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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:570816..572846- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003130-T1 ID=CBS51388_003130-T1|Name=CBS51388_003130-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2031bp|location=Sequence derived from alignment at An04:570816..572846- (Aspergillus niger CBS 513.88)
ATGATTGCATCTGCGCTCCAGGATTACCTCGGCCGATCTCCTCCTCCGAG
AGCAGGTACCCCTCCGAGGCGGACTGCTTCGCCTGCCCTCCTGAACCAGC
CTGTCAGGTCGAATTACGGTTCCTTTGATAATAAGGCTGGGAGAGAGGGT
TCAATATACTCAGCAGGTCCATACGAGGATCCCGAAGTTGTCAAGAGGCA
TTTGGTGCAACCCCAGAATGTGGTCGAGAATCGGGATATCCACTCGTCTG
GCGGCGCCCAAAGTAACGCCGAGGATGAGTTCTCTAGTCTGCAACTCCAG
GGTGGTGATATCACGAGACAGGTATACAGATGGGCTGAGGATGCAGAAGC
TGGAAGCTCTTTGCGGAAACCGAACCGGAGCAGGAGCTTCAGTCATGCTC
GACCTGCACCTGAGGATGAAACAACGAACATCAACAGTATCCGTGTCCCA
GGAGGTTTCAGAAGGGACTATCTAAGACGGGCAGTAGGCCCTAACCTTCC
TGGAGATCTGGATGGCTCGGGTGCGCAGGCTTCTGCTGCCCAGCCACAGC
TTCCAACAAGCAGCTTTTTGGAATTCCTGACTCTATACGGTCACTTTGCT
GGTGAAGAGCTCGAAGAGGATGACGAGGTCCTGGGCCCCGATGAGTATTT
CTCATCGGATACTTATGACGAAGCAGAAGGCAGAGAACCAGGTGAAGATT
CAGCCCTCCTCAGGCCAGACACAGCTGGCCGGAGGAAGCGCAAGCCACGC
GGTGGGACGGGAACCAACACGAGGACCGGAGCAGCATTACTTCTACTCAA
GTCTTTCGTTGGCACAGGAGTTTTGTTCTTGCCAAGAGCTTTCTTGAATG
GTGGCATGCTGTTCAGTAGTATGGTACTTCTTGGCGTATCACTACTCAGC
TTTTACTGCTTCATCCTTCTGGTTAATACGCGGCTGAAGATCGATGGTTC
CTTTGGTGACATTGGTGGTGCGCTCTATGGAAAGCATATGAGGCGCATCA
TCCTTGGATCCATTGTGTTGAGTCAATTGGGTTTCGTGTCGGCATATATT
GTTTTCACGGCCGAGAATTTACAAGCCTTCGTTCTGGCTGTCAGCAAATG
CAAATCTTTCATTGACATCAAGTTCATGGTGTTGCTGCAGCTGGTCATCT
TCCTCCCTCTCTCATTGATCCGCGATATCAGCAAGCTCGGGTTCACTGCT
CTCATTGCAGATCTGTTTATCATGCTGGGGCTGGTTTACCTCTTCTATTA
TGATTTCTTGACTATCTCGAACCAAGGAGGTGTTTCGGATATCATCTCCT
TCAACCCATCCACCTGGACACTTTTCATCGGCACGGCTATTTTCACGTAT
GAGGGAATTGGTTTGATCATCCCAATCCAGGAATCAATGAAGCACCCGCA
AAAGTTTCCCGGTGTTCTGGCAATGGTGATGGTCATAATCACGGTCATCT
TCCTCAGCGCTGGTGCATTTAGCTATGCGGCATATGGATCCGCAACGAAG
ACGGTAGTCATCCTCAACATGCCTCAGGATGACAAGTTTGTAAATGCCGT
GCAGTTCTTGTACTCTCTCGCGATTCTTCTCAGTACCCCACTGCAGCTTT
TCCCGGCCATTCGAATTTTGGAGAATGAGCTTTTCACTCGCAGCGGAAAG
TACAATCCCAGTATCAAGTGGAAGAAGAATTGCTTCCGTTTCTTCCTTGT
CATGATCTGTGCATTCATTGCCTGGGGCGGAGCAGAAGACTTGGACAAGT
TTGTTTCGCTTGTCGGAAGTTTCGCCTGTGTCCCCTTGATTTATGTATAT
CCGGTGAGTTAACCTGTTAAGTACCTTCAATTCGGTCCGCCAAAATGGTT
ACTAACTTGTGCTTAGCCTTTGCTGCATCTTAAGGCCTGTGCCCAATCGA
GACGACAGCAGATTGCCGATATCGCACTCTCCGTTTTCGGTGTCCTTAGC
TGTTTGTATACGACCGCCCTGACACTCAACAACTGGATCAATGGATCGGA
CGTCAAAGCTCCCGGGTACTGTGACTCATAG back to topCoding sequence (CDS) from alignment at An04:570816..572846- >CBS51388_003130-T1 ID=CBS51388_003130-T1|Name=CBS51388_003130-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3936bp|location=Sequence derived from alignment at An04:570816..572846- (Aspergillus niger CBS 513.88)
CCTTTGCTGCATCTTAAGGCCTGTGCCCAATCGAGACGACAGCAGATTGC
CGATATCGCACTCTCCGTTTTCGGTGTCCTTAGCTGTTTGTATACGACCG
CCCTGACACTCAACAACTGGATCAATGGATCGGACGTCAAAGCTCCCGGG
TACTGTGACTCATAGATGATTGCATCTGCGCTCCAGGATTACCTCGGCCG
ATCTCCTCCTCCGAGAGCAGGTACCCCTCCGAGGCGGACTGCTTCGCCTG
CCCTCCTGAACCAGCCTGTCAGGTCGAATTACGGTTCCTTTGATAATAAG
GCTGGGAGAGAGGGTTCAATATACTCAGCAGGTCCATACGAGGATCCCGA
AGTTGTCAAGAGGCATTTGGTGCAACCCCAGAATGTGGTCGAGAATCGGG
ATATCCACTCGTCTGGCGGCGCCCAAAGTAACGCCGAGGATGAGTTCTCT
AGTCTGCAACTCCAGGGTGGTGATATCACGAGACAGGTATACAGATGGGC
TGAGGATGCAGAAGCTGGAAGCTCTTTGCGGAAACCGAACCGGAGCAGGA
GCTTCAGTCATGCTCGACCTGCACCTGAGGATGAAACAACGAACATCAAC
AGTATCCGTGTCCCAGGAGGTTTCAGAAGGGACTATCTAAGACGGGCAGT
AGGCCCTAACCTTCCTGGAGATCTGGATGGCTCGGGTGCGCAGGCTTCTG
CTGCCCAGCCACAGCTTCCAACAAGCAGCTTTTTGGAATTCCTGACTCTA
TACGGTCACTTTGCTGGTGAAGAGCTCGAAGAGGATGACGAGGTCCTGGG
CCCCGATGAGTATTTCTCATCGGATACTTATGACGAAGCAGAAGGCAGAG
AACCAGGTGAAGATTCAGCCCTCCTCAGGCCAGACACAGCTGGCCGGAGG
AAGCGCAAGCCACGCGGTGGGACGGGAACCAACACGAGGACCGGAGCAGC
ATTACTTCTACTCAAGTCTTTCGTTGGCACAGGAGTTTTGTTCTTGCCAA
GAGCTTTCTTGAATGGTGGCATGCTGTTCAGTAGTATGGTACTTCTTGGC
GTATCACTACTCAGCTTTTACTGCTTCATCCTTCTGGTTAATACGCGGCT
GAAGATCGATGGTTCCTTTGGTGACATTGGTGGTGCGCTCTATGGAAAGC
ATATGAGGCGCATCATCCTTGGATCCATTGTGTTGAGTCAATTGGGTTTC
GTGTCGGCATATATTGTTTTCACGGCCGAGAATTTACAAGCCTTCGTTCT
GGCTGTCAGCAAATGCAAATCTTTCATTGACATCAAGTTCATGGTGTTGC
TGCAGCTGGTCATCTTCCTCCCTCTCTCATTGATCCGCGATATCAGCAAG
CTCGGGTTCACTGCTCTCATTGCAGATCTGTTTATCATGCTGGGGCTGGT
TTACCTCTTCTATTATGATTTCTTGACTATCTCGAACCAAGGAGGTGTTT
CGGATATCATCTCCTTCAACCCATCCACCTGGACACTTTTCATCGGCACG
GCTATTTTCACGTATGAGGGAATTGGTTTGATCATCCCAATCCAGGAATC
AATGAAGCACCCGCAAAAGTTTCCCGGTGTTCTGGCAATGGTGATGGTCA
TAATCACGGTCATCTTCCTCAGCGCTGGTGCATTTAGCTATGCGGCATAT
GGATCCGCAACGAAGACGGTAGTCATCCTCAACATGCCTCAGGATGACAA
GTTTGTAAATGCCGTGCAGTTCTTGTACTCTCTCGCGATTCTTCTCAGTA
CCCCACTGCAGCTTTTCCCGGCCATTCGAATTTTGGAGAATGAGCTTTTC
ACTCGCAGCGGAAAGTACAATCCCAGTATCAAGTGGAAGAAGAATTGCTT
CCGTTTCTTCCTTGTCATGATCTGTGCATTCATTGCCTGGGGCGGAGCAG
AAGACTTGGACAAGTTTGTTTCGCTTGTCGGAAGTTTCGCCTGTGTCCCC
TTGATTTATGTATATCCGCCTTTGCTGCATCTTAAGGCCTGTGCCCAATC
GAGACGACAGCAGATTGCCGATATCGCACTCTCCGTTTTCGGTGTCCTTA
GCTGTTTGTATACGACCGCCCTGACACTCAACAACTGGATCAATGGATCG
GACGTCAAAGCTCCCGGGTACTGTGACTCATAGATGATTGCATCTGCGCT
CCAGGATTACCTCGGCCGATCTCCTCCTCCGAGAGCAGGTACCCCTCCGA
GGCGGACTGCTTCGCCTGCCCTCCTGAACCAGCCTGTCAGGTCGAATTAC
GGTTCCTTTGATAATAAGGCTGGGAGAGAGGGTTCAATATACTCAGCAGG
TCCATACGAGGATCCCGAAGTTGTCAAGAGGCATTTGGTGCAACCCCAGA
ATGTGGTCGAGAATCGGGATATCCACTCGTCTGGCGGCGCCCAAAGTAAC
GCCGAGGATGAGTTCTCTAGTCTGCAACTCCAGGGTGGTGATATCACGAG
ACAGGTATACAGATGGGCTGAGGATGCAGAAGCTGGAAGCTCTTTGCGGA
AACCGAACCGGAGCAGGAGCTTCAGTCATGCTCGACCTGCACCTGAGGAT
GAAACAACGAACATCAACAGTATCCGTGTCCCAGGAGGTTTCAGAAGGGA
CTATCTAAGACGGGCAGTAGGCCCTAACCTTCCTGGAGATCTGGATGGCT
CGGGTGCGCAGGCTTCTGCTGCCCAGCCACAGCTTCCAACAAGCAGCTTT
TTGGAATTCCTGACTCTATACGGTCACTTTGCTGGTGAAGAGCTCGAAGA
GGATGACGAGGTCCTGGGCCCCGATGAGTATTTCTCATCGGATACTTATG
ACGAAGCAGAAGGCAGAGAACCAGGTGAAGATTCAGCCCTCCTCAGGCCA
GACACAGCTGGCCGGAGGAAGCGCAAGCCACGCGGTGGGACGGGAACCAA
CACGAGGACCGGAGCAGCATTACTTCTACTCAAGTCTTTCGTTGGCACAG
GAGTTTTGTTCTTGCCAAGAGCTTTCTTGAATGGTGGCATGCTGTTCAGT
AGTATGGTACTTCTTGGCGTATCACTACTCAGCTTTTACTGCTTCATCCT
TCTGGTTAATACGCGGCTGAAGATCGATGGTTCCTTTGGTGACATTGGTG
GTGCGCTCTATGGAAAGCATATGAGGCGCATCATCCTTGGATCCATTGTG
TTGAGTCAATTGGGTTTCGTGTCGGCATATATTGTTTTCACGGCCGAGAA
TTTACAAGCCTTCGTTCTGGCTGTCAGCAAATGCAAATCTTTCATTGACA
TCAAGTTCATGGTGTTGCTGCAGCTGGTCATCTTCCTCCCTCTCTCATTG
ATCCGCGATATCAGCAAGCTCGGGTTCACTGCTCTCATTGCAGATCTGTT
TATCATGCTGGGGCTGGTTTACCTCTTCTATTATGATTTCTTGACTATCT
CGAACCAAGGAGGTGTTTCGGATATCATCTCCTTCAACCCATCCACCTGG
ACACTTTTCATCGGCACGGCTATTTTCACGTATGAGGGAATTGGTTTGAT
CATCCCAATCCAGGAATCAATGAAGCACCCGCAAAAGTTTCCCGGTGTTC
TGGCAATGGTGATGGTCATAATCACGGTCATCTTCCTCAGCGCTGGTGCA
TTTAGCTATGCGGCATATGGATCCGCAACGAAGACGGTAGTCATCCTCAA
CATGCCTCAGGATGACAAGTTTGTAAATGCCGTGCAGTTCTTGTACTCTC
TCGCGATTCTTCTCAGTACCCCACTGCAGCTTTTCCCGGCCATTCGAATT
TTGGAGAATGAGCTTTTCACTCGCAGCGGAAAGTACAATCCCAGTATCAA
GTGGAAGAAGAATTGCTTCCGTTTCTTCCTTGTCATGATCTGTGCATTCA
TTGCCTGGGGCGGAGCAGAAGACTTGGACAAGTTTGTTTCGCTTGTCGGA
AGTTTCGCCTGTGTCCCCTTGATTTATGTATATCCG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013057 |
| DBxref | PFAM:PF01490 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:570816..572846 - |
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