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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:836119..838179- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003235-T1 ID=CBS51388_003235-T1|Name=CBS51388_003235-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2061bp|location=Sequence derived from alignment at An04:836119..838179- (Aspergillus niger CBS 513.88)
ATGTCGAATCCTACGCAGCCTTTCGACTCTCGGCGGGCGACAAGCTACGG
TCGACCTGAGGAGCTCCATATTCCATCTGCGGGCCCCAATCTGCAGCGAC
AATCGATGTCTCACGAATACCCCGCTGGTCAAGACAACCCTGTCCCTTCT
ATCAACGTTCATTCATTGGGGTCACAACCGGGTCAGTATGGTGGTGGTGG
AAGCAGCGGCGCGAGCGGAGTACTCCCGGGAGCGCTTCAGCCGGGCAACG
TCAACCGTCCACCTGCAGTATCAGTCAACACTGCACCTTCGGCGCTACCA
ACCCTACCAGAGCTGAATACCCCAATGCAGCCAACATCACAATCAGGACA
ACAGCCACCGTCTGCGCAACAACAGCAAACGCCCCAACAGCAGCAGCCGA
ATGCCCGCGCCAGTATGGTCAACTCTCATGGGCATTCTAGATCCAGCCCA
GCAGGGTTTGAGCAGCCAAAATACAGACAGCCAGGCTCCTCTCCAGGCTC
TGCATATCCTCCCCATACTCCCCAGGGTACAAAATACTCGCCGTTGGGTC
TAGCCGACATCCGACCGACAGGAGACCTTCTGGGTGACCCAATCACCAGC
TCCGGAATGGCACCGTTCAACGGGGATAATCCGGTACCTACCAATAGCAA
CTACATTGCTCCTTGGCCTATATATTCTATGGATTGGTGTAAATGGCCTA
TTACGGGGAGCTCCAGCTCGTTCGGGGGCAAAATCGCCTTGGGAAGCTAC
CTAGAGGACAACCACAACTACGTACGCATATACCTGCCACTTCCCCCTGG
TCATCTTCGCAGCTTCATATTGTGCTAATCTGGGGAATAGATACAAATTA
TAGATACTCATTGGACACAACCAGACCCGGATACGCCGGACGCCGCTGCG
GGGGAGATTAAACTCGACTATGTGAAGACCGCAGAGGCCACCCATTCGTA
TCCAGTAACACGGATCCTCTGGGAGCCGCCATCATCTCAGAAACAGTCTA
CCGATCTGTTGGCCACATCTGGTGATCATCTGCGATTATGGTCGCTGCCA
ACGGCGCAACCCGTACCAAGTTCCAACTCCATTACGCGGTCGGCCAGCCA
ACACGCACCGACAGCGAAACTGTCGCCGCTGGCTTTGCTCTCAAATTCCA
AGTCACCCGAGCATACCGCTCCAATCACCTCATTGGACTGGAATACAATT
TCCCCCAGTCTGATCATTACCTCCAGTATCGATACCACCTGCACAATCTG
GGATATTCCCACCCTTACCGCCAAGACACAGCTGATCGCACATGACAAAG
AGGTATACGATGTTCGATTCTGTGCGAATAGCGTGGACGTCTTTGTCAGC
TGTGGTGCTGATGGTAGTGTGCGCATGTTCGATCTCCGCAGCCTAGAACA
TAGCACTATCATCTACGAGCCCACCGAGAAGCATGAGAAGGGTAATGCCA
ATTCTTTCTTTACCAGAACCTGAATAGTACACTAACGGGTACATGCACTA
GTCCCCACTCCGGGCAATGGCAGTCCTTCTGGGCAAGCCCAGCCCGTATG
GCCCCCGCCTCTACTACGCATCGCTGGTATGTATCTGGTCGAGCTGGCTG
GTTGCCATTGACACTGGACGCTAACTGTCATAGCATCGCCCCATGATTCC
CACCTTCTTGCCACTTTCTCGCAAGATTCCAACATTGTCCGGGTTCTAGA
TGTCCGGCAGCCTGGACAGGCTCTTCTTGAACTGAAGGGCCACGGCTCCT
CCATCAACTGCGTTGAGTGGTCGCCCAACCGCCGCGGAGTCCTGGCTTCT
GGTGCGGACGACTGCTTCGTACTTCTGTGGGACCTCATCAACCAGCACAA
TGCGGCTCCTGTGCCTCCCATGCCTCCCGTCCCGCACAATGCGGGCACGC
CCGCGACACCCAGTGAGCGAGGTCCAGCCGCCGTGTGGCTCTGCGACAAC
GAAGTGTCGAACATTAGCTGGTCGCCGCAGGGCGGTACCACGCCTGCCGG
GCATCCGCGCGACTGGCTCGGGGTCTGCGGTGGACGTGGACTATGGGGAG
TGGCACTGTAG back to topCoding sequence (CDS) from alignment at An04:836119..838179- >CBS51388_003235-T1 ID=CBS51388_003235-T1|Name=CBS51388_003235-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7500bp|location=Sequence derived from alignment at An04:836119..838179- (Aspergillus niger CBS 513.88)
CATCGCCCCATGATTCCCACCTTCTTGCCACTTTCTCGCAAGATTCCAAC
ATTGTCCGGGTTCTAGATGTCCGGCAGCCTGGACAGGCTCTTCTTGAACT
GAAGGGCCACGGCTCCTCCATCAACTGCGTTGAGTGGTCGCCCAACCGCC
GCGGAGTCCTGGCTTCTGGTGCGGACGACTGCTTCGTACTTCTGTGGGAC
CTCATCAACCAGCACAATGCGGCTCCTGTGCCTCCCATGCCTCCCGTCCC
GCACAATGCGGGCACGCCCGCGACACCCAGTGAGCGAGGTCCAGCCGCCG
TGTGGCTCTGCGACAACGAAGTGTCGAACATTAGCTGGTCGCCGCAGGGC
GGTACCACGCCTGCCGGGCATCCGCGCGACTGGCTCGGGGTCTGCGGTGG
ACGTGGACTATGGGGAGTGGCACTGTAGTCCCCACTCCGGGCAATGGCAG
TCCTTCTGGGCAAGCCCAGCCCGTATGGCCCCCGCCTCTACTACGCATCG
CTGATACAAATTATAGATACTCATTGGACACAACCAGACCCGGATACGCC
GGACGCCGCTGCGGGGGAGATTAAACTCGACTATGTGAAGACCGCAGAGG
CCACCCATTCGTATCCAGTAACACGGATCCTCTGGGAGCCGCCATCATCT
CAGAAACAGTCTACCGATCTGTTGGCCACATCTGGTGATCATCTGCGATT
ATGGTCGCTGCCAACGGCGCAACCCGTACCAAGTTCCAACTCCATTACGC
GGTCGGCCAGCCAACACGCACCGACAGCGAAACTGTCGCCGCTGGCTTTG
CTCTCAAATTCCAAGTCACCCGAGCATACCGCTCCAATCACCTCATTGGA
CTGGAATACAATTTCCCCCAGTCTGATCATTACCTCCAGTATCGATACCA
CCTGCACAATCTGGGATATTCCCACCCTTACCGCCAAGACACAGCTGATC
GCACATGACAAAGAGGTATACGATGTTCGATTCTGTGCGAATAGCGTGGA
CGTCTTTGTCAGCTGTGGTGCTGATGGTAGTGTGCGCATGTTCGATCTCC
GCAGCCTAGAACATAGCACTATCATCTACGAGCCCACCGAGAAGCATGAG
AAGGATGTCGAATCCTACGCAGCCTTTCGACTCTCGGCGGGCGACAAGCT
ACGGTCGACCTGAGGAGCTCCATATTCCATCTGCGGGCCCCAATCTGCAG
CGACAATCGATGTCTCACGAATACCCCGCTGGTCAAGACAACCCTGTCCC
TTCTATCAACGTTCATTCATTGGGGTCACAACCGGGTCAGTATGGTGGTG
GTGGAAGCAGCGGCGCGAGCGGAGTACTCCCGGGAGCGCTTCAGCCGGGC
AACGTCAACCGTCCACCTGCAGTATCAGTCAACACTGCACCTTCGGCGCT
ACCAACCCTACCAGAGCTGAATACCCCAATGCAGCCAACATCACAATCAG
GACAACAGCCACCGTCTGCGCAACAACAGCAAACGCCCCAACAGCAGCAG
CCGAATGCCCGCGCCAGTATGGTCAACTCTCATGGGCATTCTAGATCCAG
CCCAGCAGGGTTTGAGCAGCCAAAATACAGACAGCCAGGCTCCTCTCCAG
GCTCTGCATATCCTCCCCATACTCCCCAGGGTACAAAATACTCGCCGTTG
GGTCTAGCCGACATCCGACCGACAGGAGACCTTCTGGGTGACCCAATCAC
CAGCTCCGGAATGGCACCGTTCAACGGGGATAATCCGGTACCTACCAATA
GCAACTACATTGCTCCTTGGCCTATATATTCTATGGATTGGTGTAAATGG
CCTATTACGGGGAGCTCCAGCTCGTTCGGGGGCAAAATCGCCTTGGGAAG
CTACCTAGAGGACAACCACAACTACCATCGCCCCATGATTCCCACCTTCT
TGCCACTTTCTCGCAAGATTCCAACATTGTCCGGGTTCTAGATGTCCGGC
AGCCTGGACAGGCTCTTCTTGAACTGAAGGGCCACGGCTCCTCCATCAAC
TGCGTTGAGTGGTCGCCCAACCGCCGCGGAGTCCTGGCTTCTGGTGCGGA
CGACTGCTTCGTACTTCTGTGGGACCTCATCAACCAGCACAATGCGGCTC
CTGTGCCTCCCATGCCTCCCGTCCCGCACAATGCGGGCACGCCCGCGACA
CCCAGTGAGCGAGGTCCAGCCGCCGTGTGGCTCTGCGACAACGAAGTGTC
GAACATTAGCTGGTCGCCGCAGGGCGGTACCACGCCTGCCGGGCATCCGC
GCGACTGGCTCGGGGTCTGCGGTGGACGTGGACTATGGGGAGTGGCACTG
TAGTCCCCACTCCGGGCAATGGCAGTCCTTCTGGGCAAGCCCAGCCCGTA
TGGCCCCCGCCTCTACTACGCATCGCTGATACAAATTATAGATACTCATT
GGACACAACCAGACCCGGATACGCCGGACGCCGCTGCGGGGGAGATTAAA
CTCGACTATGTGAAGACCGCAGAGGCCACCCATTCGTATCCAGTAACACG
GATCCTCTGGGAGCCGCCATCATCTCAGAAACAGTCTACCGATCTGTTGG
CCACATCTGGTGATCATCTGCGATTATGGTCGCTGCCAACGGCGCAACCC
GTACCAAGTTCCAACTCCATTACGCGGTCGGCCAGCCAACACGCACCGAC
AGCGAAACTGTCGCCGCTGGCTTTGCTCTCAAATTCCAAGTCACCCGAGC
ATACCGCTCCAATCACCTCATTGGACTGGAATACAATTTCCCCCAGTCTG
ATCATTACCTCCAGTATCGATACCACCTGCACAATCTGGGATATTCCCAC
CCTTACCGCCAAGACACAGCTGATCGCACATGACAAAGAGGTATACGATG
TTCGATTCTGTGCGAATAGCGTGGACGTCTTTGTCAGCTGTGGTGCTGAT
GGTAGTGTGCGCATGTTCGATCTCCGCAGCCTAGAACATAGCACTATCAT
CTACGAGCCCACCGAGAAGCATGAGAAGGATGTCGAATCCTACGCAGCCT
TTCGACTCTCGGCGGGCGACAAGCTACGGTCGACCTGAGGAGCTCCATAT
TCCATCTGCGGGCCCCAATCTGCAGCGACAATCGATGTCTCACGAATACC
CCGCTGGTCAAGACAACCCTGTCCCTTCTATCAACGTTCATTCATTGGGG
TCACAACCGGGTCAGTATGGTGGTGGTGGAAGCAGCGGCGCGAGCGGAGT
ACTCCCGGGAGCGCTTCAGCCGGGCAACGTCAACCGTCCACCTGCAGTAT
CAGTCAACACTGCACCTTCGGCGCTACCAACCCTACCAGAGCTGAATACC
CCAATGCAGCCAACATCACAATCAGGACAACAGCCACCGTCTGCGCAACA
ACAGCAAACGCCCCAACAGCAGCAGCCGAATGCCCGCGCCAGTATGGTCA
ACTCTCATGGGCATTCTAGATCCAGCCCAGCAGGGTTTGAGCAGCCAAAA
TACAGACAGCCAGGCTCCTCTCCAGGCTCTGCATATCCTCCCCATACTCC
CCAGGGTACAAAATACTCGCCGTTGGGTCTAGCCGACATCCGACCGACAG
GAGACCTTCTGGGTGACCCAATCACCAGCTCCGGAATGGCACCGTTCAAC
GGGGATAATCCGGTACCTACCAATAGCAACTACATTGCTCCTTGGCCTAT
ATATTCTATGGATTGGTGTAAATGGCCTATTACGGGGAGCTCCAGCTCGT
TCGGGGGCAAAATCGCCTTGGGAAGCTACCTAGAGGACAACCACAACTAC
CATCGCCCCATGATTCCCACCTTCTTGCCACTTTCTCGCAAGATTCCAAC
ATTGTCCGGGTTCTAGATGTCCGGCAGCCTGGACAGGCTCTTCTTGAACT
GAAGGGCCACGGCTCCTCCATCAACTGCGTTGAGTGGTCGCCCAACCGCC
GCGGAGTCCTGGCTTCTGGTGCGGACGACTGCTTCGTACTTCTGTGGGAC
CTCATCAACCAGCACAATGCGGCTCCTGTGCCTCCCATGCCTCCCGTCCC
GCACAATGCGGGCACGCCCGCGACACCCAGTGAGCGAGGTCCAGCCGCCG
TGTGGCTCTGCGACAACGAAGTGTCGAACATTAGCTGGTCGCCGCAGGGC
GGTACCACGCCTGCCGGGCATCCGCGCGACTGGCTCGGGGTCTGCGGTGG
ACGTGGACTATGGGGAGTGGCACTGTAGTCCCCACTCCGGGCAATGGCAG
TCCTTCTGGGCAAGCCCAGCCCGTATGGCCCCCGCCTCTACTACGCATCG
CTGATACAAATTATAGATACTCATTGGACACAACCAGACCCGGATACGCC
GGACGCCGCTGCGGGGGAGATTAAACTCGACTATGTGAAGACCGCAGAGG
CCACCCATTCGTATCCAGTAACACGGATCCTCTGGGAGCCGCCATCATCT
CAGAAACAGTCTACCGATCTGTTGGCCACATCTGGTGATCATCTGCGATT
ATGGTCGCTGCCAACGGCGCAACCCGTACCAAGTTCCAACTCCATTACGC
GGTCGGCCAGCCAACACGCACCGACAGCGAAACTGTCGCCGCTGGCTTTG
CTCTCAAATTCCAAGTCACCCGAGCATACCGCTCCAATCACCTCATTGGA
CTGGAATACAATTTCCCCCAGTCTGATCATTACCTCCAGTATCGATACCA
CCTGCACAATCTGGGATATTCCCACCCTTACCGCCAAGACACAGCTGATC
GCACATGACAAAGAGGTATACGATGTTCGATTCTGTGCGAATAGCGTGGA
CGTCTTTGTCAGCTGTGGTGCTGATGGTAGTGTGCGCATGTTCGATCTCC
GCAGCCTAGAACATAGCACTATCATCTACGAGCCCACCGAGAAGCATGAG
AAGGATGTCGAATCCTACGCAGCCTTTCGACTCTCGGCGGGCGACAAGCT
ACGGTCGACCTGAGGAGCTCCATATTCCATCTGCGGGCCCCAATCTGCAG
CGACAATCGATGTCTCACGAATACCCCGCTGGTCAAGACAACCCTGTCCC
TTCTATCAACGTTCATTCATTGGGGTCACAACCGGGTCAGTATGGTGGTG
GTGGAAGCAGCGGCGCGAGCGGAGTACTCCCGGGAGCGCTTCAGCCGGGC
AACGTCAACCGTCCACCTGCAGTATCAGTCAACACTGCACCTTCGGCGCT
ACCAACCCTACCAGAGCTGAATACCCCAATGCAGCCAACATCACAATCAG
GACAACAGCCACCGTCTGCGCAACAACAGCAAACGCCCCAACAGCAGCAG
CCGAATGCCCGCGCCAGTATGGTCAACTCTCATGGGCATTCTAGATCCAG
CCCAGCAGGGTTTGAGCAGCCAAAATACAGACAGCCAGGCTCCTCTCCAG
GCTCTGCATATCCTCCCCATACTCCCCAGGGTACAAAATACTCGCCGTTG
GGTCTAGCCGACATCCGACCGACAGGAGACCTTCTGGGTGACCCAATCAC
CAGCTCCGGAATGGCACCGTTCAACGGGGATAATCCGGTACCTACCAATA
GCAACTACATTGCTCCTTGGCCTATATATTCTATGGATTGGTGTAAATGG
CCTATTACGGGGAGCTCCAGCTCGTTCGGGGGCAAAATCGCCTTGGGAAG
CTACCTAGAGGACAACCACAACTACCATCGCCCCATGATTCCCACCTTCT
TGCCACTTTCTCGCAAGATTCCAACATTGTCCGGGTTCTAGATGTCCGGC
AGCCTGGACAGGCTCTTCTTGAACTGAAGGGCCACGGCTCCTCCATCAAC
TGCGTTGAGTGGTCGCCCAACCGCCGCGGAGTCCTGGCTTCTGGTGCGGA
CGACTGCTTCGTACTTCTGTGGGACCTCATCAACCAGCACAATGCGGCTC
CTGTGCCTCCCATGCCTCCCGTCCCGCACAATGCGGGCACGCCCGCGACA
CCCAGTGAGCGAGGTCCAGCCGCCGTGTGGCTCTGCGACAACGAAGTGTC
GAACATTAGCTGGTCGCCGCAGGGCGGTACCACGCCTGCCGGGCATCCGC
GCGACTGGCTCGGGGTCTGCGGTGGACGTGGACTATGGGGAGTGGCACTG
TAGTCCCCACTCCGGGCAATGGCAGTCCTTCTGGGCAAGCCCAGCCCGTA
TGGCCCCCGCCTCTACTACGCATCGCTGATACAAATTATAGATACTCATT
GGACACAACCAGACCCGGATACGCCGGACGCCGCTGCGGGGGAGATTAAA
CTCGACTATGTGAAGACCGCAGAGGCCACCCATTCGTATCCAGTAACACG
GATCCTCTGGGAGCCGCCATCATCTCAGAAACAGTCTACCGATCTGTTGG
CCACATCTGGTGATCATCTGCGATTATGGTCGCTGCCAACGGCGCAACCC
GTACCAAGTTCCAACTCCATTACGCGGTCGGCCAGCCAACACGCACCGAC
AGCGAAACTGTCGCCGCTGGCTTTGCTCTCAAATTCCAAGTCACCCGAGC
ATACCGCTCCAATCACCTCATTGGACTGGAATACAATTTCCCCCAGTCTG
ATCATTACCTCCAGTATCGATACCACCTGCACAATCTGGGATATTCCCAC
CCTTACCGCCAAGACACAGCTGATCGCACATGACAAAGAGGTATACGATG
TTCGATTCTGTGCGAATAGCGTGGACGTCTTTGTCAGCTGTGGTGCTGAT
GGTAGTGTGCGCATGTTCGATCTCCGCAGCCTAGAACATAGCACTATCAT
CTACGAGCCCACCGAGAAGCATGAGAAGGATGTCGAATCCTACGCAGCCT
TTCGACTCTCGGCGGGCGACAAGCTACGGTCGACCTGAGGAGCTCCATAT
TCCATCTGCGGGCCCCAATCTGCAGCGACAATCGATGTCTCACGAATACC
CCGCTGGTCAAGACAACCCTGTCCCTTCTATCAACGTTCATTCATTGGGG
TCACAACCGGGTCAGTATGGTGGTGGTGGAAGCAGCGGCGCGAGCGGAGT
ACTCCCGGGAGCGCTTCAGCCGGGCAACGTCAACCGTCCACCTGCAGTAT
CAGTCAACACTGCACCTTCGGCGCTACCAACCCTACCAGAGCTGAATACC
CCAATGCAGCCAACATCACAATCAGGACAACAGCCACCGTCTGCGCAACA
ACAGCAAACGCCCCAACAGCAGCAGCCGAATGCCCGCGCCAGTATGGTCA
ACTCTCATGGGCATTCTAGATCCAGCCCAGCAGGGTTTGAGCAGCCAAAA
TACAGACAGCCAGGCTCCTCTCCAGGCTCTGCATATCCTCCCCATACTCC
CCAGGGTACAAAATACTCGCCGTTGGGTCTAGCCGACATCCGACCGACAG
GAGACCTTCTGGGTGACCCAATCACCAGCTCCGGAATGGCACCGTTCAAC
GGGGATAATCCGGTACCTACCAATAGCAACTACATTGCTCCTTGGCCTAT
ATATTCTATGGATTGGTGTAAATGGCCTATTACGGGGAGCTCCAGCTCGT
TCGGGGGCAAAATCGCCTTGGGAAGCTACCTAGAGGACAACCACAACTAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262J7K |
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | PFAM:PF00400 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:836119..838179 - |
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