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CBS51388_003240-T1, CBS51388_003240-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_003240-T1
Unique NameCBS51388_003240-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An04:852220..853674+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_003240-T1 ID=CBS51388_003240-T1|Name=CBS51388_003240-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1455bp|location=Sequence derived from alignment at An04:852220..853674+ (Aspergillus niger CBS 513.88)
ATGGCACCCCAAAGGAAACGCAAGTCGGAGAGCGCGTCAATCGCCGAGGA
AACCGAGTCACCTGCTGCGAAGAGAGTGGTAAGCCTTTCCTATCTACAAA
TTCGCCAATACTACCCGCGAGGTAGCGCCTATCAAACCAGTCGGCCCGTC
CAATACGCGATCGCCGCCCACTGGCTAATCACGGTGTCATTCACGTCTCT
TCTCCAATGATAGGAAGCATCGATGTTACATCCAATGCACGAACAAACGA
TTATGTTCTCCCAGTTTTACGTTCAAGCAATACTAATCATTTCTTATTTA
CATAGGCCGCGCCCGACACACCGGCTACCGGAGAAAAGAGAAAGAGGGGT
CGTCCCAGGAAATATCCTGAGGGTAGTACTCCCAAGCGCCCTGACGGCCC
CAAAAGAGGCCGTGGCCGTCCTCGTAAAGATCCGAATGCTCGTCAGTTCC
CTCTTCGTCCCATAATTATCTCTGATGCTCTTACGGACAACGCCCACACG
ATTTCTTTTGTCATTCCAGCCTCCTATCAACGATGTGTTCGGTATGATAT
TATCTACAGCATTTGCTGACATACACCAGCTACTCCCGCAAAATCTACAA
CCCCCAAGCAGGGCAAACGGGGCAGGCCAAGGAAGAACCCGATCGAGAAT
GGAACCGAACCTACCTCATCAACAACGAAACCAGAGACGATCGATACCAC
ATCCTTCGAAGGACGCTCATACTGGTTGATGAAGGCTGAACCGGAATCGC
GATTAGAGAAAGGTGTTGATGTAAAATTCTCCATTGATGACTTGGCTTCT
CGCAAGGAGCCGGAGCCATGGGACGGTACGTTTCCATAATAGGGCCTTGA
ATGATTGACATGTCTGCTGATCACCCAGTAGGTGTGCGTAACCCTGTTGG
TAAGTGAGACCATTGGCGGTGGCAAGCTAGCCTTCTGGCTTACAAGCGAC
ATAGCACAAAAACATATCCGTGACATGAAGAAGGGTGATCTCGCCTTCTT
CTACCACTCCAACTGCAAAGTACCAGGCATTGCGGGTATCATGGAGATTG
TCCAGGAGCATTCACCAGATGGTTAGTCCTAACACGAGCCCTTTCTGGAA
AGGACAAGGTCAGCTAATACGGCGAGCATGTTTAGAGTCAGCCTTCGACC
CCGCCCACCCATACTACGACGAAAAGTCGAACCGAGACGATCCCAAGTGG
CAGGTTGTGCACGTAGAGTTCCGGCGCAAGTTCAACAAAATGATTACGCT
GAACGATCTCAAATCATATGCACAGTCCGAGCGGGCTCTTGAAAATATGC
AGGTGCTGAAGCAGTCCCGGCTGAGTGTGACGCCAGTAAGCGTCACAGAA
TGGGCGTTTATCATGCGGGTAGCGGACGAAAACGAGGCCAAGGCAAATGC
CGAAGCTTCCAAGGATGACAGTGCCGAGGGCGACGAGCCCGAATCAAGCG
AGTAA
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Coding sequence (CDS) from alignment at An04:852220..853674+

>CBS51388_003240-T1 ID=CBS51388_003240-T1|Name=CBS51388_003240-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5490bp|location=Sequence derived from alignment at An04:852220..853674+ (Aspergillus niger CBS 513.88)
ATGGCACCCCAAAGGAAACGCAAGTCGGAGAGCGCGTCAATCGCCGAGGA
AACCGAGTCACCTGCTGCGAAGAGAGTGGCCGCGCCCGACACACCGGCTA
CCGGAGAAAAGAGAAAGAGGGGTCGTCCCAGGAAATATCCTGAGGGTAGT
ACTCCCAAGCGCCCTGACGGCCCCAAAAGAGGCCGTGGCCGTCCTCGTAA
AGATCCGAATGCTCCTACTCCCGCAAAATCTACAACCCCCAAGCAGGGCA
AACGGGGCAGGCCAAGGAAGAACCCGATCGAGAATGGAACCGAACCTACC
TCATCAACAACGAAACCAGAGACGATCGATACCACATCCTTCGAAGGACG
CTCATACTGGTTGATGAAGGCTGAACCGGAATCGCGATTAGAGAAAGGTG
TTGATGTAAAATTCTCCATTGATGACTTGGCTTCTCGCAAGGAGCCGGAG
CCATGGGACGGTGTGCGTAACCCTGTTGCACAAAAACATATCCGTGACAT
GAAGAAGGGTGATCTCGCCTTCTTCTACCACTCCAACTGCAAAGTACCAG
GCATTGCGGGTATCATGGAGATTGTCCAGGAGCATTCACCAGATGAGTCA
GCCTTCGACCCCGCCCACCCATACTACGACGAAAAGTCGAACCGAGACGA
TCCCAAGTGGCAGGTTGTGCACGTAGAGTTCCGGCGCAAGTTCAACAAAA
TGATTACGCTGAACGATCTCAAATCATATGCACAGTCCGAGCGGGCTCTT
GAAAATATGCAGGTGCTGAAGCAGTCCCGGCTGAGTGTGACGCCAGTAAG
CGTCACAGAATGGGCGTTTATCATGCGGGTAGCGGACGAAAACGAGGCCA
AGGCAAATGCCGAAGCTTCCAAGGATGACAGTGCCGAGGGCGACGAGCCC
GAATCAAGCGAGTAAATGGCACCCCAAAGGAAACGCAAGTCGGAGAGCGC
GTCAATCGCCGAGGAAACCGAGTCACCTGCTGCGAAGAGAGTGGCCGCGC
CCGACACACCGGCTACCGGAGAAAAGAGAAAGAGGGGTCGTCCCAGGAAA
TATCCTGAGGGTAGTACTCCCAAGCGCCCTGACGGCCCCAAAAGAGGCCG
TGGCCGTCCTCGTAAAGATCCGAATGCTCCTACTCCCGCAAAATCTACAA
CCCCCAAGCAGGGCAAACGGGGCAGGCCAAGGAAGAACCCGATCGAGAAT
GGAACCGAACCTACCTCATCAACAACGAAACCAGAGACGATCGATACCAC
ATCCTTCGAAGGACGCTCATACTGGTTGATGAAGGCTGAACCGGAATCGC
GATTAGAGAAAGGTGTTGATGTAAAATTCTCCATTGATGACTTGGCTTCT
CGCAAGGAGCCGGAGCCATGGGACGGTGTGCGTAACCCTGTTGCACAAAA
ACATATCCGTGACATGAAGAAGGGTGATCTCGCCTTCTTCTACCACTCCA
ACTGCAAAGTACCAGGCATTGCGGGTATCATGGAGATTGTCCAGGAGCAT
TCACCAGATGAGTCAGCCTTCGACCCCGCCCACCCATACTACGACGAAAA
GTCGAACCGAGACGATCCCAAGTGGCAGGTTGTGCACGTAGAGTTCCGGC
GCAAGTTCAACAAAATGATTACGCTGAACGATCTCAAATCATATGCACAG
TCCGAGCGGGCTCTTGAAAATATGCAGGTGCTGAAGCAGTCCCGGCTGAG
TGTGACGCCAGTAAGCGTCACAGAATGGGCGTTTATCATGCGGGTAGCGG
ACGAAAACGAGGCCAAGGCAAATGCCGAAGCTTCCAAGGATGACAGTGCC
GAGGGCGACGAGCCCGAATCAAGCGAGTAAATGGCACCCCAAAGGAAACG
CAAGTCGGAGAGCGCGTCAATCGCCGAGGAAACCGAGTCACCTGCTGCGA
AGAGAGTGGCCGCGCCCGACACACCGGCTACCGGAGAAAAGAGAAAGAGG
GGTCGTCCCAGGAAATATCCTGAGGGTAGTACTCCCAAGCGCCCTGACGG
CCCCAAAAGAGGCCGTGGCCGTCCTCGTAAAGATCCGAATGCTCCTACTC
CCGCAAAATCTACAACCCCCAAGCAGGGCAAACGGGGCAGGCCAAGGAAG
AACCCGATCGAGAATGGAACCGAACCTACCTCATCAACAACGAAACCAGA
GACGATCGATACCACATCCTTCGAAGGACGCTCATACTGGTTGATGAAGG
CTGAACCGGAATCGCGATTAGAGAAAGGTGTTGATGTAAAATTCTCCATT
GATGACTTGGCTTCTCGCAAGGAGCCGGAGCCATGGGACGGTGTGCGTAA
CCCTGTTGCACAAAAACATATCCGTGACATGAAGAAGGGTGATCTCGCCT
TCTTCTACCACTCCAACTGCAAAGTACCAGGCATTGCGGGTATCATGGAG
ATTGTCCAGGAGCATTCACCAGATGAGTCAGCCTTCGACCCCGCCCACCC
ATACTACGACGAAAAGTCGAACCGAGACGATCCCAAGTGGCAGGTTGTGC
ACGTAGAGTTCCGGCGCAAGTTCAACAAAATGATTACGCTGAACGATCTC
AAATCATATGCACAGTCCGAGCGGGCTCTTGAAAATATGCAGGTGCTGAA
GCAGTCCCGGCTGAGTGTGACGCCAGTAAGCGTCACAGAATGGGCGTTTA
TCATGCGGGTAGCGGACGAAAACGAGGCCAAGGCAAATGCCGAAGCTTCC
AAGGATGACAGTGCCGAGGGCGACGAGCCCGAATCAAGCGAGTAAATGGC
ACCCCAAAGGAAACGCAAGTCGGAGAGCGCGTCAATCGCCGAGGAAACCG
AGTCACCTGCTGCGAAGAGAGTGGCCGCGCCCGACACACCGGCTACCGGA
GAAAAGAGAAAGAGGGGTCGTCCCAGGAAATATCCTGAGGGTAGTACTCC
CAAGCGCCCTGACGGCCCCAAAAGAGGCCGTGGCCGTCCTCGTAAAGATC
CGAATGCTCCTACTCCCGCAAAATCTACAACCCCCAAGCAGGGCAAACGG
GGCAGGCCAAGGAAGAACCCGATCGAGAATGGAACCGAACCTACCTCATC
AACAACGAAACCAGAGACGATCGATACCACATCCTTCGAAGGACGCTCAT
ACTGGTTGATGAAGGCTGAACCGGAATCGCGATTAGAGAAAGGTGTTGAT
GTAAAATTCTCCATTGATGACTTGGCTTCTCGCAAGGAGCCGGAGCCATG
GGACGGTGTGCGTAACCCTGTTGCACAAAAACATATCCGTGACATGAAGA
AGGGTGATCTCGCCTTCTTCTACCACTCCAACTGCAAAGTACCAGGCATT
GCGGGTATCATGGAGATTGTCCAGGAGCATTCACCAGATGAGTCAGCCTT
CGACCCCGCCCACCCATACTACGACGAAAAGTCGAACCGAGACGATCCCA
AGTGGCAGGTTGTGCACGTAGAGTTCCGGCGCAAGTTCAACAAAATGATT
ACGCTGAACGATCTCAAATCATATGCACAGTCCGAGCGGGCTCTTGAAAA
TATGCAGGTGCTGAAGCAGTCCCGGCTGAGTGTGACGCCAGTAAGCGTCA
CAGAATGGGCGTTTATCATGCGGGTAGCGGACGAAAACGAGGCCAAGGCA
AATGCCGAAGCTTCCAAGGATGACAGTGCCGAGGGCGACGAGCCCGAATC
AAGCGAGTAAATGGCACCCCAAAGGAAACGCAAGTCGGAGAGCGCGTCAA
TCGCCGAGGAAACCGAGTCACCTGCTGCGAAGAGAGTGGCCGCGCCCGAC
ACACCGGCTACCGGAGAAAAGAGAAAGAGGGGTCGTCCCAGGAAATATCC
TGAGGGTAGTACTCCCAAGCGCCCTGACGGCCCCAAAAGAGGCCGTGGCC
GTCCTCGTAAAGATCCGAATGCTCCTACTCCCGCAAAATCTACAACCCCC
AAGCAGGGCAAACGGGGCAGGCCAAGGAAGAACCCGATCGAGAATGGAAC
CGAACCTACCTCATCAACAACGAAACCAGAGACGATCGATACCACATCCT
TCGAAGGACGCTCATACTGGTTGATGAAGGCTGAACCGGAATCGCGATTA
GAGAAAGGTGTTGATGTAAAATTCTCCATTGATGACTTGGCTTCTCGCAA
GGAGCCGGAGCCATGGGACGGTGTGCGTAACCCTGTTGCACAAAAACATA
TCCGTGACATGAAGAAGGGTGATCTCGCCTTCTTCTACCACTCCAACTGC
AAAGTACCAGGCATTGCGGGTATCATGGAGATTGTCCAGGAGCATTCACC
AGATGAGTCAGCCTTCGACCCCGCCCACCCATACTACGACGAAAAGTCGA
ACCGAGACGATCCCAAGTGGCAGGTTGTGCACGTAGAGTTCCGGCGCAAG
TTCAACAAAATGATTACGCTGAACGATCTCAAATCATATGCACAGTCCGA
GCGGGCTCTTGAAAATATGCAGGTGCTGAAGCAGTCCCGGCTGAGTGTGA
CGCCAGTAAGCGTCACAGAATGGGCGTTTATCATGCGGGTAGCGGACGAA
AACGAGGCCAAGGCAAATGCCGAAGCTTCCAAGGATGACAGTGCCGAGGG
CGACGAGCCCGAATCAAGCGAGTAAATGGCACCCCAAAGGAAACGCAAGT
CGGAGAGCGCGTCAATCGCCGAGGAAACCGAGTCACCTGCTGCGAAGAGA
GTGGCCGCGCCCGACACACCGGCTACCGGAGAAAAGAGAAAGAGGGGTCG
TCCCAGGAAATATCCTGAGGGTAGTACTCCCAAGCGCCCTGACGGCCCCA
AAAGAGGCCGTGGCCGTCCTCGTAAAGATCCGAATGCTCCTACTCCCGCA
AAATCTACAACCCCCAAGCAGGGCAAACGGGGCAGGCCAAGGAAGAACCC
GATCGAGAATGGAACCGAACCTACCTCATCAACAACGAAACCAGAGACGA
TCGATACCACATCCTTCGAAGGACGCTCATACTGGTTGATGAAGGCTGAA
CCGGAATCGCGATTAGAGAAAGGTGTTGATGTAAAATTCTCCATTGATGA
CTTGGCTTCTCGCAAGGAGCCGGAGCCATGGGACGGTGTGCGTAACCCTG
TTGCACAAAAACATATCCGTGACATGAAGAAGGGTGATCTCGCCTTCTTC
TACCACTCCAACTGCAAAGTACCAGGCATTGCGGGTATCATGGAGATTGT
CCAGGAGCATTCACCAGATGAGTCAGCCTTCGACCCCGCCCACCCATACT
ACGACGAAAAGTCGAACCGAGACGATCCCAAGTGGCAGGTTGTGCACGTA
GAGTTCCGGCGCAAGTTCAACAAAATGATTACGCTGAACGATCTCAAATC
ATATGCACAGTCCGAGCGGGCTCTTGAAAATATGCAGGTGCTGAAGCAGT
CCCGGCTGAGTGTGACGCCAGTAAGCGTCACAGAATGGGCGTTTATCATG
CGGGTAGCGGACGAAAACGAGGCCAAGGCAAATGCCGAAGCTTCCAAGGA
TGACAGTGCCGAGGGCGACGAGCCCGAATCAAGCGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000785chromatin
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_003240CBS51388_003240Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003240-T1CBS51388_003240-T1-proteinAspergillus niger CBS 513.88polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003240-T1.exon1CBS51388_003240-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_003240-T1.exon2CBS51388_003240-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_003240-T1.exon3CBS51388_003240-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_003240-T1.exon4CBS51388_003240-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_003240-T1.exon5CBS51388_003240-T1.exon5Aspergillus niger CBS 513.88exon
CBS51388_003240-T1.exon6CBS51388_003240-T1.exon6Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003240-T1.cdsCBS51388_003240-T1.cdsAspergillus niger CBS 513.88CDS


Properties
Property NameValue
DBxrefInterPro:IPR015947
DBxrefInterPro:IPR002740
DBxrefInterPro:IPR000116
DBxrefInterPro:IPR017956
DBxrefPFAM:PF01878
DBxrefPFAM:PF02178
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An04supercontigAn04:852220..853674 +
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