
TTTATGGAGTCATTACAATTCACCTGCATGAAAACCATTGGATTACCCCG
GTGAAGTTGGAGAATACACATTACTACGGATCATGGCAGTATCTTGCTTT
CTGGGGTGTGGCCGGCGCCGTTTTGGGCAATATTCTTCCTTGGTTCGACC
AGTTCTCAGATGAAATTATTGGCAGCCCTAAGCAGGCAAAAGGGTCAAGC
GACCCCGAGACTGCAGACCGTACTCTCTCATGGGTTTCAGTGGTTCGCAG
CGTTGGCGCGTTTGTGGGAATTGCATTTGCCATGCGCCGACTTCCCTGGG
AATCTACAACTCAAGCGTCACTTACCCTCGCGCTCGTGAACCCCGTACTC
TGGTACCTCATCGACCGCACACGGACCGGCTTCGTCTTATCGACCGTTGT
TGGATTGGCCGGCATGGGAATAATATTGGGACTCAAGCCTGACTTAATTC
CGTCTGCAGAGACTTCGGCTTTTGCAGCAAGCAAATTCGATGTCACCGGT
TGGGGATATGGGCTGGCTGTTGAGATGTCACAGGAAAGCATAGCAGTAAG
GACTTGGGTTGCCAGCGTTCTTTTCTGCGCATGTGTATGCTTTGGAAACA
TTGGCCGGCAGCTTGCCATTGGAGTCCAGCGCGAGTCGCTCAAGTGAATG
TCTGACGAGCCTACGATCCTTCGCCCGCGTCCGCGACGTGTGTTCGATCT
CACGCCTGAAGAGCCCTCTACCCCAGTCGAACCCGCCAACCCAGACCTGC
TCGTCCCTAAAGATGCCGGCTCTACCAGCGTCAGCCGCAATGCTTCGATC
ATGAACTTGACCTCGTCGACGCTGTACGGTATTTACTCTCCTACTGCATT
CGACAGTTCTCGTGACGACTCGAGTCCCTGGGGCACGGAAGCCCATACGC
CTCAATCAGGAAGCCCGAGGATCCAGTCTGAAGCTCCAGCACCAGGCAAA
CTTCGGCGGACACGATCACGGCTTAGCCACGGCCTGTTTCGAGGCGTCAT
CCTTCCGCAAGCGCTGAAGAGCGCTTTCCTCTTGGGCTTTGGTGTTGTTT
ATGGAGTCATTACAATTCACCTGCATGAAAACCATTGGATTACCCCGGTG
AAGTTGGAGAATACACATTACTACGGATCATGGCAGTATCTTGCTTTCTG
GGGTGTGGCCGGCGCCGTTTTGGGCAATATTCTTCCTTGGTTCGACCAGT
TCTCAGATGAAATTATTGGCAGCCCTAAGCAGGCAAAAGGGTCAAGCGAC
CCCGAGACTGCAGACCGTACTCTCTCATGGGTTTCAGTGGTTCGCAGCGT
TGGCGCGTTTGTGGGAATTGCATTTGCCATGCGCCGACTTCCCTGGGAAT
CTACAACTCAAGCGTCACTTACCCTCGCGCTCGTGAACCCCGTACTCTGG
TACCTCATCGACCGCACACGGACCGGCTTCGTCTTATCGACCGTTGTTGG
ATTGGCCGGCATGGGAATAATATTGGGACTCAAGCCTGACTTAATTCCGT
CTGCAGAGACTTCGGCTTTTGCAGCAAGCAAATTCGATGTCACCGGTTGG
GGATATGGGCTGGCTGTTGAGATGTCACAGGAAAGCATAGCAGTAAGGAC
TTGGGTTGCCAGCGTTCTTTTCTGCGCATGTGTATGCTTTGGAAACATTG
GCCGGCAGCTTGCCATTGGAGTCCAGCGCGAGTCGCTCAAGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_003121CBS51388_003121Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003121-T1.exon1CBS51388_003121-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_003121-T1.exon2CBS51388_003121-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003121-T1.cdsCBS51388_003121-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003121-T1CBS51388_003121-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR025929
DBxrefPFAM:PF07281
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An04supercontigAn04:542516..543626 +
Powered by Drupal