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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:937142..938267- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003265-T1 ID=CBS51388_003265-T1|Name=CBS51388_003265-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1126bp|location=Sequence derived from alignment at An04:937142..938267- (Aspergillus niger CBS 513.88)
ATGGATCGTTCCAACAAGCCTGCCGCCATCGGCGTCGGTGCCTCTCTTCC
CCAACCCACCATCTCCCTCCGCGACAACACCGTTGAAGCTACCCTCCCCA
CCGGCGAGTCCGTCACTGTCCACCTCTACGGAGCCACCGTCACCTCCTGG
AAGCTCGCCAATGGCAAGGAACAGCTCTTCGTGAGCGAGAAGGCTCATCT
AGATGGCTCCAAGCCTATCCGGGGTGGTATTCCCGTCGTATTCCCGGTAT
GTCCCCTTCAAGCCAATGACTACTGAACCGCCAGCTTGCTTTCTACACCT
CGCTCCAAGCATCCCACTGAAAGGCAAACAAACTAACTCCTATCTCCATC
AAATCAGGTCTTCGGTCCTCCTCCCTCCAATCACGCCACCTCTGCACTCC
CTCAACACGGCTTTGCCCGGAACTCGAACTGGGAATTCCTCGGCAAATCC
TCGTCCGAAGCGTTCGGCCGCGACCGGAAAGAAGGCGAAGACGCTGTGAA
GTTGGACTTCGGATTGTCGCATCCTATGCTGAGCGAGGAATTCCAGAAGG
CCTGGCCGTATCAGTTTGGATTGGTGTATAGCGTAACTTTGACAAAGGGG
AGCCTGGAGACTTCTCTGCAGGTGCAGAACCAGGGCGAGCAGAATTTCGA
TTTCCAGGTGTTGATGCACACGTATTTGAGTGTTGAGGTATGTCACAACC
CAACTTCCGGGCTGTGGTTAGGCTAATGAGGCATGGCAGGACATCTCCAA
CATCCGCGTCAAGAACCTCCAGCAAAAGGAATACTTGGACAAGACACAGG
GCGGTGCAGCTATCACGGAGACTTCGGAGGCAGTGGAGATCAACAAGGAA
ACGGACCGTGTGTACAAGGCATTGGATCCGAAGGTGCCGATTATCGTGTC
CACGGCGTCGGATGATCAGCCTCTGTTCTCGATCACAAGGGAGGCCTTGA
CGGATGTGGTGGTGTGGAACCCCTGGATCGAGAAGGCCAAGGGTATGGCG
GACTTTGGTCCCGATGAGGCATACAAGAACATGCTTTGTGTCGAGGCCGG
TTCTGTTGCTGGATGGCAGACCCTGGAGGCAGGCGAATCTTGGGAAGGTG
GACAGACTATCCGGCCCCGGCTGTAG back to topCoding sequence (CDS) from alignment at An04:937142..938267- >CBS51388_003265-T1 ID=CBS51388_003265-T1|Name=CBS51388_003265-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2889bp|location=Sequence derived from alignment at An04:937142..938267- (Aspergillus niger CBS 513.88)
GACATCTCCAACATCCGCGTCAAGAACCTCCAGCAAAAGGAATACTTGGA
CAAGACACAGGGCGGTGCAGCTATCACGGAGACTTCGGAGGCAGTGGAGA
TCAACAAGGAAACGGACCGTGTGTACAAGGCATTGGATCCGAAGGTGCCG
ATTATCGTGTCCACGGCGTCGGATGATCAGCCTCTGTTCTCGATCACAAG
GGAGGCCTTGACGGATGTGGTGGTGTGGAACCCCTGGATCGAGAAGGCCA
AGGGTATGGCGGACTTTGGTCCCGATGAGGCATACAAGAACATGCTTTGT
GTCGAGGCCGGTTCTGTTGCTGGATGGCAGACCCTGGAGGCAGGCGAATC
TTGGGAAGGTGGACAGACTATCCGGCCCCGGCTGTAGGTCTTCGGTCCTC
CTCCCTCCAATCACGCCACCTCTGCACTCCCTCAACACGGCTTTGCCCGG
AACTCGAACTGGGAATTCCTCGGCAAATCCTCGTCCGAAGCGTTCGGCCG
CGACCGGAAAGAAGGCGAAGACGCTGTGAAGTTGGACTTCGGATTGTCGC
ATCCTATGCTGAGCGAGGAATTCCAGAAGGCCTGGCCGTATCAGTTTGGA
TTGGTGTATAGCGTAACTTTGACAAAGGGGAGCCTGGAGACTTCTCTGCA
GGTGCAGAACCAGGGCGAGCAGAATTTCGATTTCCAGGTGTTGATGCACA
CGTATTTGAGTGTTGAGATGGATCGTTCCAACAAGCCTGCCGCCATCGGC
GTCGGTGCCTCTCTTCCCCAACCCACCATCTCCCTCCGCGACAACACCGT
TGAAGCTACCCTCCCCACCGGCGAGTCCGTCACTGTCCACCTCTACGGAG
CCACCGTCACCTCCTGGAAGCTCGCCAATGGCAAGGAACAGCTCTTCGTG
AGCGAGAAGGCTCATCTAGATGGCTCCAAGCCTATCCGGGGTGGTATTCC
CGTCGTATTCCCGGACATCTCCAACATCCGCGTCAAGAACCTCCAGCAAA
AGGAATACTTGGACAAGACACAGGGCGGTGCAGCTATCACGGAGACTTCG
GAGGCAGTGGAGATCAACAAGGAAACGGACCGTGTGTACAAGGCATTGGA
TCCGAAGGTGCCGATTATCGTGTCCACGGCGTCGGATGATCAGCCTCTGT
TCTCGATCACAAGGGAGGCCTTGACGGATGTGGTGGTGTGGAACCCCTGG
ATCGAGAAGGCCAAGGGTATGGCGGACTTTGGTCCCGATGAGGCATACAA
GAACATGCTTTGTGTCGAGGCCGGTTCTGTTGCTGGATGGCAGACCCTGG
AGGCAGGCGAATCTTGGGAAGGTGGACAGACTATCCGGCCCCGGCTGTAG
GTCTTCGGTCCTCCTCCCTCCAATCACGCCACCTCTGCACTCCCTCAACA
CGGCTTTGCCCGGAACTCGAACTGGGAATTCCTCGGCAAATCCTCGTCCG
AAGCGTTCGGCCGCGACCGGAAAGAAGGCGAAGACGCTGTGAAGTTGGAC
TTCGGATTGTCGCATCCTATGCTGAGCGAGGAATTCCAGAAGGCCTGGCC
GTATCAGTTTGGATTGGTGTATAGCGTAACTTTGACAAAGGGGAGCCTGG
AGACTTCTCTGCAGGTGCAGAACCAGGGCGAGCAGAATTTCGATTTCCAG
GTGTTGATGCACACGTATTTGAGTGTTGAGATGGATCGTTCCAACAAGCC
TGCCGCCATCGGCGTCGGTGCCTCTCTTCCCCAACCCACCATCTCCCTCC
GCGACAACACCGTTGAAGCTACCCTCCCCACCGGCGAGTCCGTCACTGTC
CACCTCTACGGAGCCACCGTCACCTCCTGGAAGCTCGCCAATGGCAAGGA
ACAGCTCTTCGTGAGCGAGAAGGCTCATCTAGATGGCTCCAAGCCTATCC
GGGGTGGTATTCCCGTCGTATTCCCGGACATCTCCAACATCCGCGTCAAG
AACCTCCAGCAAAAGGAATACTTGGACAAGACACAGGGCGGTGCAGCTAT
CACGGAGACTTCGGAGGCAGTGGAGATCAACAAGGAAACGGACCGTGTGT
ACAAGGCATTGGATCCGAAGGTGCCGATTATCGTGTCCACGGCGTCGGAT
GATCAGCCTCTGTTCTCGATCACAAGGGAGGCCTTGACGGATGTGGTGGT
GTGGAACCCCTGGATCGAGAAGGCCAAGGGTATGGCGGACTTTGGTCCCG
ATGAGGCATACAAGAACATGCTTTGTGTCGAGGCCGGTTCTGTTGCTGGA
TGGCAGACCCTGGAGGCAGGCGAATCTTGGGAAGGTGGACAGACTATCCG
GCCCCGGCTGTAGGTCTTCGGTCCTCCTCCCTCCAATCACGCCACCTCTG
CACTCCCTCAACACGGCTTTGCCCGGAACTCGAACTGGGAATTCCTCGGC
AAATCCTCGTCCGAAGCGTTCGGCCGCGACCGGAAAGAAGGCGAAGACGC
TGTGAAGTTGGACTTCGGATTGTCGCATCCTATGCTGAGCGAGGAATTCC
AGAAGGCCTGGCCGTATCAGTTTGGATTGGTGTATAGCGTAACTTTGACA
AAGGGGAGCCTGGAGACTTCTCTGCAGGTGCAGAACCAGGGCGAGCAGAA
TTTCGATTTCCAGGTGTTGATGCACACGTATTTGAGTGTTGAGATGGATC
GTTCCAACAAGCCTGCCGCCATCGGCGTCGGTGCCTCTCTTCCCCAACCC
ACCATCTCCCTCCGCGACAACACCGTTGAAGCTACCCTCCCCACCGGCGA
GTCCGTCACTGTCCACCTCTACGGAGCCACCGTCACCTCCTGGAAGCTCG
CCAATGGCAAGGAACAGCTCTTCGTGAGCGAGAAGGCTCATCTAGATGGC
TCCAAGCCTATCCGGGGTGGTATTCCCGTCGTATTCCCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0030246 | carbohydrate binding |
| GO:0016853 | isomerase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011013 |
| DBxref | InterPro:IPR025532 |
| DBxref | InterPro:IPR014718 |
| DBxref | InterPro:IPR008183 |
| DBxref | PFAM:PF01263 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:937142..938267 - |
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