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CBS51388_003132-T1, CBS51388_003132-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_003132-T1
Unique NameCBS51388_003132-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An04:578222..579357-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_003132-T1 ID=CBS51388_003132-T1|Name=CBS51388_003132-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1136bp|location=Sequence derived from alignment at An04:578222..579357- (Aspergillus niger CBS 513.88)
ATGTCTAAACTCTTCAACGCTGTTACTCTGCTCGGTGCAGGCACTCAAGG
CTCGCGCCTTGCATACATGGTATGTTTGATTCTCTGACTCTAAATCGGAG
CTCTGGTTTAACTAGTATCGGAAACAGTGGTCGCGCCAAGGGAGACCAGT
CTACCTTGTCGACCAAAGCCCGGCCCAGCTAAACCTGGCATTAGCCACCA
TACAAAGGCTGAGAGCCTCCAATCCAGCTGGCAAGGAAGGCAAAATAACC
AGCCTCACTGTCGACGATCTGGACCCAGCGCTTCGCGACTCCTGGCTTGC
TATTGAGGTAGGGAAAGGCCACCGAGCACTGATGTACCCTAGCTAAATCC
CGTCAGTGTGTCCCAGAGGACCTGGAATACAAGCGGTCCGTGATGCTGGA
GCTCGACAGTAGATCGCACTCCCAGACAATCATCGCATCAAACTCGAGCA
GTTATTCCATTACTGATATCTGCAATGGACTGTCGCTTAAGGCAGATGAT
CGTTTCGTCAACCTGCATTCCTGTAAGTCCAATACCTATCAATAACTTGC
CCCACGAGCAGCTATACTAACTATTATCTTTCCAAGTCTGGCCACCCGAG
ACAACAGGTAACGAAGTCCAAGCCTACTCCAACCATGAAGAGCTTTTTCA
ATGTGCTAATCAACCATCCCTCAGCAATCGAAATTATGGGCTCCAGCCAA
ACCCGACCCGACATCATACCTCTGCTTATGAAGGAAACCCAAGACCATGG
ATTCCAACCCTTCCACGTCCGCAAATCCTCCACAGGCTACACCTTCAACC
GGTATCTCGCCAACCACGTCATATGGAACACGAGTATACATGCTAATCAT
GTATAGCATCTGGGCCGCCATCAAACGAGAGACCCTCCTGGTCTTAGAAG
AGGGCATTGCCACGCCCGAGGAGGTGGACCAAATCTACAAGTGTGTGCTG
AAAACACCCCGAGGGCCCTGCGAGCTGATGGACATTGCTGGATTGGACGT
GATTCTCGCCGTCGAGGAACATTATGCCAAGGTGAGAATGGGGATCCCCA
ATGCGCCGCGCAAGTACCTACGGGAGATGATCGATCGGGGTGACTTGGGT
GTCAAATCCGGAAATGGCTTCTTCAGTTATACTTAG
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Coding sequence (CDS) from alignment at An04:578222..579357-

>CBS51388_003132-T1 ID=CBS51388_003132-T1|Name=CBS51388_003132-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3915bp|location=Sequence derived from alignment at An04:578222..579357- (Aspergillus niger CBS 513.88)
CATCTGGGCCGCCATCAAACGAGAGACCCTCCTGGTCTTAGAAGAGGGCA
TTGCCACGCCCGAGGAGGTGGACCAAATCTACAAGTGTGTGCTGAAAACA
CCCCGAGGGCCCTGCGAGCTGATGGACATTGCTGGATTGGACGTGATTCT
CGCCGTCGAGGAACATTATGCCAAGGTGAGAATGGGGATCCCCAATGCGC
CGCGCAAGTACCTACGGGAGATGATCGATCGGGGTGACTTGGGTGTCAAA
TCCGGAAATGGCTTCTTCAGTTATACTTAGTCTGGCCACCCGAGACAACA
GGTAACGAAGTCCAAGCCTACTCCAACCATGAAGAGCTTTTTCAATGTGC
TAATCAACCATCCCTCAGCAATCGAAATTATGGGCTCCAGCCAAACCCGA
CCCGACATCATACCTCTGCTTATGAAGGAAACCCAAGACCATGGATTCCA
ACCCTTCCACGTCCGCAAATCCTCCACAGGCTACACCTTCAACCGATGAT
CGTTTCGTCAACCTGCATTCCTTATCGGAAACAGTGGTCGCGCCAAGGGA
GACCAGTCTACCTTGTCGACCAAAGCCCGGCCCAGCTAAACCTGGCATTA
GCCACCATACAAAGGCTGAGAGCCTCCAATCCAGCTGGCAAGGAAGGCAA
AATAACCAGCCTCACTGTCGACGATCTGGACCCAGCGCTTCGCGACTCCT
GGCTTGCTATTGAGATGTCTAAACTCTTCAACGCTGTTACTCTGCTCGGT
GCAGGCACTCAAGGCTCGCGCCTTGCATACATGCATCTGGGCCGCCATCA
AACGAGAGACCCTCCTGGTCTTAGAAGAGGGCATTGCCACGCCCGAGGAG
GTGGACCAAATCTACAAGTGTGTGCTGAAAACACCCCGAGGGCCCTGCGA
GCTGATGGACATTGCTGGATTGGACGTGATTCTCGCCGTCGAGGAACATT
ATGCCAAGGTGAGAATGGGGATCCCCAATGCGCCGCGCAAGTACCTACGG
GAGATGATCGATCGGGGTGACTTGGGTGTCAAATCCGGAAATGGCTTCTT
CAGTTATACTTAGTCTGGCCACCCGAGACAACAGGTAACGAAGTCCAAGC
CTACTCCAACCATGAAGAGCTTTTTCAATGTGCTAATCAACCATCCCTCA
GCAATCGAAATTATGGGCTCCAGCCAAACCCGACCCGACATCATACCTCT
GCTTATGAAGGAAACCCAAGACCATGGATTCCAACCCTTCCACGTCCGCA
AATCCTCCACAGGCTACACCTTCAACCGATGATCGTTTCGTCAACCTGCA
TTCCTTATCGGAAACAGTGGTCGCGCCAAGGGAGACCAGTCTACCTTGTC
GACCAAAGCCCGGCCCAGCTAAACCTGGCATTAGCCACCATACAAAGGCT
GAGAGCCTCCAATCCAGCTGGCAAGGAAGGCAAAATAACCAGCCTCACTG
TCGACGATCTGGACCCAGCGCTTCGCGACTCCTGGCTTGCTATTGAGATG
TCTAAACTCTTCAACGCTGTTACTCTGCTCGGTGCAGGCACTCAAGGCTC
GCGCCTTGCATACATGCATCTGGGCCGCCATCAAACGAGAGACCCTCCTG
GTCTTAGAAGAGGGCATTGCCACGCCCGAGGAGGTGGACCAAATCTACAA
GTGTGTGCTGAAAACACCCCGAGGGCCCTGCGAGCTGATGGACATTGCTG
GATTGGACGTGATTCTCGCCGTCGAGGAACATTATGCCAAGGTGAGAATG
GGGATCCCCAATGCGCCGCGCAAGTACCTACGGGAGATGATCGATCGGGG
TGACTTGGGTGTCAAATCCGGAAATGGCTTCTTCAGTTATACTTAGTCTG
GCCACCCGAGACAACAGGTAACGAAGTCCAAGCCTACTCCAACCATGAAG
AGCTTTTTCAATGTGCTAATCAACCATCCCTCAGCAATCGAAATTATGGG
CTCCAGCCAAACCCGACCCGACATCATACCTCTGCTTATGAAGGAAACCC
AAGACCATGGATTCCAACCCTTCCACGTCCGCAAATCCTCCACAGGCTAC
ACCTTCAACCGATGATCGTTTCGTCAACCTGCATTCCTTATCGGAAACAG
TGGTCGCGCCAAGGGAGACCAGTCTACCTTGTCGACCAAAGCCCGGCCCA
GCTAAACCTGGCATTAGCCACCATACAAAGGCTGAGAGCCTCCAATCCAG
CTGGCAAGGAAGGCAAAATAACCAGCCTCACTGTCGACGATCTGGACCCA
GCGCTTCGCGACTCCTGGCTTGCTATTGAGATGTCTAAACTCTTCAACGC
TGTTACTCTGCTCGGTGCAGGCACTCAAGGCTCGCGCCTTGCATACATGC
ATCTGGGCCGCCATCAAACGAGAGACCCTCCTGGTCTTAGAAGAGGGCAT
TGCCACGCCCGAGGAGGTGGACCAAATCTACAAGTGTGTGCTGAAAACAC
CCCGAGGGCCCTGCGAGCTGATGGACATTGCTGGATTGGACGTGATTCTC
GCCGTCGAGGAACATTATGCCAAGGTGAGAATGGGGATCCCCAATGCGCC
GCGCAAGTACCTACGGGAGATGATCGATCGGGGTGACTTGGGTGTCAAAT
CCGGAAATGGCTTCTTCAGTTATACTTAGTCTGGCCACCCGAGACAACAG
GTAACGAAGTCCAAGCCTACTCCAACCATGAAGAGCTTTTTCAATGTGCT
AATCAACCATCCCTCAGCAATCGAAATTATGGGCTCCAGCCAAACCCGAC
CCGACATCATACCTCTGCTTATGAAGGAAACCCAAGACCATGGATTCCAA
CCCTTCCACGTCCGCAAATCCTCCACAGGCTACACCTTCAACCGATGATC
GTTTCGTCAACCTGCATTCCTTATCGGAAACAGTGGTCGCGCCAAGGGAG
ACCAGTCTACCTTGTCGACCAAAGCCCGGCCCAGCTAAACCTGGCATTAG
CCACCATACAAAGGCTGAGAGCCTCCAATCCAGCTGGCAAGGAAGGCAAA
ATAACCAGCCTCACTGTCGACGATCTGGACCCAGCGCTTCGCGACTCCTG
GCTTGCTATTGAGATGTCTAAACTCTTCAACGCTGTTACTCTGCTCGGTG
CAGGCACTCAAGGCTCGCGCCTTGCATACATGCATCTGGGCCGCCATCAA
ACGAGAGACCCTCCTGGTCTTAGAAGAGGGCATTGCCACGCCCGAGGAGG
TGGACCAAATCTACAAGTGTGTGCTGAAAACACCCCGAGGGCCCTGCGAG
CTGATGGACATTGCTGGATTGGACGTGATTCTCGCCGTCGAGGAACATTA
TGCCAAGGTGAGAATGGGGATCCCCAATGCGCCGCGCAAGTACCTACGGG
AGATGATCGATCGGGGTGACTTGGGTGTCAAATCCGGAAATGGCTTCTTC
AGTTATACTTAGTCTGGCCACCCGAGACAACAGGTAACGAAGTCCAAGCC
TACTCCAACCATGAAGAGCTTTTTCAATGTGCTAATCAACCATCCCTCAG
CAATCGAAATTATGGGCTCCAGCCAAACCCGACCCGACATCATACCTCTG
CTTATGAAGGAAACCCAAGACCATGGATTCCAACCCTTCCACGTCCGCAA
ATCCTCCACAGGCTACACCTTCAACCGATGATCGTTTCGTCAACCTGCAT
TCCTTATCGGAAACAGTGGTCGCGCCAAGGGAGACCAGTCTACCTTGTCG
ACCAAAGCCCGGCCCAGCTAAACCTGGCATTAGCCACCATACAAAGGCTG
AGAGCCTCCAATCCAGCTGGCAAGGAAGGCAAAATAACCAGCCTCACTGT
CGACGATCTGGACCCAGCGCTTCGCGACTCCTGGCTTGCTATTGAGATGT
CTAAACTCTTCAACGCTGTTACTCTGCTCGGTGCAGGCACTCAAGGCTCG
CGCCTTGCATACATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:00038573-hydroxyacyl-CoA dehydrogenase activity
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0006631fatty acid metabolic process
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_003132CBS51388_003132Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003132-T1CBS51388_003132-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003132-T1.cdsCBS51388_003132-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003132-T1.exon5CBS51388_003132-T1.exon5Aspergillus niger CBS 513.88exon
CBS51388_003132-T1.exon4CBS51388_003132-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_003132-T1.exon3CBS51388_003132-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_003132-T1.exon2CBS51388_003132-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_003132-T1.exon1CBS51388_003132-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008927
DBxrefInterPro:IPR013328
DBxrefInterPro:IPR006108
DBxrefPFAM:PF00725
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An04supercontigAn04:578222..579357 -
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