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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:584464..586622- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003134-T1 ID=CBS51388_003134-T1|Name=CBS51388_003134-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2159bp|location=Sequence derived from alignment at An04:584464..586622- (Aspergillus niger CBS 513.88)
ATGGATGTGCTCGGTGCAAGAGCAAACGAGTGAGTTTAGTATCCTTTGCG
CGGTGGCTACATAGTCCCGCCCCATGTGGCCCCAAACATTAATTTTGATG
CTTCGCCTATTAATAGGTAAAATGCGGGGAAGAACGACCTCATTGTAGTC
GATGCACCCGCCTGGGTGTCAATTGCCCTGGATATGTCCAGTCTCTGCGT
TGGGTCACCAAGTATCCGCCGCAGGCCCACGGGGAGCCGAACAAAGATCC
CGCTGGGGATATTCCCAGTGATTCTAACACTATCCCGAATCAAAGTTCCG
ATCCCAAAAATCTGACTACCAGCGCTGCCGACTATGTTGACCCGCTGACT
CAGTCTTTGGCCACGGATGGTGACAGCCTCAACTTTACCACTTCCGACGG
CCCGGCCAATCCTCGAGGTCTTGAACTAGGCGGACCAGGCGGTATATGTG
ACAACTTATGGGACTTACAGCAGTCAGGCTCACTACCGGAACTGGCAGAC
CTCCATTCTCCAGCATCGGCATCAACAGCTAGCCAAAATAACCCAGCATT
GAACTTCGAATCACCGGGAACTAATGCAGATGATCCGTTCGGGTTGTTCT
CTTTGGCCGCACCGATTCTACAAGATGAGCCTCACATCTTTCCTGGCTTT
TCACCTTCTACTATTGTACGCCACTACCCTCCACCTGGCTCAAGGCCAGC
ACAGCGGGACTTCACATCGATCCCGCAGCCCCTCAACAATCCTTCGTGGA
CACTCGTGGAGTACTACTTCAAAGAGGTAGCGGCCTTGTTTTCAAGCTAT
GACAGTCAGATGAACCCATTCCGGTCGACAGTATCCCGACTATGGGGCTC
GTCGTTGGCCATGTGTCGGACCATGCAGAGCATGGCTGCTGCAACACTCG
TCCACGACTTCCCTCAATTCGGCCCGTTAGGCCGGAAAATGCGTGACGAG
GCAGTCGATATCATCACAAAGGAGTCTGCCCTGGACGACAAGTCACTCCT
AGCTCTCTTGATGCTTGGTCAAACAGCCAGCTGGCACGACCCCAAGGACC
TTGGCATTTCCTTCTTCAACCTGCTGCGAAATCATCTGGACACCAAGCAC
GCCGGACCACCAATTCCAGGCCGTAGCAATAACCATCAATTTTTTGAAGA
AGCTTTGGTCTACTGGGAAATGCTCCTATCCTTTGTGGCGGATGACTCGG
CGGTGTTGCCAGGCTCCGCAGCCGCCGCAACAGGTGAATCGCTCGTCCTA
CAACGCGTTCCCCATCCATGGACCGGCATAGCCCGCGACACCCAGCATAC
CGTCCAAGAAGTAGGAAGGCTTATACGTAGGGAGCGCAAACGAATTCGCT
CCCGCTGCTTTACCTCACACTCAGACATTGCACGCGCCCAGCGCGCCATG
GCAAAAGCAACAGAGCTAGAAGAGCGACTTTTGAGTCTGGCGCACCCAGC
TGAAGCTGAAATCATCAGCCCAGGCGACGACGAAACCCCAGTCTGGCATC
TTCTCACAATGGCCGAAGTATACCGCTGTACCGGTCTAATGCAATTATAC
CGGGTCTTTCCCGATCTTCTTCGCCGACGACTACCCACACAACGACCTTC
CCCAAACCCGCAAGCTCCAGAACCAACCATGCAAGATCCGTTCCTCTCCT
CTCCAGTGGGCAGTAGTACACCCTGGTACTGCGACCCTTCATGTCCGCCC
GCAAAACCCACCGACTCCGCCGATCCAACAACAACATCAACCACCGCACA
TTCAGGCTCCGACTCCGACTCTTACTACGACGCCTGGCTGACCGAATTTA
CCCTCACAACTCTCTCCCGCCTAAAGACCATCCCCCTTGAGTCCCGCACC
CGATGTCTCCAGCCCTTCCTCCTCGTAGCCTCGAGTAGCGAGCTTCGTCT
GCCCCGTCTGCCCCCACTTGACGCCACTCTCGATAGCAGCAACGGCCCAA
GTATCTCCTCCCATGCCATTGACGTCTCGCAAAGTCGTCGGTTCATCCTT
GGCCGCCTCACCTCGTATCTTCACGTGCTCCCTCCCAAGCCCATTAGTGT
CTGTCTGCAGCTGGTGCGGGAGGTTTGGCGGCGTATGGACGCCGGGGAGC
CGGGCGTCTATTGGATGGATGTGATGATAGAAAAGGGCTGGGAGACTACA
ATGGGGTAA back to topCoding sequence (CDS) from alignment at An04:584464..586622- >CBS51388_003134-T1 ID=CBS51388_003134-T1|Name=CBS51388_003134-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4080bp|location=Sequence derived from alignment at An04:584464..586622- (Aspergillus niger CBS 513.88)
TCGATGCACCCGCCTGGGTGTCAATTGCCCTGGATATGTCCAGTCTCTGC
GTTGGGTCACCAAGTATCCGCCGCAGGCCCACGGGGAGCCGAACAAAGAT
CCCGCTGGGGATATTCCCAGTGATTCTAACACTATCCCGAATCAAAGTTC
CGATCCCAAAAATCTGACTACCAGCGCTGCCGACTATGTTGACCCGCTGA
CTCAGTCTTTGGCCACGGATGGTGACAGCCTCAACTTTACCACTTCCGAC
GGCCCGGCCAATCCTCGAGGTCTTGAACTAGGCGGACCAGGCGGTATATG
TGACAACTTATGGGACTTACAGCAGTCAGGCTCACTACCGGAACTGGCAG
ACCTCCATTCTCCAGCATCGGCATCAACAGCTAGCCAAAATAACCCAGCA
TTGAACTTCGAATCACCGGGAACTAATGCAGATGATCCGTTCGGGTTGTT
CTCTTTGGCCGCACCGATTCTACAAGATGAGCCTCACATCTTTCCTGGCT
TTTCACCTTCTACTATTGTACGCCACTACCCTCCACCTGGCTCAAGGCCA
GCACAGCGGGACTTCACATCGATCCCGCAGCCCCTCAACAATCCTTCGTG
GACACTCGTGGAGTACTACTTCAAAGAGGTAGCGGCCTTGTTTTCAAGCT
ATGACAGTCAGATGAACCCATTCCGGTCGACAGTATCCCGACTATGGGGC
TCGTCGTTGGCCATGTGTCGGACCATGCAGAGCATGGCTGCTGCAACACT
CGTCCACGACTTCCCTCAATTCGGCCCGTTAGGCCGGAAAATGCGTGACG
AGGCAGTCGATATCATCACAAAGGAGTCTGCCCTGGACGACAAGTCACTC
CTAGCTCTCTTGATGCTTGGTCAAACAGCCAGCTGGCACGACCCCAAGGA
CCTTGGCATTTCCTTCTTCAACCTGCTGCGAAATCATCTGGACACCAAGC
ACGCCGGACCACCAATTCCAGGCCGTAGCAATAACCATCAATTTTTTGAA
GAAGCTTTGGTCTACTGGGAAATGCTCCTATCCTTTGTGGCGGATGACTC
GGCGGTGTTGCCAGGCTCCGCAGCCGCCGCAACAGGTGAATCGCTCGTCC
TACAACGCGTTCCCCATCCATGGACCGGCATAGCCCGCGACACCCAGCAT
ACCGTCCAAGAAGTAGGAAGGCTTATACGTAGGGAGCGCAAACGAATTCG
CTCCCGCTGCTTTACCTCACACTCAGACATTGCACGCGCCCAGCGCGCCA
TGGCAAAAGCAACAGAGCTAGAAGAGCGACTTTTGAGTCTGGCGCACCCA
GCTGAAGCTGAAATCATCAGCCCAGGCGACGACGAAACCCCAGTCTGGCA
TCTTCTCACAATGGCCGAAGTATACCGCTGTACCGGTCTAATGCAATTAT
ACCGGGTCTTTCCCGATCTTCTTCGCCGACGACTACCCACACAACGACCT
TCCCCAAACCCGCAAGCTCCAGAACCAACCATGCAAGATCCGTTCCTCTC
CTCTCCAGTGGGCAGTAGTACACCCTGGTACTGCGACCCTTCATGTCCGC
CCGCAAAACCCACCGACTCCGCCGATCCAACAACAACATCAACCACCGCA
CATTCAGGCTCCGACTCCGACTCTTACTACGACGCCTGGCTGACCGAATT
TACCCTCACAACTCTCTCCCGCCTAAAGACCATCCCCCTTGAGTCCCGCA
CCCGATGTCTCCAGCCCTTCCTCCTCGTAGCCTCGAGTAGCGAGCTTCGT
CTGCCCCGTCTGCCCCCACTTGACGCCACTCTCGATAGCAGCAACGGCCC
AAGTATCTCCTCCCATGCCATTGACGTCTCGCAAAGTCGTCGGTTCATCC
TTGGCCGCCTCACCTCGTATCTTCACGTGCTCCCTCCCAAGCCCATTAGT
GTCTGTCTGCAGCTGGTGCGGGAGGTTTGGCGGCGTATGGACGCCGGGGA
GCCGGGCGTCTATTGGATGGATGTGATGATAGAAAAGGGCTGGGAGACTA
CAATGGGGTAAATGGATGTGCTCGGTGCAAGAGCAAACGATCGATGCACC
CGCCTGGGTGTCAATTGCCCTGGATATGTCCAGTCTCTGCGTTGGGTCAC
CAAGTATCCGCCGCAGGCCCACGGGGAGCCGAACAAAGATCCCGCTGGGG
ATATTCCCAGTGATTCTAACACTATCCCGAATCAAAGTTCCGATCCCAAA
AATCTGACTACCAGCGCTGCCGACTATGTTGACCCGCTGACTCAGTCTTT
GGCCACGGATGGTGACAGCCTCAACTTTACCACTTCCGACGGCCCGGCCA
ATCCTCGAGGTCTTGAACTAGGCGGACCAGGCGGTATATGTGACAACTTA
TGGGACTTACAGCAGTCAGGCTCACTACCGGAACTGGCAGACCTCCATTC
TCCAGCATCGGCATCAACAGCTAGCCAAAATAACCCAGCATTGAACTTCG
AATCACCGGGAACTAATGCAGATGATCCGTTCGGGTTGTTCTCTTTGGCC
GCACCGATTCTACAAGATGAGCCTCACATCTTTCCTGGCTTTTCACCTTC
TACTATTGTACGCCACTACCCTCCACCTGGCTCAAGGCCAGCACAGCGGG
ACTTCACATCGATCCCGCAGCCCCTCAACAATCCTTCGTGGACACTCGTG
GAGTACTACTTCAAAGAGGTAGCGGCCTTGTTTTCAAGCTATGACAGTCA
GATGAACCCATTCCGGTCGACAGTATCCCGACTATGGGGCTCGTCGTTGG
CCATGTGTCGGACCATGCAGAGCATGGCTGCTGCAACACTCGTCCACGAC
TTCCCTCAATTCGGCCCGTTAGGCCGGAAAATGCGTGACGAGGCAGTCGA
TATCATCACAAAGGAGTCTGCCCTGGACGACAAGTCACTCCTAGCTCTCT
TGATGCTTGGTCAAACAGCCAGCTGGCACGACCCCAAGGACCTTGGCATT
TCCTTCTTCAACCTGCTGCGAAATCATCTGGACACCAAGCACGCCGGACC
ACCAATTCCAGGCCGTAGCAATAACCATCAATTTTTTGAAGAAGCTTTGG
TCTACTGGGAAATGCTCCTATCCTTTGTGGCGGATGACTCGGCGGTGTTG
CCAGGCTCCGCAGCCGCCGCAACAGGTGAATCGCTCGTCCTACAACGCGT
TCCCCATCCATGGACCGGCATAGCCCGCGACACCCAGCATACCGTCCAAG
AAGTAGGAAGGCTTATACGTAGGGAGCGCAAACGAATTCGCTCCCGCTGC
TTTACCTCACACTCAGACATTGCACGCGCCCAGCGCGCCATGGCAAAAGC
AACAGAGCTAGAAGAGCGACTTTTGAGTCTGGCGCACCCAGCTGAAGCTG
AAATCATCAGCCCAGGCGACGACGAAACCCCAGTCTGGCATCTTCTCACA
ATGGCCGAAGTATACCGCTGTACCGGTCTAATGCAATTATACCGGGTCTT
TCCCGATCTTCTTCGCCGACGACTACCCACACAACGACCTTCCCCAAACC
CGCAAGCTCCAGAACCAACCATGCAAGATCCGTTCCTCTCCTCTCCAGTG
GGCAGTAGTACACCCTGGTACTGCGACCCTTCATGTCCGCCCGCAAAACC
CACCGACTCCGCCGATCCAACAACAACATCAACCACCGCACATTCAGGCT
CCGACTCCGACTCTTACTACGACGCCTGGCTGACCGAATTTACCCTCACA
ACTCTCTCCCGCCTAAAGACCATCCCCCTTGAGTCCCGCACCCGATGTCT
CCAGCCCTTCCTCCTCGTAGCCTCGAGTAGCGAGCTTCGTCTGCCCCGTC
TGCCCCCACTTGACGCCACTCTCGATAGCAGCAACGGCCCAAGTATCTCC
TCCCATGCCATTGACGTCTCGCAAAGTCGTCGGTTCATCCTTGGCCGCCT
CACCTCGTATCTTCACGTGCTCCCTCCCAAGCCCATTAGTGTCTGTCTGC
AGCTGGTGCGGGAGGTTTGGCGGCGTATGGACGCCGGGGAGCCGGGCGTC
TATTGGATGGATGTGATGATAGAAAAGGGCTGGGAGACTACAATGGGGTA
AATGGATGTGCTCGGTGCAAGAGCAAACGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021858 |
| DBxref | PFAM:PF11951 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:584464..586622 - |
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