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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:637824..638770- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003156-T1 ID=CBS51388_003156-T1|Name=CBS51388_003156-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=947bp|location=Sequence derived from alignment at An04:637824..638770- (Aspergillus niger CBS 513.88)
ATGGCCTCCAGAGCCGCAGCAGGCGCCCGTCCCGGGGCCAGGTTCGCTCA
GTTCAAGCTTGTATTGCTGGGTTGGTATCCCCCTGTTATTGGCCCCACTA
TAGTGTGCGACAAAAGTACTGACATGTTGTTTTCGTTCGCCCTTTCTAGG
AGAGTCCGCGGTCGGAAAGGTTGGGATTTTGTGATCTTCAGGGTTCTAAA
TAGCGGTCGCTGACTTTCTGGCTCCACAGAGTTCGCTAGTACTGAGATTC
GTCAAGGTGGGATAATTCGTCGATATTTCCGGAAATTTTTCTTACGAAAG
GACGGTTTTTTTTGGTTGACTTACTGGGACTAACACTGCATAAGGATCAA
TTTGATGATTACCGCGAGTCGACCATTGGCGCCGCCTTCCTCACACAAAC
CATCTCCCTGGACGAAAGCACGACGGTTAAGTTCGAGATATGGGATACAG
CCGGCCAGGAGAGATACAAGTCTCTGGCCCCCATGTATTACAGAAACGCC
AACTGCGCGGTCGTTGTGTACGATATCACTCAGGCTGTATGATTCCCGGC
TCGACCTATTCCTTTCCTACAGTAACTAATTGGTCGTAACGTTGAGCAGT
CATCACTGGACAAGGCCAAGTCGTGGGTGAAGGAATTGCAGCGTCAGGCA
AATGAGAACATCGTCATCGCCCTTGCAGGAAACAAGCTCGATCTGGTGAC
GGAGAGCCCGGACAAGAGAGCCATTCCTACGGCTGACGCCGAAGCCTATG
CACGTGAAGCTGGTCTTCTGTTCTTTGAGACATCTGCAAAGACCTCCTCC
AACGTTAAGGAACTATTCACAGCAATCGCGAAGAAACTCCCTCTTGATCA
GGCGGGTCCTCGAAACCTGCGCACAACTCCCCGTCCTGGTGTTGACCTGC
GGCCAGAAGCACCCGGTACCCAAGGTGCCGGTTCCTGCAACTGCTAG back to topCoding sequence (CDS) from alignment at An04:637824..638770- >CBS51388_003156-T1 ID=CBS51388_003156-T1|Name=CBS51388_003156-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3285bp|location=Sequence derived from alignment at An04:637824..638770- (Aspergillus niger CBS 513.88)
TCATCACTGGACAAGGCCAAGTCGTGGGTGAAGGAATTGCAGCGTCAGGC
AAATGAGAACATCGTCATCGCCCTTGCAGGAAACAAGCTCGATCTGGTGA
CGGAGAGCCCGGACAAGAGAGCCATTCCTACGGCTGACGCCGAAGCCTAT
GCACGTGAAGCTGGTCTTCTGTTCTTTGAGACATCTGCAAAGACCTCCTC
CAACGTTAAGGAACTATTCACAGCAATCGCGAAGAAACTCCCTCTTGATC
AGGCGGGTCCTCGAAACCTGCGCACAACTCCCCGTCCTGGTGTTGACCTG
CGGCCAGAAGCACCCGGTACCCAAGGTGCCGGTTCCTGCAACTGCTAGGA
TCAATTTGATGATTACCGCGAGTCGACCATTGGCGCCGCCTTCCTCACAC
AAACCATCTCCCTGGACGAAAGCACGACGGTTAAGTTCGAGATATGGGAT
ACAGCCGGCCAGGAGAGATACAAGTCTCTGGCCCCCATGTATTACAGAAA
CGCCAACTGCGCGGTCGTTGTGTACGATATCACTCAGGCTAGTTCGCTAG
TACTGAGATTCGTCAAGGAGAGTCCGCGGTCGGAAAGATGGCCTCCAGAG
CCGCAGCAGGCGCCCGTCCCGGGGCCAGGTTCGCTCAGTTCAAGCTTGTA
TTGCTGGTCATCACTGGACAAGGCCAAGTCGTGGGTGAAGGAATTGCAGC
GTCAGGCAAATGAGAACATCGTCATCGCCCTTGCAGGAAACAAGCTCGAT
CTGGTGACGGAGAGCCCGGACAAGAGAGCCATTCCTACGGCTGACGCCGA
AGCCTATGCACGTGAAGCTGGTCTTCTGTTCTTTGAGACATCTGCAAAGA
CCTCCTCCAACGTTAAGGAACTATTCACAGCAATCGCGAAGAAACTCCCT
CTTGATCAGGCGGGTCCTCGAAACCTGCGCACAACTCCCCGTCCTGGTGT
TGACCTGCGGCCAGAAGCACCCGGTACCCAAGGTGCCGGTTCCTGCAACT
GCTAGGATCAATTTGATGATTACCGCGAGTCGACCATTGGCGCCGCCTTC
CTCACACAAACCATCTCCCTGGACGAAAGCACGACGGTTAAGTTCGAGAT
ATGGGATACAGCCGGCCAGGAGAGATACAAGTCTCTGGCCCCCATGTATT
ACAGAAACGCCAACTGCGCGGTCGTTGTGTACGATATCACTCAGGCTAGT
TCGCTAGTACTGAGATTCGTCAAGGAGAGTCCGCGGTCGGAAAGATGGCC
TCCAGAGCCGCAGCAGGCGCCCGTCCCGGGGCCAGGTTCGCTCAGTTCAA
GCTTGTATTGCTGGTCATCACTGGACAAGGCCAAGTCGTGGGTGAAGGAA
TTGCAGCGTCAGGCAAATGAGAACATCGTCATCGCCCTTGCAGGAAACAA
GCTCGATCTGGTGACGGAGAGCCCGGACAAGAGAGCCATTCCTACGGCTG
ACGCCGAAGCCTATGCACGTGAAGCTGGTCTTCTGTTCTTTGAGACATCT
GCAAAGACCTCCTCCAACGTTAAGGAACTATTCACAGCAATCGCGAAGAA
ACTCCCTCTTGATCAGGCGGGTCCTCGAAACCTGCGCACAACTCCCCGTC
CTGGTGTTGACCTGCGGCCAGAAGCACCCGGTACCCAAGGTGCCGGTTCC
TGCAACTGCTAGGATCAATTTGATGATTACCGCGAGTCGACCATTGGCGC
CGCCTTCCTCACACAAACCATCTCCCTGGACGAAAGCACGACGGTTAAGT
TCGAGATATGGGATACAGCCGGCCAGGAGAGATACAAGTCTCTGGCCCCC
ATGTATTACAGAAACGCCAACTGCGCGGTCGTTGTGTACGATATCACTCA
GGCTAGTTCGCTAGTACTGAGATTCGTCAAGGAGAGTCCGCGGTCGGAAA
GATGGCCTCCAGAGCCGCAGCAGGCGCCCGTCCCGGGGCCAGGTTCGCTC
AGTTCAAGCTTGTATTGCTGGTCATCACTGGACAAGGCCAAGTCGTGGGT
GAAGGAATTGCAGCGTCAGGCAAATGAGAACATCGTCATCGCCCTTGCAG
GAAACAAGCTCGATCTGGTGACGGAGAGCCCGGACAAGAGAGCCATTCCT
ACGGCTGACGCCGAAGCCTATGCACGTGAAGCTGGTCTTCTGTTCTTTGA
GACATCTGCAAAGACCTCCTCCAACGTTAAGGAACTATTCACAGCAATCG
CGAAGAAACTCCCTCTTGATCAGGCGGGTCCTCGAAACCTGCGCACAACT
CCCCGTCCTGGTGTTGACCTGCGGCCAGAAGCACCCGGTACCCAAGGTGC
CGGTTCCTGCAACTGCTAGGATCAATTTGATGATTACCGCGAGTCGACCA
TTGGCGCCGCCTTCCTCACACAAACCATCTCCCTGGACGAAAGCACGACG
GTTAAGTTCGAGATATGGGATACAGCCGGCCAGGAGAGATACAAGTCTCT
GGCCCCCATGTATTACAGAAACGCCAACTGCGCGGTCGTTGTGTACGATA
TCACTCAGGCTAGTTCGCTAGTACTGAGATTCGTCAAGGAGAGTCCGCGG
TCGGAAAGATGGCCTCCAGAGCCGCAGCAGGCGCCCGTCCCGGGGCCAGG
TTCGCTCAGTTCAAGCTTGTATTGCTGGTCATCACTGGACAAGGCCAAGT
CGTGGGTGAAGGAATTGCAGCGTCAGGCAAATGAGAACATCGTCATCGCC
CTTGCAGGAAACAAGCTCGATCTGGTGACGGAGAGCCCGGACAAGAGAGC
CATTCCTACGGCTGACGCCGAAGCCTATGCACGTGAAGCTGGTCTTCTGT
TCTTTGAGACATCTGCAAAGACCTCCTCCAACGTTAAGGAACTATTCACA
GCAATCGCGAAGAAACTCCCTCTTGATCAGGCGGGTCCTCGAAACCTGCG
CACAACTCCCCGTCCTGGTGTTGACCTGCGGCCAGAAGCACCCGGTACCC
AAGGTGCCGGTTCCTGCAACTGCTAGGATCAATTTGATGATTACCGCGAG
TCGACCATTGGCGCCGCCTTCCTCACACAAACCATCTCCCTGGACGAAAG
CACGACGGTTAAGTTCGAGATATGGGATACAGCCGGCCAGGAGAGATACA
AGTCTCTGGCCCCCATGTATTACAGAAACGCCAACTGCGCGGTCGTTGTG
TACGATATCACTCAGGCTAGTTCGCTAGTACTGAGATTCGTCAAGGAGAG
TCCGCGGTCGGAAAGATGGCCTCCAGAGCCGCAGCAGGCGCCCGTCCCGG
GGCCAGGTTCGCTCAGTTCAAGCTTGTATTGCTGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005525 | GTP binding |
| GO:0003924 | GTPase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR005225 |
| DBxref | InterPro:IPR001806 |
| DBxref | PFAM:PF08477 |
| DBxref | PFAM:PF00071 |
| DBxref | PFAM:PF01926 |
| DBxref | PFAM:PF04670 |
| DBxref | PFAM:PF00025 |
| Product | GTPase Ypt5 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:637824..638770 - |
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