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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:776896..777993- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003213-T1 ID=CBS51388_003213-T1|Name=CBS51388_003213-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1098bp|location=Sequence derived from alignment at An04:776896..777993- (Aspergillus niger CBS 513.88)
ATGGCACCCTCCCGTGTCGACACTCCGGAGCCCATCCCATCCCCTGCCCC
GGGGAAGCTTCAGTCCATCCAGACACAGCAGCCTCAATATGGTGACTTCC
GTGATGACTTCTTTCGTGACGGTTACGCTGTCATCAAAGGCGTGCTGAGC
AAAGAGCGCGCCAGCGAATACCAAAGCGAAGCCCTGACCTGGCTCGAATC
ATTCGGCCTTGGCTTTGATCGCAACGACAAGTCCACCTGGAAGAAGGAAA
ACCTCCCACAGAGCTGGAAAGGCGGCATGTACCTGCACTTCTCTGCTGCG
CACGAGAAGTATGTCTGGGACGTCCGGTGGTAAGTCACGTCTCTCTTCCC
TCCTCTCTAGAGATCCATCTTGCTAAACCATGGCTACAGCGAGCCAGACG
TCATTGCTCCCTTCGCCAAACTCTGGGGCACCGACGAGCTCGTCGTCTCC
TTCGACACAGTGAACATCACCCTCCCTCAATCCATTGTAGGCGCCTACGA
TTCTCAGCCCTGGCCCCACTGCGACCAAGCGCCCGAACGCAAAGGTCTGG
TCTGTGTCCAGGGCATTGTCAATCTCTCTAACTCGGGCCCCGATGACGGT
GGACTCATTGTAATGAAGGGTTCCGCGCCGCTCTTTGACCAATTCTTCGA
AGAGAACCCGGTCACTGGCCCCACGCCCTGGCGCACCGCCAAACACAAGG
ACTTCCATCCCTTCCATGACAAGGATTTAGACTGGTACCGCGAGCGTGGG
TGCGAGTTGATCAAGGTCTGTGCTGAACCAGGAGATTTGATCCTTTGGGA
CTCCAGACAGATGCACTGGGCTCAGTTCGGGACCTCGGATCTGGTGCGCA
CCATTGTTTATGCGACATATACGCCGGCGGCGTGGATGAGTGAGGAGGAT
CGGCAGAAGAAGAAAGAATTATTCGAGGCATATGAGACAACTACACACTG
GCCGCATACGAACTTGTTCACACATGGGAAGGCGATGGTGCAAGTGGATG
GAGAGGAAGTGGTGGATCCGTTGGAGAGGGACGAACCTCTTACCAAGCCG
GTGAGGAGTGAGAGACTGTTGCAGTTGGCAGGTGTGAAGCCGTACTAG back to topCoding sequence (CDS) from alignment at An04:776896..777993- >CBS51388_003213-T1 ID=CBS51388_003213-T1|Name=CBS51388_003213-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2076bp|location=Sequence derived from alignment at An04:776896..777993- (Aspergillus niger CBS 513.88)
CGAGCCAGACGTCATTGCTCCCTTCGCCAAACTCTGGGGCACCGACGAGC
TCGTCGTCTCCTTCGACACAGTGAACATCACCCTCCCTCAATCCATTGTA
GGCGCCTACGATTCTCAGCCCTGGCCCCACTGCGACCAAGCGCCCGAACG
CAAAGGTCTGGTCTGTGTCCAGGGCATTGTCAATCTCTCTAACTCGGGCC
CCGATGACGGTGGACTCATTGTAATGAAGGGTTCCGCGCCGCTCTTTGAC
CAATTCTTCGAAGAGAACCCGGTCACTGGCCCCACGCCCTGGCGCACCGC
CAAACACAAGGACTTCCATCCCTTCCATGACAAGGATTTAGACTGGTACC
GCGAGCGTGGGTGCGAGTTGATCAAGGTCTGTGCTGAACCAGGAGATTTG
ATCCTTTGGGACTCCAGACAGATGCACTGGGCTCAGTTCGGGACCTCGGA
TCTGGTGCGCACCATTGTTTATGCGACATATACGCCGGCGGCGTGGATGA
GTGAGGAGGATCGGCAGAAGAAGAAAGAATTATTCGAGGCATATGAGACA
ACTACACACTGGCCGCATACGAACTTGTTCACACATGGGAAGGCGATGGT
GCAAGTGGATGGAGAGGAAGTGGTGGATCCGTTGGAGAGGGACGAACCTC
TTACCAAGCCGGTGAGGAGTGAGAGACTGTTGCAGTTGGCAGGTGTGAAG
CCGTACTAGATGGCACCCTCCCGTGTCGACACTCCGGAGCCCATCCCATC
CCCTGCCCCGGGGAAGCTTCAGTCCATCCAGACACAGCAGCCTCAATATG
GTGACTTCCGTGATGACTTCTTTCGTGACGGTTACGCTGTCATCAAAGGC
GTGCTGAGCAAAGAGCGCGCCAGCGAATACCAAAGCGAAGCCCTGACCTG
GCTCGAATCATTCGGCCTTGGCTTTGATCGCAACGACAAGTCCACCTGGA
AGAAGGAAAACCTCCCACAGAGCTGGAAAGGCGGCATGTACCTGCACTTC
TCTGCTGCGCACGAGAAGTATGTCTGGGACGTCCGGTGCGAGCCAGACGT
CATTGCTCCCTTCGCCAAACTCTGGGGCACCGACGAGCTCGTCGTCTCCT
TCGACACAGTGAACATCACCCTCCCTCAATCCATTGTAGGCGCCTACGAT
TCTCAGCCCTGGCCCCACTGCGACCAAGCGCCCGAACGCAAAGGTCTGGT
CTGTGTCCAGGGCATTGTCAATCTCTCTAACTCGGGCCCCGATGACGGTG
GACTCATTGTAATGAAGGGTTCCGCGCCGCTCTTTGACCAATTCTTCGAA
GAGAACCCGGTCACTGGCCCCACGCCCTGGCGCACCGCCAAACACAAGGA
CTTCCATCCCTTCCATGACAAGGATTTAGACTGGTACCGCGAGCGTGGGT
GCGAGTTGATCAAGGTCTGTGCTGAACCAGGAGATTTGATCCTTTGGGAC
TCCAGACAGATGCACTGGGCTCAGTTCGGGACCTCGGATCTGGTGCGCAC
CATTGTTTATGCGACATATACGCCGGCGGCGTGGATGAGTGAGGAGGATC
GGCAGAAGAAGAAAGAATTATTCGAGGCATATGAGACAACTACACACTGG
CCGCATACGAACTTGTTCACACATGGGAAGGCGATGGTGCAAGTGGATGG
AGAGGAAGTGGTGGATCCGTTGGAGAGGGACGAACCTCTTACCAAGCCGG
TGAGGAGTGAGAGACTGTTGCAGTTGGCAGGTGTGAAGCCGTACTAGATG
GCACCCTCCCGTGTCGACACTCCGGAGCCCATCCCATCCCCTGCCCCGGG
GAAGCTTCAGTCCATCCAGACACAGCAGCCTCAATATGGTGACTTCCGTG
ATGACTTCTTTCGTGACGGTTACGCTGTCATCAAAGGCGTGCTGAGCAAA
GAGCGCGCCAGCGAATACCAAAGCGAAGCCCTGACCTGGCTCGAATCATT
CGGCCTTGGCTTTGATCGCAACGACAAGTCCACCTGGAAGAAGGAAAACC
TCCCACAGAGCTGGAAAGGCGGCATGTACCTGCACTTCTCTGCTGCGCAC
GAGAAGTATGTCTGGGACGTCCGGTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008775 |
| DBxref | PFAM:PF05721 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:776896..777993 - |
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