|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:774514..776320- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003212-T1 ID=CBS51388_003212-T1|Name=CBS51388_003212-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1807bp|location=Sequence derived from alignment at An04:774514..776320- (Aspergillus niger CBS 513.88)
ATGTCTGCACATAGCAATATGGATGACAAGGACATCGACGCAACGCACCA
TGAACTCGCTATGGAGAAATCCTTAAAGCATCATGGCAAAGGCAGTAACC
CAACCGGCACAGTGAAATTAGTCGAGGATGGAGAAATAGTGTTGATTCCG
ACGCCGTCTCCGGATCCAAGAGGTTTGATTCCTTCACAACCTGTTCGAGA
ATATCATATGGCTAACGAACAGTGAAACAGATCCCTTGAACTACCCTCAA
TGGCAAAAATGGATAATCACGTTCGTGCTGGGATTGTGTACGCTCCATCC
CTTCCCTCACTAGACAAACCACCATCTAATACGATCAATCTAGTCTCCGT
CCTCGGTGTTCTAATGACCTCCGGAATGGGCCCCTTCGTCACTTTAATGG
AAGCCTACTACGACTACAGCCCCCGAACCGACGATCTAATGACCTACCCA
ACCCTCTTTATGGGAATAGGGAACATCATCGCTATGCCACTCGCCATGGC
AATCGGCAGACGCCCAGTATTCCTAGGCTCTGCATTGATCCTGACCGTGG
GATCAATATGGTGCGCTGCGAGCACAAGTCTTTCGTCGCATATAGCGGGA
AGAGATGTGTTATCGTTGGCAGCAGGGCAATCAGAAGCCTTATGTCCTCT
TATCATCCAGGTACATCCACATCCCCATCCCATATCCTATGCTTCATAGA
CCGAATAATCTAATCAACATAATCCAGGAAATCCACTTCGTCCACGAACG
CAGCAGCCGACTCGCCTGGTTCAGTGCCATCCAATCCATCGGCACCGCCG
CCTTAACCATCGCCACATCCTACCTAGTAAGTAGCCTGGGCTGGAGATGG
TGGTACGGGGTATTCTCCATCGCCAGCGGACTAGTCTTCATCGGCGCATT
CACCCTAGTCCCCGAATCCCGCTATGACCGACCAACCGACGCCTTCGAAG
GCGAAGTGCACATCCATCACGACGGCGAAGAGCAAGCCGTCATCCACGCA
ACCACCAAGAACCGCGTACCCCTAGACTTCACCAACTACCAAGCCCGCAC
CTGGAAACACACTCTCAAAATCATGCACCCACCAGCGAACTGGGAAGAAG
CCCTAACATGCTACAAGCAAATGGGACAATGCATCCTGTTCCCTAACATC
CTCTGGGTGGTCCTAATGAACAGCGTCTCCCTCGGCATCTACGTTATCGG
AGTGACAGAATACTCCTCCATCCTAGGAGCCCCTCCATACAATTACCCAA
CAACAAGCCTAGGCCTAGTCCAGGGCGGGCAAATCGTGGTAGCGATGATA
ATGGTTCCCGTACTCGGCTACGGCGGCGATCAGCTATACAAATGGGTCGC
GAGCCGTCGAGGGAACGGCACCGTTGAGTCCGAGATTCGGCTCATCCCGA
TGCTATTGCCGATTGTCGTACTGCTTATTTCATGCGTTATCTTTGGCCGT
GCTGGATCTCATCCTACGGAGTGGTCGCCGTGGGCGATTACCACTACCTT
TAGCGGGATGTATTTCGCTTATATAGGAATTATTCTCAACGGGTACACGT
ATTCGTTGGATAGTTATGGAGAGCGAGCGGCGCCAATTCTGGTTCTGATT
TGTGCCATTCGCGGGTTTATTTCTTTTGGGATCTCGTTTGGGATTACGAA
GTTCGTGACTGAGAAGGGGTTCCAGGGTGCTTTGGATATTTGTGCGATCA
TTGCGGGTGTTGTGGCGGCGCTTGGAATTCCGGTTTTTGTCTTTGGGGCC
TGGATTAGAAGGGTTACGATGAAATATGCGGTGGATGGGAGGAGTGCGGA
GTTTTGA back to topCoding sequence (CDS) from alignment at An04:774514..776320- >CBS51388_003212-T1 ID=CBS51388_003212-T1|Name=CBS51388_003212-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6372bp|location=Sequence derived from alignment at An04:774514..776320- (Aspergillus niger CBS 513.88)
GTACATCCACATCCCCATCCCATATCCTATGCTTCATAGACCGAATAATC
TAATCAACATAATCCAGGAAATCCACTTCGTCCACGAACGCAGCAGCCGA
CTCGCCTGGTTCAGTGCCATCCAATCCATCGGCACCGCCGCCTTAACCAT
CGCCACATCCTACCTAGTAAGTAGCCTGGGCTGGAGATGGTGGTACGGGG
TATTCTCCATCGCCAGCGGACTAGTCTTCATCGGCGCATTCACCCTAGTC
CCCGAATCCCGCTATGACCGACCAACCGACGCCTTCGAAGGCGAAGTGCA
CATCCATCACGACGGCGAAGAGCAAGCCGTCATCCACGCAACCACCAAGA
ACCGCGTACCCCTAGACTTCACCAACTACCAAGCCCGCACCTGGAAACAC
ACTCTCAAAATCATGCACCCACCAGCGAACTGGGAAGAAGCCCTAACATG
CTACAAGCAAATGGGACAATGCATCCTGTTCCCTAACATCCTCTGGGTGG
TCCTAATGAACAGCGTCTCCCTCGGCATCTACGTTATCGGAGTGACAGAA
TACTCCTCCATCCTAGGAGCCCCTCCATACAATTACCCAACAACAAGCCT
AGGCCTAGTCCAGGGCGGGCAAATCGTGGTAGCGATGATAATGGTTCCCG
TACTCGGCTACGGCGGCGATCAGCTATACAAATGGGTCGCGAGCCGTCGA
GGGAACGGCACCGTTGAGTCCGAGATTCGGCTCATCCCGATGCTATTGCC
GATTGTCGTACTGCTTATTTCATGCGTTATCTTTGGCCGTGCTGGATCTC
ATCCTACGGAGTGGTCGCCGTGGGCGATTACCACTACCTTTAGCGGGATG
TATTTCGCTTATATAGGAATTATTCTCAACGGGTACACGTATTCGTTGGA
TAGTTATGGAGAGCGAGCGGCGCCAATTCTGGTTCTGATTTGTGCCATTC
GCGGGTTTATTTCTTTTGGGATCTCGTTTGGGATTACGAAGTTCGTGACT
GAGAAGGGGTTCCAGGGTGCTTTGGATATTTGTGCGATCATTGCGGGTGT
TGTGGCGGCGCTTGGAATTCCGGTTTTTGTCTTTGGGGCCTGGATTAGAA
GGGTTACGATGAAATATGCGGTGGATGGGAGGAGTGCGGAGTTTTGATCT
CCGTCCTCGGTGTTCTAATGACCTCCGGAATGGGCCCCTTCGTCACTTTA
ATGGAAGCCTACTACGACTACAGCCCCCGAACCGACGATCTAATGACCTA
CCCAACCCTCTTTATGGGAATAGGGAACATCATCGCTATGCCACTCGCCA
TGGCAATCGGCAGACGCCCAGTATTCCTAGGCTCTGCATTGATCCTGACC
GTGGGATCAATATGATCCCTTGAACTACCCTCAATGGCAAAAATGGATAA
TCACGTTCGTGCTGGGATTGTATGTCTGCACATAGCAATATGGATGACAA
GGACATCGACGCAACGCACCATGAACTCGCTATGGAGAAATCCTTAAAGC
ATCATGGCAAAGGCAGTAACCCAACCGGCACAGTGAAATTAGTCGAGGAT
GGAGAAATAGTGTTGATTCCGACGCCGTCTCCGGATCCAAGAGGTACATC
CACATCCCCATCCCATATCCTATGCTTCATAGACCGAATAATCTAATCAA
CATAATCCAGGAAATCCACTTCGTCCACGAACGCAGCAGCCGACTCGCCT
GGTTCAGTGCCATCCAATCCATCGGCACCGCCGCCTTAACCATCGCCACA
TCCTACCTAGTAAGTAGCCTGGGCTGGAGATGGTGGTACGGGGTATTCTC
CATCGCCAGCGGACTAGTCTTCATCGGCGCATTCACCCTAGTCCCCGAAT
CCCGCTATGACCGACCAACCGACGCCTTCGAAGGCGAAGTGCACATCCAT
CACGACGGCGAAGAGCAAGCCGTCATCCACGCAACCACCAAGAACCGCGT
ACCCCTAGACTTCACCAACTACCAAGCCCGCACCTGGAAACACACTCTCA
AAATCATGCACCCACCAGCGAACTGGGAAGAAGCCCTAACATGCTACAAG
CAAATGGGACAATGCATCCTGTTCCCTAACATCCTCTGGGTGGTCCTAAT
GAACAGCGTCTCCCTCGGCATCTACGTTATCGGAGTGACAGAATACTCCT
CCATCCTAGGAGCCCCTCCATACAATTACCCAACAACAAGCCTAGGCCTA
GTCCAGGGCGGGCAAATCGTGGTAGCGATGATAATGGTTCCCGTACTCGG
CTACGGCGGCGATCAGCTATACAAATGGGTCGCGAGCCGTCGAGGGAACG
GCACCGTTGAGTCCGAGATTCGGCTCATCCCGATGCTATTGCCGATTGTC
GTACTGCTTATTTCATGCGTTATCTTTGGCCGTGCTGGATCTCATCCTAC
GGAGTGGTCGCCGTGGGCGATTACCACTACCTTTAGCGGGATGTATTTCG
CTTATATAGGAATTATTCTCAACGGGTACACGTATTCGTTGGATAGTTAT
GGAGAGCGAGCGGCGCCAATTCTGGTTCTGATTTGTGCCATTCGCGGGTT
TATTTCTTTTGGGATCTCGTTTGGGATTACGAAGTTCGTGACTGAGAAGG
GGTTCCAGGGTGCTTTGGATATTTGTGCGATCATTGCGGGTGTTGTGGCG
GCGCTTGGAATTCCGGTTTTTGTCTTTGGGGCCTGGATTAGAAGGGTTAC
GATGAAATATGCGGTGGATGGGAGGAGTGCGGAGTTTTGATCTCCGTCCT
CGGTGTTCTAATGACCTCCGGAATGGGCCCCTTCGTCACTTTAATGGAAG
CCTACTACGACTACAGCCCCCGAACCGACGATCTAATGACCTACCCAACC
CTCTTTATGGGAATAGGGAACATCATCGCTATGCCACTCGCCATGGCAAT
CGGCAGACGCCCAGTATTCCTAGGCTCTGCATTGATCCTGACCGTGGGAT
CAATATGATCCCTTGAACTACCCTCAATGGCAAAAATGGATAATCACGTT
CGTGCTGGGATTGTATGTCTGCACATAGCAATATGGATGACAAGGACATC
GACGCAACGCACCATGAACTCGCTATGGAGAAATCCTTAAAGCATCATGG
CAAAGGCAGTAACCCAACCGGCACAGTGAAATTAGTCGAGGATGGAGAAA
TAGTGTTGATTCCGACGCCGTCTCCGGATCCAAGAGGTACATCCACATCC
CCATCCCATATCCTATGCTTCATAGACCGAATAATCTAATCAACATAATC
CAGGAAATCCACTTCGTCCACGAACGCAGCAGCCGACTCGCCTGGTTCAG
TGCCATCCAATCCATCGGCACCGCCGCCTTAACCATCGCCACATCCTACC
TAGTAAGTAGCCTGGGCTGGAGATGGTGGTACGGGGTATTCTCCATCGCC
AGCGGACTAGTCTTCATCGGCGCATTCACCCTAGTCCCCGAATCCCGCTA
TGACCGACCAACCGACGCCTTCGAAGGCGAAGTGCACATCCATCACGACG
GCGAAGAGCAAGCCGTCATCCACGCAACCACCAAGAACCGCGTACCCCTA
GACTTCACCAACTACCAAGCCCGCACCTGGAAACACACTCTCAAAATCAT
GCACCCACCAGCGAACTGGGAAGAAGCCCTAACATGCTACAAGCAAATGG
GACAATGCATCCTGTTCCCTAACATCCTCTGGGTGGTCCTAATGAACAGC
GTCTCCCTCGGCATCTACGTTATCGGAGTGACAGAATACTCCTCCATCCT
AGGAGCCCCTCCATACAATTACCCAACAACAAGCCTAGGCCTAGTCCAGG
GCGGGCAAATCGTGGTAGCGATGATAATGGTTCCCGTACTCGGCTACGGC
GGCGATCAGCTATACAAATGGGTCGCGAGCCGTCGAGGGAACGGCACCGT
TGAGTCCGAGATTCGGCTCATCCCGATGCTATTGCCGATTGTCGTACTGC
TTATTTCATGCGTTATCTTTGGCCGTGCTGGATCTCATCCTACGGAGTGG
TCGCCGTGGGCGATTACCACTACCTTTAGCGGGATGTATTTCGCTTATAT
AGGAATTATTCTCAACGGGTACACGTATTCGTTGGATAGTTATGGAGAGC
GAGCGGCGCCAATTCTGGTTCTGATTTGTGCCATTCGCGGGTTTATTTCT
TTTGGGATCTCGTTTGGGATTACGAAGTTCGTGACTGAGAAGGGGTTCCA
GGGTGCTTTGGATATTTGTGCGATCATTGCGGGTGTTGTGGCGGCGCTTG
GAATTCCGGTTTTTGTCTTTGGGGCCTGGATTAGAAGGGTTACGATGAAA
TATGCGGTGGATGGGAGGAGTGCGGAGTTTTGATCTCCGTCCTCGGTGTT
CTAATGACCTCCGGAATGGGCCCCTTCGTCACTTTAATGGAAGCCTACTA
CGACTACAGCCCCCGAACCGACGATCTAATGACCTACCCAACCCTCTTTA
TGGGAATAGGGAACATCATCGCTATGCCACTCGCCATGGCAATCGGCAGA
CGCCCAGTATTCCTAGGCTCTGCATTGATCCTGACCGTGGGATCAATATG
ATCCCTTGAACTACCCTCAATGGCAAAAATGGATAATCACGTTCGTGCTG
GGATTGTATGTCTGCACATAGCAATATGGATGACAAGGACATCGACGCAA
CGCACCATGAACTCGCTATGGAGAAATCCTTAAAGCATCATGGCAAAGGC
AGTAACCCAACCGGCACAGTGAAATTAGTCGAGGATGGAGAAATAGTGTT
GATTCCGACGCCGTCTCCGGATCCAAGAGGTACATCCACATCCCCATCCC
ATATCCTATGCTTCATAGACCGAATAATCTAATCAACATAATCCAGGAAA
TCCACTTCGTCCACGAACGCAGCAGCCGACTCGCCTGGTTCAGTGCCATC
CAATCCATCGGCACCGCCGCCTTAACCATCGCCACATCCTACCTAGTAAG
TAGCCTGGGCTGGAGATGGTGGTACGGGGTATTCTCCATCGCCAGCGGAC
TAGTCTTCATCGGCGCATTCACCCTAGTCCCCGAATCCCGCTATGACCGA
CCAACCGACGCCTTCGAAGGCGAAGTGCACATCCATCACGACGGCGAAGA
GCAAGCCGTCATCCACGCAACCACCAAGAACCGCGTACCCCTAGACTTCA
CCAACTACCAAGCCCGCACCTGGAAACACACTCTCAAAATCATGCACCCA
CCAGCGAACTGGGAAGAAGCCCTAACATGCTACAAGCAAATGGGACAATG
CATCCTGTTCCCTAACATCCTCTGGGTGGTCCTAATGAACAGCGTCTCCC
TCGGCATCTACGTTATCGGAGTGACAGAATACTCCTCCATCCTAGGAGCC
CCTCCATACAATTACCCAACAACAAGCCTAGGCCTAGTCCAGGGCGGGCA
AATCGTGGTAGCGATGATAATGGTTCCCGTACTCGGCTACGGCGGCGATC
AGCTATACAAATGGGTCGCGAGCCGTCGAGGGAACGGCACCGTTGAGTCC
GAGATTCGGCTCATCCCGATGCTATTGCCGATTGTCGTACTGCTTATTTC
ATGCGTTATCTTTGGCCGTGCTGGATCTCATCCTACGGAGTGGTCGCCGT
GGGCGATTACCACTACCTTTAGCGGGATGTATTTCGCTTATATAGGAATT
ATTCTCAACGGGTACACGTATTCGTTGGATAGTTATGGAGAGCGAGCGGC
GCCAATTCTGGTTCTGATTTGTGCCATTCGCGGGTTTATTTCTTTTGGGA
TCTCGTTTGGGATTACGAAGTTCGTGACTGAGAAGGGGTTCCAGGGTGCT
TTGGATATTTGTGCGATCATTGCGGGTGTTGTGGCGGCGCTTGGAATTCC
GGTTTTTGTCTTTGGGGCCTGGATTAGAAGGGTTACGATGAAATATGCGG
TGGATGGGAGGAGTGCGGAGTTTTGATCTCCGTCCTCGGTGTTCTAATGA
CCTCCGGAATGGGCCCCTTCGTCACTTTAATGGAAGCCTACTACGACTAC
AGCCCCCGAACCGACGATCTAATGACCTACCCAACCCTCTTTATGGGAAT
AGGGAACATCATCGCTATGCCACTCGCCATGGCAATCGGCAGACGCCCAG
TATTCCTAGGCTCTGCATTGATCCTGACCGTGGGATCAATATGATCCCTT
GAACTACCCTCAATGGCAAAAATGGATAATCACGTTCGTGCTGGGATTGT
ATGTCTGCACATAGCAATATGGATGACAAGGACATCGACGCAACGCACCA
TGAACTCGCTATGGAGAAATCCTTAAAGCATCATGGCAAAGGCAGTAACC
CAACCGGCACAGTGAAATTAGTCGAGGATGGAGAAATAGTGTTGATTCCG
ACGCCGTCTCCGGATCCAAGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:774514..776320 - |
|
