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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:646863..648868+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003160-T1 ID=CBS51388_003160-T1|Name=CBS51388_003160-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2006bp|location=Sequence derived from alignment at An04:646863..648868+ (Aspergillus niger CBS 513.88)
ATGGGACTGAGCCAGTCGACTGAGTATGGGGGCCAGACGTCCTCTTCAGG
TTAGTAGTCGTTGCCGTCTTTCGTAATGGAGCCATAATATCCCATCACAA
TGATAAAGATGGCTCTTCAGAGAAAAGCAACCCTGTCTCTGACAAGACCT
TAGAGGAGCTGAGCTACGTGCTTGCTGAACGGTTTGCAACTAAATGCTTC
ACTCCCTTGGAGTTGACTCATCTCAAAGACAACTTCTTTTCGCGTGCCAT
TGACCAAGGCGGCTTGAAGTACTGGAATGAGAAGACACTCTCGGATTTTC
TAGGGATTCCGGATAGCAGTGAATCCCACTGTCCTCTGGATGCGGGCCCG
GTGATCTTCCGTATGGTCTCGTACCTTGGGGCATTTCCCTTCCAGAACAC
GCTAGCTCCGAGTGTTCTAACGTTCGAAGCTATGGTGAAAGTCGTTGTTT
TGCTGACTGAGCGATACGGGAAAGTCCTAAGACGAGCGCGCAGGGATAGG
ATACGGCTTCTTTTCGGAAGCCTTGCTGATGTTGGAAGGAAGAGTGTTGA
ACAGCACACTAATGGCGATGAAGTGAGCGAGGATGCTGATGCACCTGCGC
CGAACTCTCATGTCCCAGGCTTTGCCATCGATGAGCCGGCCAACGATGAT
TATGAGGACGAGGAGGACGATGATCTAGCATTAGCTGCTTTGGAATCCTT
GGATGCCATTGAGGTCTTCAAGCACGATTCACGTATGGACAGGGCTGTCT
ACGAAGCTCGGATATCTGCCGATACGCTCCGTCGACTCTTGATGCTTCTA
ATAGTCATCTCGCCCTTAAAGCCCCTTGAGCCCGTAAAAATTTACACATC
CGATTTAACTGAAGAGCGCATGAAAGCAGTCCGGTCAGAAGCTGATGACA
TCATGGCAGCATTCAACCGTGAGCCTTCTGGTGGGATAAGCTATAAGGAA
TTTGCTCGGATTGTGACATCTTCGTTTCCGTATCTTTTCGATCCTCTGAC
ACCGCTGTTCGAACATCTCCTCTTCAGCAGAAATCTGAACCTATCCCAAA
AACGCAACAGGGCTGATTCTACGGCATCGGAGCCTGTCGAAGAAGAAGCC
CCAGAAGATGATCTACCTTCACCTCCAACGATTACGCTTCCGGGTAGCTT
TGAATCAGTGATACTTAACTCGAGCGTCATATCGCATCTGTCCTTCTTCC
TTCCGTCATCCTCGGAAAGCCTAAACTTCCTCCGCGGCAATGTGCGCCTG
CATCCAGTCTTCTCAACAGTCGCGCATGGCTCCTCTTTGACCTCCTTCTC
GCACCACGTGCTCACCTGGTCCTCAGGCACTCTACTCGTGCTCGAGGGAA
CTGACCCAACCGGCGAAATGTTAACCATCGGCGCCTACCTACCACAACCA
TGGAAATCACCAAATTCCACCCAGTCCAGCTCCAAATTCTCCAATTCCGT
TCTCCCATGTCTCTTCCAGCTCTCACCGAAACACCTACTCCTTCAAGGGA
ACCCCTCCTCAACCATCCAACAACAATCAAACATCCCGGCCGCATACTTC
TCCACCAGCTCGGGAATCTCAATAGGTTGCCAGATTCCCCCTTCATCGCG
CAGCAATCAAAAGCCCCCCACTCCGCACGGCGCAGGCAGCTTGACCATCG
ACGTTAGCCTCGAGACTGCCCAATTCCACGTCTCCCCCGTCGTCCGCAAC
GGCGTCTTCCTGCCCCCACCCCCAGGCTCTACTCCAGACACTACCGTCAA
AACCACCATCGAGATTTATAACTTAGAAGTATGGGGTCTCGTTCCCGACC
CTACAACCACGTCCGCAGAGGGCGGCAAAAGTGCCGTTGAACTTCAACAG
GCGAAATGGGACTTTGAAGCTCAGGAGGCTGAACGGAGACGCAGTGTGAA
TCTGAAGACTGGAGGCAGTGCCGCGGAGGAAAGCGCCAGATGGTTATTGG
AAACCGCCGGGTTGATCGGGGATGGTGCAGGGCGACGTGCCGGCGGGAGT
GTCTGA back to topCoding sequence (CDS) from alignment at An04:646863..648868+ >CBS51388_003160-T1 ID=CBS51388_003160-T1|Name=CBS51388_003160-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3870bp|location=Sequence derived from alignment at An04:646863..648868+ (Aspergillus niger CBS 513.88)
ATGGGACTGAGCCAGTCGACTGAGTATGGGGGCCAGACGTCCTCTTCAGA
GAAAAGCAACCCTGTCTCTGACAAGACCTTAGAGGAGCTGAGCTACGTGC
TTGCTGAACGGTTTGCAACTAAATGCTTCACTCCCTTGGAGTTGACTCAT
CTCAAAGACAACTTCTTTTCGCGTGCCATTGACCAAGGCGGCTTGAAGTA
CTGGAATGAGAAGACACTCTCGGATTTTCTAGGGATTCCGGATAGCAGTG
AATCCCACTGTCCTCTGGATGCGGGCCCGGTGATCTTCCGTATGGTCTCG
TACCTTGGGGCATTTCCCTTCCAGAACACGCTAGCTCCGAGTGTTCTAAC
GTTCGAAGCTATGGTGAAAGTCGTTGTTTTGCTGACTGAGCGATACGGGA
AAGTCCTAAGACGAGCGCGCAGGGATAGGATACGGCTTCTTTTCGGAAGC
CTTGCTGATGTTGGAAGGAAGAGTGTTGAACAGCACACTAATGGCGATGA
AGTGAGCGAGGATGCTGATGCACCTGCGCCGAACTCTCATGTCCCAGGCT
TTGCCATCGATGAGCCGGCCAACGATGATTATGAGGACGAGGAGGACGAT
GATCTAGCATTAGCTGCTTTGGAATCCTTGGATGCCATTGAGGTCTTCAA
GCACGATTCACGTATGGACAGGGCTGTCTACGAAGCTCGGATATCTGCCG
ATACGCTCCGTCGACTCTTGATGCTTCTAATAGTCATCTCGCCCTTAAAG
CCCCTTGAGCCCGTAAAAATTTACACATCCGATTTAACTGAAGAGCGCAT
GAAAGCAGTCCGGTCAGAAGCTGATGACATCATGGCAGCATTCAACCGTG
AGCCTTCTGGTGGGATAAGCTATAAGGAATTTGCTCGGATTGTGACATCT
TCGTTTCCGTATCTTTTCGATCCTCTGACACCGCTGTTCGAACATCTCCT
CTTCAGCAGAAATCTGAACCTATCCCAAAAACGCAACAGGGCTGATTCTA
CGGCATCGGAGCCTGTCGAAGAAGAAGCCCCAGAAGATGATCTACCTTCA
CCTCCAACGATTACGCTTCCGGGTAGCTTTGAATCAGTGATACTTAACTC
GAGCGTCATATCGCATCTGTCCTTCTTCCTTCCGTCATCCTCGGAAAGCC
TAAACTTCCTCCGCGGCAATGTGCGCCTGCATCCAGTCTTCTCAACAGTC
GCGCATGGCTCCTCTTTGACCTCCTTCTCGCACCACGTGCTCACCTGGTC
CTCAGGCACTCTACTCGTGCTCGAGGGAACTGACCCAACCGGCGAAATGT
TAACCATCGGCGCCTACCTACCACAACCATGGAAATCACCAAATTCCACC
CAGTCCAGCTCCAAATTCTCCAATTCCGTTCTCCCATGTCTCTTCCAGCT
CTCACCGAAACACCTACTCCTTCAAGGGAACCCCTCCTCAACCATCCAAC
AACAATCAAACATCCCGGCCGCATACTTCTCCACCAGCTCGGGAATCTCA
ATAGGTTGCCAGATTCCCCCTTCATCGCGCAGCAATCAAAAGCCCCCCAC
TCCGCACGGCGCAGGCAGCTTGACCATCGACGTTAGCCTCGAGACTGCCC
AATTCCACGTCTCCCCCGTCGTCCGCAACGGCGTCTTCCTGCCCCCACCC
CCAGGCTCTACTCCAGACACTACCGTCAAAACCACCATCGAGATTTATAA
CTTAGAAGTATGGGGTCTCGTTCCCGACCCTACAACCACGTCCGCAGAGG
GCGGCAAAAGTGCCGTTGAACTTCAACAGGCGAAATGGGACTTTGAAGCT
CAGGAGGCTGAACGGAGACGCAGTGTGAATCTGAAGACTGGAGGCAGTGC
CGCGGAGGAAAGCGCCAGATGGTTATTGGAAACCGCCGGGTTGATCGGGG
ATGGTGCAGGGCGACGTGCCGGCGGGAGTGTCTGAATGGGACTGAGCCAG
TCGACTGAGTATGGGGGCCAGACGTCCTCTTCAGAGAAAAGCAACCCTGT
CTCTGACAAGACCTTAGAGGAGCTGAGCTACGTGCTTGCTGAACGGTTTG
CAACTAAATGCTTCACTCCCTTGGAGTTGACTCATCTCAAAGACAACTTC
TTTTCGCGTGCCATTGACCAAGGCGGCTTGAAGTACTGGAATGAGAAGAC
ACTCTCGGATTTTCTAGGGATTCCGGATAGCAGTGAATCCCACTGTCCTC
TGGATGCGGGCCCGGTGATCTTCCGTATGGTCTCGTACCTTGGGGCATTT
CCCTTCCAGAACACGCTAGCTCCGAGTGTTCTAACGTTCGAAGCTATGGT
GAAAGTCGTTGTTTTGCTGACTGAGCGATACGGGAAAGTCCTAAGACGAG
CGCGCAGGGATAGGATACGGCTTCTTTTCGGAAGCCTTGCTGATGTTGGA
AGGAAGAGTGTTGAACAGCACACTAATGGCGATGAAGTGAGCGAGGATGC
TGATGCACCTGCGCCGAACTCTCATGTCCCAGGCTTTGCCATCGATGAGC
CGGCCAACGATGATTATGAGGACGAGGAGGACGATGATCTAGCATTAGCT
GCTTTGGAATCCTTGGATGCCATTGAGGTCTTCAAGCACGATTCACGTAT
GGACAGGGCTGTCTACGAAGCTCGGATATCTGCCGATACGCTCCGTCGAC
TCTTGATGCTTCTAATAGTCATCTCGCCCTTAAAGCCCCTTGAGCCCGTA
AAAATTTACACATCCGATTTAACTGAAGAGCGCATGAAAGCAGTCCGGTC
AGAAGCTGATGACATCATGGCAGCATTCAACCGTGAGCCTTCTGGTGGGA
TAAGCTATAAGGAATTTGCTCGGATTGTGACATCTTCGTTTCCGTATCTT
TTCGATCCTCTGACACCGCTGTTCGAACATCTCCTCTTCAGCAGAAATCT
GAACCTATCCCAAAAACGCAACAGGGCTGATTCTACGGCATCGGAGCCTG
TCGAAGAAGAAGCCCCAGAAGATGATCTACCTTCACCTCCAACGATTACG
CTTCCGGGTAGCTTTGAATCAGTGATACTTAACTCGAGCGTCATATCGCA
TCTGTCCTTCTTCCTTCCGTCATCCTCGGAAAGCCTAAACTTCCTCCGCG
GCAATGTGCGCCTGCATCCAGTCTTCTCAACAGTCGCGCATGGCTCCTCT
TTGACCTCCTTCTCGCACCACGTGCTCACCTGGTCCTCAGGCACTCTACT
CGTGCTCGAGGGAACTGACCCAACCGGCGAAATGTTAACCATCGGCGCCT
ACCTACCACAACCATGGAAATCACCAAATTCCACCCAGTCCAGCTCCAAA
TTCTCCAATTCCGTTCTCCCATGTCTCTTCCAGCTCTCACCGAAACACCT
ACTCCTTCAAGGGAACCCCTCCTCAACCATCCAACAACAATCAAACATCC
CGGCCGCATACTTCTCCACCAGCTCGGGAATCTCAATAGGTTGCCAGATT
CCCCCTTCATCGCGCAGCAATCAAAAGCCCCCCACTCCGCACGGCGCAGG
CAGCTTGACCATCGACGTTAGCCTCGAGACTGCCCAATTCCACGTCTCCC
CCGTCGTCCGCAACGGCGTCTTCCTGCCCCCACCCCCAGGCTCTACTCCA
GACACTACCGTCAAAACCACCATCGAGATTTATAACTTAGAAGTATGGGG
TCTCGTTCCCGACCCTACAACCACGTCCGCAGAGGGCGGCAAAAGTGCCG
TTGAACTTCAACAGGCGAAATGGGACTTTGAAGCTCAGGAGGCTGAACGG
AGACGCAGTGTGAATCTGAAGACTGGAGGCAGTGCCGCGGAGGAAAGCGC
CAGATGGTTATTGGAAACCGCCGGGTTGATCGGGGATGGTGCAGGGCGAC
GTGCCGGCGGGAGTGTCTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR006571 |
| DBxref | PFAM:PF07534 |
| Product | Restriction of telomere capping protein 5 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:646863..648868 + |
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