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CBS51388_003238-T1, CBS51388_003238-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_003238-T1
Unique NameCBS51388_003238-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An04:843928..846576-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_003238-T1 ID=CBS51388_003238-T1|Name=CBS51388_003238-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2649bp|location=Sequence derived from alignment at An04:843928..846576- (Aspergillus niger CBS 513.88)
ATGATGTCCAGAAGCCAGTCGAGCTTGGGCTTCATGGACGCGGGGAGGGA
TGATCCCTCTGCGCCAGGCGCTCAACCTGGACATCAAGCGCCACCGTCCA
ACTCGGGTCCCATCAATCTGTCAGGTCTGGTGTGCAATGTGCGCCGAACA
ACTGGCAGGGAACCGCATCCGTTGGTCGGGGCAACCACGACTATCCTGGG
CGATAAGCTCTACGTGTTCGGTGGTCGTGTTCTGTCTAAAAGTCGCCCGC
AATTGACGTCGGACATATACGAGCTGGACTTGATCCGGCGTCACTGGACG
AAGATCGAGACCACCGGCGATATCCCCCGCCCGCGGTACTTTCACAGTGT
CTGCGCTCTGGGTGATCACAAGTTGGTGTGCTATGGCGGCATGTCGCCCG
CACTGAACGTATCAAAGGAGCCGGCCAGTAATGGCTCAGGTGGACAGGAA
GCACAGCCAGAAGTGGTGGTCATGTCTGATATCCATATCTTCGATGTACC
ATCTCGGACGTGGACCCGTGTGCCTGCCACAGACTCGCCACAGGGACGCT
ATGCGCACTGCGCGACCATTTTGCCTTCGAGCGCCCATTTCACCTCCGCC
ACTGCTCCACTCTCTGCAATCCATCACAATCCCGCCTCGTCAAATCCGCA
CCAGGGATCGATTGGGGTGGATATCGACGGGTTTGGAGGAGCGGAGATGG
TGGTCGTAGGAGGGCAAGATAGCTCAAACCACTACATCGAACAGATTAGT
GTGTTTAACCTACGGAGCCTCAAGTGGACCAGTACCACTCACCTGGGGCG
AAGCTGCGGTGCCTACCGAAGTGTGGTCGCTCCCTTGGTAGGCATGAATG
TTTCCGACATTGGGTCTGCCGCAGACGATGGGGAGGCACAGGAGCCGTTG
GAAGAGTCGCAGGTCGAGGGGTGTCCGATGTTGGTCTATTCTAATTACAA
CTTCCTGGATGTGAAGCTGGAGCTCCAGGTGCGCCTCCCAGATGGCCGCC
TGATCGAGAAGCCCATGCAGAGCCAGGCGTCGCCTCCTGGCTTGAGGTTC
CCCAACGGAGGAGTCATCAACGGTCATTTTGTCGTGAGCGGAACCTACCT
GACCTCGTCGAAGCAAGAATATGCGCTTTGGGCCCTCGACCTGAGAACCC
TTACCTGGGGTCGGATCGATGCCGGCGGGTCTGTGTTCGGCCATGGCAGC
TGGAACCGTGGAATTTTGTGGCCAAGAAGAAACACTTTTGTCATTCTGGG
CCACCGGAAGCGCAGCTTGGTTGAGGACTACAACCATCGTCGCATCAACT
TCTCCCACGTATGTATGGTCGAGTTGGAAGCGTTTGGGCTCTACAACAAC
GCGTGCCGGACCACGCCCACATCGGGATACATCTCGTACAGTTCTCCGGC
AGTCCCTGCATCCATGCAGCACAAATTGACCAAGTTGACCTCCGGCGGAA
GGCCGTTCACCTCCGCGTCTGACGAGCTAGGCAGACTTGCCCAGTCTCTG
CCTGAAATGGCCGATATGGAGCTGCAGGCAGTCGGAGGTGAGCGCATCCC
GGTGAACTCACGCATCCTGACTCGCAGATGGGGTCCTTATTTCATCCAGC
TTCTACGCGAGTCTTGTGATAGCGGGATCGCCGAGACTGCCACACTACGT
CCAGCAGTTGCCATGTATCCCAGTCGCAACTCGAGCATCACCATCACCCC
GTCACTGGGGCAAAACAGCACGTATTCCAATTCCAGCACTCTTGTCAGCA
ACCGCTCAGTCACCTCAAAGTCCTTGTTAGCGAACCTTGAGATACCCTCT
GCGCATAGCCTTTCCCCTACCTCTCGTCCTCGTGTGCTTTACCTCCCCCA
TACCGTCATCACTCTTCAAGTTCTTGTCTACTATTTCTACACCTCGTCTC
TTCCCCCCGCCGGCTCACCCCTCTGCACCCCACAAATCCTTTGCTCCCTT
CTCCAACTCGCCCGTCCCTACCAAGTCGACGGCCTCCTCGAAGCCACCGT
CGAACGCCTCCACCAAGTTCTCGACGGAAGAAACGCCGCTGCCGTCTTCA
ACGCTGCCGCAATGGCCGCCGGCGGTGGCCGAGGCACCGGCTTCACAAGT
GGCCCCGGCGGCACCCTGGAGGCGCTGAACGGCGCCCACGCCGGCCACGA
ATCCTCCTCCGGTACCGGAACCACCACCTCCCAGAGCCACCTCACCTCCG
ATTCCTCCGACACCGAACACGGCACCTCCGCCCTCTCTGTTGCCAGCAGC
GCCAGCGGCGTCATGGGCTCGCGCGGCATCCCCCTCCGCATCAACACCAA
CATCTTCAGCCGCCGGCACCGCAGCAACGCCGGCGTAGACCGGGACCGCG
AGGACTCCATGAGCAATGCCAGCATTTCCACCTCAGCCTCCACCAACACC
AGCTTCGACCACTCCGACTCCGAAATGGGCGGCGACCCGACCCGTCCGTC
CCACCACCGCCGCAACACCGACGCAGAACTCCGTCCCGAACGCGAGATCT
GGACCGGAGACCTCAGCAGCGTCATCGGTCTTCAGAAGCGCGGTCTCCGC
GGTCTCATGGAAGGTCGGAGGCTCCGGGAACGCAACAATAAACCTGCTGG
CGCAGCCGATCATGTTGCTACTGCTGTTGCTCCACCGCCTGGCGCGTAG
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Coding sequence (CDS) from alignment at An04:843928..846576-

>CBS51388_003238-T1 ID=CBS51388_003238-T1|Name=CBS51388_003238-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2649bp|location=Sequence derived from alignment at An04:843928..846576- (Aspergillus niger CBS 513.88)
ATGATGTCCAGAAGCCAGTCGAGCTTGGGCTTCATGGACGCGGGGAGGGA
TGATCCCTCTGCGCCAGGCGCTCAACCTGGACATCAAGCGCCACCGTCCA
ACTCGGGTCCCATCAATCTGTCAGGTCTGGTGTGCAATGTGCGCCGAACA
ACTGGCAGGGAACCGCATCCGTTGGTCGGGGCAACCACGACTATCCTGGG
CGATAAGCTCTACGTGTTCGGTGGTCGTGTTCTGTCTAAAAGTCGCCCGC
AATTGACGTCGGACATATACGAGCTGGACTTGATCCGGCGTCACTGGACG
AAGATCGAGACCACCGGCGATATCCCCCGCCCGCGGTACTTTCACAGTGT
CTGCGCTCTGGGTGATCACAAGTTGGTGTGCTATGGCGGCATGTCGCCCG
CACTGAACGTATCAAAGGAGCCGGCCAGTAATGGCTCAGGTGGACAGGAA
GCACAGCCAGAAGTGGTGGTCATGTCTGATATCCATATCTTCGATGTACC
ATCTCGGACGTGGACCCGTGTGCCTGCCACAGACTCGCCACAGGGACGCT
ATGCGCACTGCGCGACCATTTTGCCTTCGAGCGCCCATTTCACCTCCGCC
ACTGCTCCACTCTCTGCAATCCATCACAATCCCGCCTCGTCAAATCCGCA
CCAGGGATCGATTGGGGTGGATATCGACGGGTTTGGAGGAGCGGAGATGG
TGGTCGTAGGAGGGCAAGATAGCTCAAACCACTACATCGAACAGATTAGT
GTGTTTAACCTACGGAGCCTCAAGTGGACCAGTACCACTCACCTGGGGCG
AAGCTGCGGTGCCTACCGAAGTGTGGTCGCTCCCTTGGTAGGCATGAATG
TTTCCGACATTGGGTCTGCCGCAGACGATGGGGAGGCACAGGAGCCGTTG
GAAGAGTCGCAGGTCGAGGGGTGTCCGATGTTGGTCTATTCTAATTACAA
CTTCCTGGATGTGAAGCTGGAGCTCCAGGTGCGCCTCCCAGATGGCCGCC
TGATCGAGAAGCCCATGCAGAGCCAGGCGTCGCCTCCTGGCTTGAGGTTC
CCCAACGGAGGAGTCATCAACGGTCATTTTGTCGTGAGCGGAACCTACCT
GACCTCGTCGAAGCAAGAATATGCGCTTTGGGCCCTCGACCTGAGAACCC
TTACCTGGGGTCGGATCGATGCCGGCGGGTCTGTGTTCGGCCATGGCAGC
TGGAACCGTGGAATTTTGTGGCCAAGAAGAAACACTTTTGTCATTCTGGG
CCACCGGAAGCGCAGCTTGGTTGAGGACTACAACCATCGTCGCATCAACT
TCTCCCACGTATGTATGGTCGAGTTGGAAGCGTTTGGGCTCTACAACAAC
GCGTGCCGGACCACGCCCACATCGGGATACATCTCGTACAGTTCTCCGGC
AGTCCCTGCATCCATGCAGCACAAATTGACCAAGTTGACCTCCGGCGGAA
GGCCGTTCACCTCCGCGTCTGACGAGCTAGGCAGACTTGCCCAGTCTCTG
CCTGAAATGGCCGATATGGAGCTGCAGGCAGTCGGAGGTGAGCGCATCCC
GGTGAACTCACGCATCCTGACTCGCAGATGGGGTCCTTATTTCATCCAGC
TTCTACGCGAGTCTTGTGATAGCGGGATCGCCGAGACTGCCACACTACGT
CCAGCAGTTGCCATGTATCCCAGTCGCAACTCGAGCATCACCATCACCCC
GTCACTGGGGCAAAACAGCACGTATTCCAATTCCAGCACTCTTGTCAGCA
ACCGCTCAGTCACCTCAAAGTCCTTGTTAGCGAACCTTGAGATACCCTCT
GCGCATAGCCTTTCCCCTACCTCTCGTCCTCGTGTGCTTTACCTCCCCCA
TACCGTCATCACTCTTCAAGTTCTTGTCTACTATTTCTACACCTCGTCTC
TTCCCCCCGCCGGCTCACCCCTCTGCACCCCACAAATCCTTTGCTCCCTT
CTCCAACTCGCCCGTCCCTACCAAGTCGACGGCCTCCTCGAAGCCACCGT
CGAACGCCTCCACCAAGTTCTCGACGGAAGAAACGCCGCTGCCGTCTTCA
ACGCTGCCGCAATGGCCGCCGGCGGTGGCCGAGGCACCGGCTTCACAAGT
GGCCCCGGCGGCACCCTGGAGGCGCTGAACGGCGCCCACGCCGGCCACGA
ATCCTCCTCCGGTACCGGAACCACCACCTCCCAGAGCCACCTCACCTCCG
ATTCCTCCGACACCGAACACGGCACCTCCGCCCTCTCTGTTGCCAGCAGC
GCCAGCGGCGTCATGGGCTCGCGCGGCATCCCCCTCCGCATCAACACCAA
CATCTTCAGCCGCCGGCACCGCAGCAACGCCGGCGTAGACCGGGACCGCG
AGGACTCCATGAGCAATGCCAGCATTTCCACCTCAGCCTCCACCAACACC
AGCTTCGACCACTCCGACTCCGAAATGGGCGGCGACCCGACCCGTCCGTC
CCACCACCGCCGCAACACCGACGCAGAACTCCGTCCCGAACGCGAGATCT
GGACCGGAGACCTCAGCAGCGTCATCGGTCTTCAGAAGCGCGGTCTCCGC
GGTCTCATGGAAGGTCGGAGGCTCCGGGAACGCAACAATAAACCTGCTGG
CGCAGCCGATCATGTTGCTACTGCTGTTGCTCCACCGCCTGGCGCGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_003238CBS51388_003238Aspergillus niger CBS 513.88gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003238-T1.cdsCBS51388_003238-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003238-T1.exon1CBS51388_003238-T1.exon1Aspergillus niger CBS 513.88exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003238-T1CBS51388_003238-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR015915
DBxrefPFAM:PF13854
DBxrefPFAM:PF13418
DBxrefPFAM:PF13415
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An04supercontigAn04:843928..846576 -
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