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CBS51388_003217-T1, CBS51388_003217-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_003217-T1
Unique NameCBS51388_003217-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An04:785491..786443+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_003217-T1 ID=CBS51388_003217-T1|Name=CBS51388_003217-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=953bp|location=Sequence derived from alignment at An04:785491..786443+ (Aspergillus niger CBS 513.88)
ATGGACGCGATCCAGAAAACCATCGTCGATCCCCTCCAACCCCTCCTCCG
CCCCGTCGTTTCGGCCTTGCCCGAACCGGTTCACGATGCGATCATTTCGC
TGATCGGCTCCTCCTGCCACAACAGCCTCGTGGTCGATCTTGACGTGAGC
AAGGACCCGGCGTGCACCTCCCTTGCTATTTCGAAGGCACTTGGTATTGC
TATCGTCGGAGCTAGCGGCATTGTCAAGGTGCCCCAGATCCTCAAGCTGA
TCGGCTCCCGCTCATCTGCCGGTGTTTCCTTCGTTTCGTACGCCCTCGAG
ACCGCCAGTCTTCTGATTACGCTGTCATAAAGCGTGCGCAACCAGTTCCC
GTTCAGCACCTTCGGCGAGACGGCTTTGATTGCGGTACAAGATGTAGTCG
TGGGCATGCTGGTATTGACATTTGCGGGCCGGTCTTCCGCTGCGGCGGCC
TTCATTGCCGTCGTGGCAGCAAGCGTGTATGCGCTGCTTTTTGATCAGAC
TCTGGTGGATGCGCAGACAATGGCTATGCTGCAGGCTGGAGCTGGAGCTC
TGGGTGTTGCGAGCAAGGCGCCTCAAATCTATACTATCTGGCGTGAAGGT
GGCACTGGCCAGCTGAGTGCTTTTGCAGTAGGTGCACCTCGTTACTTGTC
GGTAATTGTTTACTAACACATAGTCAGGTCTTCAACTATCTCGCTGGTTC
CCTGTCTCGCATCTTCACCACCCTCCAAGAGGTTGACGACAAGCTGATCC
TGTACGGCTTCATTGCCGGGTTCACTCTCAACCTCATTCTGGCCGGCCAA
ATGCTGTACTACTGGAACAGCCCGGCCAAGTCCCAGAAGAAGGAGAAGCC
CGTGGCAGCACCTACTCCCGCCAAGACGCCAATTGCTGCCACCAGCTCGG
GGGTGTCCCCAAAGCCATCAGGCAAGACGCCCACCACTCGACGCCGGGGC
TAG
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Coding sequence (CDS) from alignment at An04:785491..786443+

>CBS51388_003217-T1 ID=CBS51388_003217-T1|Name=CBS51388_003217-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2574bp|location=Sequence derived from alignment at An04:785491..786443+ (Aspergillus niger CBS 513.88)
ATGGACGCGATCCAGAAAACCATCGTCGATCCCCTCCAACCCCTCCTCCG
CCCCGTCGTTTCGGCCTTGCCCGAACCGGTTCACGATGCGATCATTTCGC
TGATCGGCTCCTCCTGCCACAACAGCCTCGTGGTCGATCTTGACGTGAGC
AAGGACCCGGCGTGCACCTCCCTTGCTATTTCGAAGGCACTTGGTATTGC
TATCGTCGGAGCTAGCGGCATTGTCAAGGTGCCCCAGATCCTCAAGCTGA
TCGGCTCCCGCTCATCTGCCGGTGTTTCCTTCGTTTCCGTGCGCAACCAG
TTCCCGTTCAGCACCTTCGGCGAGACGGCTTTGATTGCGGTACAAGATGT
AGTCGTGGGCATGCTGGTATTGACATTTGCGGGCCGGTCTTCCGCTGCGG
CGGCCTTCATTGCCGTCGTGGCAGCAAGCGTGTATGCGCTGCTTTTTGAT
CAGACTCTGGTGGATGCGCAGACAATGGCTATGCTGCAGGCTGGAGCTGG
AGCTCTGGGTGTTGCGAGCAAGGCGCCTCAAATCTATACTATCTGGCGTG
AAGGTGGCACTGGCCAGCTGAGTGCTTTTGCAGTCTTCAACTATCTCGCT
GGTTCCCTGTCTCGCATCTTCACCACCCTCCAAGAGGTTGACGACAAGCT
GATCCTGTACGGCTTCATTGCCGGGTTCACTCTCAACCTCATTCTGGCCG
GCCAAATGCTGTACTACTGGAACAGCCCGGCCAAGTCCCAGAAGAAGGAG
AAGCCCGTGGCAGCACCTACTCCCGCCAAGACGCCAATTGCTGCCACCAG
CTCGGGGGTGTCCCCAAAGCCATCAGGCAAGACGCCCACCACTCGACGCC
GGGGCTAGATGGACGCGATCCAGAAAACCATCGTCGATCCCCTCCAACCC
CTCCTCCGCCCCGTCGTTTCGGCCTTGCCCGAACCGGTTCACGATGCGAT
CATTTCGCTGATCGGCTCCTCCTGCCACAACAGCCTCGTGGTCGATCTTG
ACGTGAGCAAGGACCCGGCGTGCACCTCCCTTGCTATTTCGAAGGCACTT
GGTATTGCTATCGTCGGAGCTAGCGGCATTGTCAAGGTGCCCCAGATCCT
CAAGCTGATCGGCTCCCGCTCATCTGCCGGTGTTTCCTTCGTTTCCGTGC
GCAACCAGTTCCCGTTCAGCACCTTCGGCGAGACGGCTTTGATTGCGGTA
CAAGATGTAGTCGTGGGCATGCTGGTATTGACATTTGCGGGCCGGTCTTC
CGCTGCGGCGGCCTTCATTGCCGTCGTGGCAGCAAGCGTGTATGCGCTGC
TTTTTGATCAGACTCTGGTGGATGCGCAGACAATGGCTATGCTGCAGGCT
GGAGCTGGAGCTCTGGGTGTTGCGAGCAAGGCGCCTCAAATCTATACTAT
CTGGCGTGAAGGTGGCACTGGCCAGCTGAGTGCTTTTGCAGTCTTCAACT
ATCTCGCTGGTTCCCTGTCTCGCATCTTCACCACCCTCCAAGAGGTTGAC
GACAAGCTGATCCTGTACGGCTTCATTGCCGGGTTCACTCTCAACCTCAT
TCTGGCCGGCCAAATGCTGTACTACTGGAACAGCCCGGCCAAGTCCCAGA
AGAAGGAGAAGCCCGTGGCAGCACCTACTCCCGCCAAGACGCCAATTGCT
GCCACCAGCTCGGGGGTGTCCCCAAAGCCATCAGGCAAGACGCCCACCAC
TCGACGCCGGGGCTAGATGGACGCGATCCAGAAAACCATCGTCGATCCCC
TCCAACCCCTCCTCCGCCCCGTCGTTTCGGCCTTGCCCGAACCGGTTCAC
GATGCGATCATTTCGCTGATCGGCTCCTCCTGCCACAACAGCCTCGTGGT
CGATCTTGACGTGAGCAAGGACCCGGCGTGCACCTCCCTTGCTATTTCGA
AGGCACTTGGTATTGCTATCGTCGGAGCTAGCGGCATTGTCAAGGTGCCC
CAGATCCTCAAGCTGATCGGCTCCCGCTCATCTGCCGGTGTTTCCTTCGT
TTCCGTGCGCAACCAGTTCCCGTTCAGCACCTTCGGCGAGACGGCTTTGA
TTGCGGTACAAGATGTAGTCGTGGGCATGCTGGTATTGACATTTGCGGGC
CGGTCTTCCGCTGCGGCGGCCTTCATTGCCGTCGTGGCAGCAAGCGTGTA
TGCGCTGCTTTTTGATCAGACTCTGGTGGATGCGCAGACAATGGCTATGC
TGCAGGCTGGAGCTGGAGCTCTGGGTGTTGCGAGCAAGGCGCCTCAAATC
TATACTATCTGGCGTGAAGGTGGCACTGGCCAGCTGAGTGCTTTTGCAGT
CTTCAACTATCTCGCTGGTTCCCTGTCTCGCATCTTCACCACCCTCCAAG
AGGTTGACGACAAGCTGATCCTGTACGGCTTCATTGCCGGGTTCACTCTC
AACCTCATTCTGGCCGGCCAAATGCTGTACTACTGGAACAGCCCGGCCAA
GTCCCAGAAGAAGGAGAAGCCCGTGGCAGCACCTACTCCCGCCAAGACGC
CAATTGCTGCCACCAGCTCGGGGGTGTCCCCAAAGCCATCAGGCAAGACG
CCCACCACTCGACGCCGGGGCTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_003217CBS51388_003217Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003217-T1.exon1CBS51388_003217-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_003217-T1.exon2CBS51388_003217-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_003217-T1.exon3CBS51388_003217-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003217-T1.cdsCBS51388_003217-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003217-T1CBS51388_003217-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR016817
DBxrefInterPro:IPR006603
DBxrefPFAM:PF04193
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An04supercontigAn04:785491..786443 +
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