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CBS51388_003304-T1, CBS51388_003304-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_003304-T1
Unique NameCBS51388_003304-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An04:1062906..1064805+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_003304-T1 ID=CBS51388_003304-T1|Name=CBS51388_003304-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1900bp|location=Sequence derived from alignment at An04:1062906..1064805+ (Aspergillus niger CBS 513.88)
ATGCCTTCTGAAGATGTTTCCACCGGCTCGGTCAATGTCCCCATTGGCAC
ATTTCCCCAGACATGTTCTTCGACCGATGTCAATGCCGACCAGGTCGCTT
CACAGCTAGTCGAGAAGATCAACACAGCTCTTAGCAAAGGAGACGTGCAG
TCCCTTTCCGACCTGTTCCTCGAAGATGCCTACTGGCGAGATCATCTCTG
CTTAACATGGGACTTTTACACTGCGAAAGGCAGAGAAAACATTCAAAGCT
TTCTCAAGTCTGGCCGTCTTCCGAGTAAAGTTGAGATCGACCGCTCGACC
GCGTTCCGAGGACCCTACGTTGGCCCTATCGATGCCTTTGGCGACGTCAC
AGGAATCCTGTTTTACATTACGCTCTCTAGCCCCCTGATCACTGGACAGG
GTATCGTTCGGCTGGCAGAAAAGGACGGCGAGTGGAAAATTTTCACCTTC
TATACGTCCATGGAGAGCTTTGTCGACCACCCAGAAGCGGTGAACTTCAG
AAGGCCCCTGGGAGCACAGCATGGCGAAAGCTTGGATCGAAAGAACTGGA
AAGACCGTCGGACGGCCGAAATCGAGGCTAAAGACCGGTCTCCGACTGTT
GTGGTTGTCGGTATGCTACTCATCCAACAACTTGTTGCTATTCTAGGTGC
TGACCCGAACAGGTGCTGGCCAGTCTGGTCTCATCATTGCGGCCCGTCTT
AAGATGCTAAACATCGACGTTCTGATCATCGATCGAGAGGAGAATATTGG
GGACAACTGGCGCCAACGCTACCACCAGCTGGTCCTGCATGACCCTGTGT
GGTTTGACCACTTTCCTTACATTCCGTTCCCGCCTAATTGGCCGATCTTC
ACTCCAAAGGACAAGATAGCCGAGTGGTTCGACTGCTATGCTAAGCTACT
GGAGCTGAATGTGTGGACCAAGACCAACATCAAGGGGTCCTCATGGGACG
ACAAAGAAAAGCAGTGGACCTTGGATTTGCAGCGGCGGAAGGAGGACGGT
ACGGTGGAGAATCGTACCCTGAACCCCCGGTATATCATCCAGGCCACCGG
CCATTCTGGAAAGAAGAATGTGCCTGACTTCAAGGGCATGGATTCCTTCC
AGGGCGACCTCATCTGCCATAGCAGCGAGTTTCGCGGTGCGAAGCCCGGA
TCGAAAGGTAAAAAAGCCGTGGTGGTTGGGGCGTGCAATTCCGCCAACGA
CATTGCACAAGATTACTATGAGAACGGATATGACGTGACGATGGTGCAGC
GCAGCTCAACCTGCGTGGTTTCCTCAGAGTCAATCGTCGAAATCGGCCTC
AAAGGCTTGTACGAGGAAGCAGGACCCGGAACCGAGGAAGCCGACCTTTA
CCTTTGGAGTATTCCGGCGGAGCTGTTTAAAGCACAGCAAATCAAGGTCA
CCAAGCGTCAGAATGAGAATGACCGAGCGACGTTGGAGGGCCTGGCGCGG
GCCGGGTTCAAGGTGGACCACGGTCCAGACGGTGCGGGTCTGCTCATCAA
ATACCTCCAACGTGGCGGAGGCTACTATATCGACGTGGGGGCCAGCCAGT
TGATCATTGACGGCAAGGTGAAGGTGAAGCAGGGTCAGGAGATTACCGAG
GTCCTCCCTCACGGACTGCGGTTTGCGGACGGATCGGAGCTCCAGGCGGA
CGAGATCATCTTGGCGACTGGGTATCAGAACATGGCCACCCAAGCACAAC
TCGTGTTCGGCAAAGAGGGCGCGAAGGTGAAGGATGTCTGGGGATTCGAC
GAGACGGGCGAAATGCGCATGTGGCGGCGGACCGGACACCCAGGCTTGTG
GTTCATGGGCGGCAATCTGGCCGTCTGTCGGTATTTCTCGCGGTTGCTGG
CGCTACAGATCAAGGCGCTAGAACTTGGCGTCACTTCCTACGACGGTTAG
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Coding sequence (CDS) from alignment at An04:1062906..1064805+

>CBS51388_003304-T1 ID=CBS51388_003304-T1|Name=CBS51388_003304-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3696bp|location=Sequence derived from alignment at An04:1062906..1064805+ (Aspergillus niger CBS 513.88)
ATGCCTTCTGAAGATGTTTCCACCGGCTCGGTCAATGTCCCCATTGGCAC
ATTTCCCCAGACATGTTCTTCGACCGATGTCAATGCCGACCAGGTCGCTT
CACAGCTAGTCGAGAAGATCAACACAGCTCTTAGCAAAGGAGACGTGCAG
TCCCTTTCCGACCTGTTCCTCGAAGATGCCTACTGGCGAGATCATCTCTG
CTTAACATGGGACTTTTACACTGCGAAAGGCAGAGAAAACATTCAAAGCT
TTCTCAAGTCTGGCCGTCTTCCGAGTAAAGTTGAGATCGACCGCTCGACC
GCGTTCCGAGGACCCTACGTTGGCCCTATCGATGCCTTTGGCGACGTCAC
AGGAATCCTGTTTTACATTACGCTCTCTAGCCCCCTGATCACTGGACAGG
GTATCGTTCGGCTGGCAGAAAAGGACGGCGAGTGGAAAATTTTCACCTTC
TATACGTCCATGGAGAGCTTTGTCGACCACCCAGAAGCGGTGAACTTCAG
AAGGCCCCTGGGAGCACAGCATGGCGAAAGCTTGGATCGAAAGAACTGGA
AAGACCGTCGGACGGCCGAAATCGAGGCTAAAGACCGGTCTCCGACTGTT
GTGGTTGTCGGTGCTGGCCAGTCTGGTCTCATCATTGCGGCCCGTCTTAA
GATGCTAAACATCGACGTTCTGATCATCGATCGAGAGGAGAATATTGGGG
ACAACTGGCGCCAACGCTACCACCAGCTGGTCCTGCATGACCCTGTGTGG
TTTGACCACTTTCCTTACATTCCGTTCCCGCCTAATTGGCCGATCTTCAC
TCCAAAGGACAAGATAGCCGAGTGGTTCGACTGCTATGCTAAGCTACTGG
AGCTGAATGTGTGGACCAAGACCAACATCAAGGGGTCCTCATGGGACGAC
AAAGAAAAGCAGTGGACCTTGGATTTGCAGCGGCGGAAGGAGGACGGTAC
GGTGGAGAATCGTACCCTGAACCCCCGGTATATCATCCAGGCCACCGGCC
ATTCTGGAAAGAAGAATGTGCCTGACTTCAAGGGCATGGATTCCTTCCAG
GGCGACCTCATCTGCCATAGCAGCGAGTTTCGCGGTGCGAAGCCCGGATC
GAAAGGTAAAAAAGCCGTGGTGGTTGGGGCGTGCAATTCCGCCAACGACA
TTGCACAAGATTACTATGAGAACGGATATGACGTGACGATGGTGCAGCGC
AGCTCAACCTGCGTGGTTTCCTCAGAGTCAATCGTCGAAATCGGCCTCAA
AGGCTTGTACGAGGAAGCAGGACCCGGAACCGAGGAAGCCGACCTTTACC
TTTGGAGTATTCCGGCGGAGCTGTTTAAAGCACAGCAAATCAAGGTCACC
AAGCGTCAGAATGAGAATGACCGAGCGACGTTGGAGGGCCTGGCGCGGGC
CGGGTTCAAGGTGGACCACGGTCCAGACGGTGCGGGTCTGCTCATCAAAT
ACCTCCAACGTGGCGGAGGCTACTATATCGACGTGGGGGCCAGCCAGTTG
ATCATTGACGGCAAGGTGAAGGTGAAGCAGGGTCAGGAGATTACCGAGGT
CCTCCCTCACGGACTGCGGTTTGCGGACGGATCGGAGCTCCAGGCGGACG
AGATCATCTTGGCGACTGGGTATCAGAACATGGCCACCCAAGCACAACTC
GTGTTCGGCAAAGAGGGCGCGAAGGTGAAGGATGTCTGGGGATTCGACGA
GACGGGCGAAATGCGCATGTGGCGGCGGACCGGACACCCAGGCTTGTGGT
TCATGGGCGGCAATCTGGCCGTCTGTCGGTATTTCTCGCGGTTGCTGGCG
CTACAGATCAAGGCGCTAGAACTTGGCGTCACTTCCTACGACGGTTAGAT
GCCTTCTGAAGATGTTTCCACCGGCTCGGTCAATGTCCCCATTGGCACAT
TTCCCCAGACATGTTCTTCGACCGATGTCAATGCCGACCAGGTCGCTTCA
CAGCTAGTCGAGAAGATCAACACAGCTCTTAGCAAAGGAGACGTGCAGTC
CCTTTCCGACCTGTTCCTCGAAGATGCCTACTGGCGAGATCATCTCTGCT
TAACATGGGACTTTTACACTGCGAAAGGCAGAGAAAACATTCAAAGCTTT
CTCAAGTCTGGCCGTCTTCCGAGTAAAGTTGAGATCGACCGCTCGACCGC
GTTCCGAGGACCCTACGTTGGCCCTATCGATGCCTTTGGCGACGTCACAG
GAATCCTGTTTTACATTACGCTCTCTAGCCCCCTGATCACTGGACAGGGT
ATCGTTCGGCTGGCAGAAAAGGACGGCGAGTGGAAAATTTTCACCTTCTA
TACGTCCATGGAGAGCTTTGTCGACCACCCAGAAGCGGTGAACTTCAGAA
GGCCCCTGGGAGCACAGCATGGCGAAAGCTTGGATCGAAAGAACTGGAAA
GACCGTCGGACGGCCGAAATCGAGGCTAAAGACCGGTCTCCGACTGTTGT
GGTTGTCGGTGCTGGCCAGTCTGGTCTCATCATTGCGGCCCGTCTTAAGA
TGCTAAACATCGACGTTCTGATCATCGATCGAGAGGAGAATATTGGGGAC
AACTGGCGCCAACGCTACCACCAGCTGGTCCTGCATGACCCTGTGTGGTT
TGACCACTTTCCTTACATTCCGTTCCCGCCTAATTGGCCGATCTTCACTC
CAAAGGACAAGATAGCCGAGTGGTTCGACTGCTATGCTAAGCTACTGGAG
CTGAATGTGTGGACCAAGACCAACATCAAGGGGTCCTCATGGGACGACAA
AGAAAAGCAGTGGACCTTGGATTTGCAGCGGCGGAAGGAGGACGGTACGG
TGGAGAATCGTACCCTGAACCCCCGGTATATCATCCAGGCCACCGGCCAT
TCTGGAAAGAAGAATGTGCCTGACTTCAAGGGCATGGATTCCTTCCAGGG
CGACCTCATCTGCCATAGCAGCGAGTTTCGCGGTGCGAAGCCCGGATCGA
AAGGTAAAAAAGCCGTGGTGGTTGGGGCGTGCAATTCCGCCAACGACATT
GCACAAGATTACTATGAGAACGGATATGACGTGACGATGGTGCAGCGCAG
CTCAACCTGCGTGGTTTCCTCAGAGTCAATCGTCGAAATCGGCCTCAAAG
GCTTGTACGAGGAAGCAGGACCCGGAACCGAGGAAGCCGACCTTTACCTT
TGGAGTATTCCGGCGGAGCTGTTTAAAGCACAGCAAATCAAGGTCACCAA
GCGTCAGAATGAGAATGACCGAGCGACGTTGGAGGGCCTGGCGCGGGCCG
GGTTCAAGGTGGACCACGGTCCAGACGGTGCGGGTCTGCTCATCAAATAC
CTCCAACGTGGCGGAGGCTACTATATCGACGTGGGGGCCAGCCAGTTGAT
CATTGACGGCAAGGTGAAGGTGAAGCAGGGTCAGGAGATTACCGAGGTCC
TCCCTCACGGACTGCGGTTTGCGGACGGATCGGAGCTCCAGGCGGACGAG
ATCATCTTGGCGACTGGGTATCAGAACATGGCCACCCAAGCACAACTCGT
GTTCGGCAAAGAGGGCGCGAAGGTGAAGGATGTCTGGGGATTCGACGAGA
CGGGCGAAATGCGCATGTGGCGGCGGACCGGACACCCAGGCTTGTGGTTC
ATGGGCGGCAATCTGGCCGTCTGTCGGTATTTCTCGCGGTTGCTGGCGCT
ACAGATCAAGGCGCTAGAACTTGGCGTCACTTCCTACGACGGTTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_003304CBS51388_003304Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003304-T1.exon1CBS51388_003304-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_003304-T1.exon2CBS51388_003304-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003304-T1.cdsCBS51388_003304-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003304-T1CBS51388_003304-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR032710
DBxrefInterPro:IPR036188
DBxrefPFAM:PF13738
DBxrefPFAM:PF07992
DBxrefPFAM:PF13450
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An04supercontigAn04:1062906..1064805 +
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