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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:1097425..1099659+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003311-T1 ID=CBS51388_003311-T1|Name=CBS51388_003311-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2235bp|location=Sequence derived from alignment at An04:1097425..1099659+ (Aspergillus niger CBS 513.88)
ATGCTTGATAAACACATACCAGATGGTCATTTGGAGACCACAAGTGCCCA
CTGGAGAGACTTGAATCAAGTTGTTCAGAATGGGGAACTCAGTATCGACG
GCTATAGCCTTAGTCTTGCCGATGTTGTCGCGGTAGCGAAGTCAGCCAAC
ACCCATTCAATTGTTATCTACTCACACGAATGGGTCTAACAGTTGAGATA
GATACGGCTGCCAGCCTCGACTTACTGATAAGCCCGAGACGATCGATGCT
ATAAATGGAAGTGTCATAGCACTAGCCGAATGCCTTCGAGATGGGCATCA
TATTTACGGTGAGTCGAGCCTTTCATATTGGAATTTAAATAGTGTACTAA
TGGACCAACCCATCTATCAGGCGTCAATACCGGATTTGGAGGAAGTGCTG
ACTCACGAACGAACCAAACGACCACTTTGCAGAGCTCCCTCCTTCAGCTA
CTCCAAAGCGGCATTCTTACCGCATCTGATACTACCAATGAAGGCTTACA
GCTCAATCTCCAAGGGCAGAGCTCCCACTCCATGCCTTCTGAATGGGTCA
AGGCAACTATGCTTGTGAGAAGCAATTCAGTTGCTCGGGGCCATTCAGCA
GTGTCCCTGCCTGCAATTAGCGCAATTTTGCGGTTGATTCGTGAGGATAT
CGTCCCTGTAATTCCTCTGCGGGGAACTATTTCCGCGTCTGGGGATCTCA
TGCCGCTCGCATACGTTGTTGGGGCTATTGAAGGAAGTCCCGGGATTTAT
GTGCGCGTCAAGGACGGATCGGAGCATCAAGTTGTCACGGCTCAAAAGGC
ACTACAGACAATTGGTGCTAAAGGAGTCACGCTGGGACCCAAGGAGGGCC
TTGGTTTGGTCAACGGCACAGCCGCTTCGGGTGCTCTTGCCGGCTTAGTG
CTCTATGAGGCGCATCAGCTGGCCGTACTTGCGCAGGCAGTCACTGCTCT
GACAGTAGAGGCCATACAAGGGAGCACAGAAAGTTTTCATCCTTTTATCG
CCCAGGTGCGCCCGCATGAAGGCCAGATTGAAGCTGCGGAGAACATTCTA
TCTCTCCTGAAAGGCTCCCTACTTGCGAGAGGAAGTAGTACCACCCAAAC
TAGGACGGGCCTCGTGCAAGATCGTTATTCTCTCCGAACAGCCAGTCAAT
GGATTGGGCCCCAACTGGAAGATCTTCTTCTCGCAGATCGGCAAGTCCAG
GTCGAGCTCAATTCGACGTCAGATAACCCGCTTATTGATACGGGCTCGAA
GACCTTCTACACTGGAGGGAACTTCCAAGCAACTTCAATTACTTCTGCGA
TGGAGAAGACTCGACTTGCGTTGCAAATGTTCGGGAAGATGTTGTTTGTT
CAGTGCAACGAGATGATAGACCCCAATTTGAACAATGGTCTGCCTACCAA
TCTAGTCGCCGACGATCCCAGCCTCTCCTTCACCATGAAGGGGGTAGATA
TCAACATGGCGGCCTACATGTCTGAGTTAGCGTATCTCGCCAACCCAGTT
AGCTCCCACGTTCAGACTGCAGAGATGCAAAACCAAGCGCTCAACTCACT
GGCATTTGTTTCAGCACGGTATACGATGAAGGCGGTTGACATCGTGTCAA
TGATGGGTGCGTGTGCACTATACGTTGCTTGCCAAGCCCTCGACCTGCGC
GTCCTGCAGCTTCGCTTTTTCCAAAGAGTTCAGGGTGTCGCCAAAGAAAT
TGCGCATGGAGCTTTTGGAAAAGCGCTTGAACCATTTGAGATTGATCAGG
TAGCGGATCATCTTTCCGAAGCGATCCAGAACTCTTGGCCGTCAACTTCA
CGCCTTGATCTTCGCGATCGCTGCAAGCGCGTAGCCGAGATGTTCATCCC
CGTCCTTTTCGGGGCCCTGTTACAGATAATCCCACAAAATCGGCAGACTT
CAGACCTATTTACAGCGATATCTGCATGTAAGATGATAAGCGTTTTCAAG
CTCGAAGGTGTTTATCGGGAAGTGTTTGCCGAATTTTGCACTTCGCAACC
CACTGCCGACTTCCTCGGAACAGGGACAAAGGAGATTTATACATTTATTC
GACATGATCTTCGAGTTCCATTCCACCAGGGCTTTGTCGAACACCCATCA
GCGAGCCAGACCGATTTGCCAGAGACGATCAACGGCAGAGTCAAGAAGAC
GGTGGGGGGTTGGATATCAGTTGTCTATGAAGCGTTGCGAAACGGGACGC
TGAGTGGCACAATCCTTAATTCTTTTCAACAATGA back to topCoding sequence (CDS) from alignment at An04:1097425..1099659+ >CBS51388_003311-T1 ID=CBS51388_003311-T1|Name=CBS51388_003311-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6336bp|location=Sequence derived from alignment at An04:1097425..1099659+ (Aspergillus niger CBS 513.88)
ATGCTTGATAAACACATACCAGATGGTCATTTGGAGACCACAAGTGCCCA
CTGGAGAGACTTGAATCAAGTTGTTCAGAATGGGGAACTCAGTATCGACG
GCTATAGCCTTAGTCTTGCCGATGTTGTCGCGGTAGCGAAATACGGCTGC
CAGCCTCGACTTACTGATAAGCCCGAGACGATCGATGCTATAAATGGAAG
TGTCATAGCACTAGCCGAATGCCTTCGAGATGGGCATCATATTTACGGCG
TCAATACCGGATTTGGAGGAAGTGCTGACTCACGAACGAACCAAACGACC
ACTTTGCAGAGCTCCCTCCTTCAGCTACTCCAAAGCGGCATTCTTACCGC
ATCTGATACTACCAATGAAGGCTTACAGCTCAATCTCCAAGGGCAGAGCT
CCCACTCCATGCCTTCTGAATGGGTCAAGGCAACTATGCTTGTGAGAAGC
AATTCAGTTGCTCGGGGCCATTCAGCAGTGTCCCTGCCTGCAATTAGCGC
AATTTTGCGGTTGATTCGTGAGGATATCGTCCCTGTAATTCCTCTGCGGG
GAACTATTTCCGCGTCTGGGGATCTCATGCCGCTCGCATACGTTGTTGGG
GCTATTGAAGGAAGTCCCGGGATTTATGTGCGCGTCAAGGACGGATCGGA
GCATCAAGTTGTCACGGCTCAAAAGGCACTACAGACAATTGGTGCTAAAG
GAGTCACGCTGGGACCCAAGGAGGGCCTTGGTTTGGTCAACGGCACAGCC
GCTTCGGGTGCTCTTGCCGGCTTAGTGCTCTATGAGGCGCATCAGCTGGC
CGTACTTGCGCAGGCAGTCACTGCTCTGACAGTAGAGGCCATACAAGGGA
GCACAGAAAGTTTTCATCCTTTTATCGCCCAGGTGCGCCCGCATGAAGGC
CAGATTGAAGCTGCGGAGAACATTCTATCTCTCCTGAAAGGCTCCCTACT
TGCGAGAGGAAGTAGTACCACCCAAACTAGGACGGGCCTCGTGCAAGATC
GTTATTCTCTCCGAACAGCCAGTCAATGGATTGGGCCCCAACTGGAAGAT
CTTCTTCTCGCAGATCGGCAAGTCCAGGTCGAGCTCAATTCGACGTCAGA
TAACCCGCTTATTGATACGGGCTCGAAGACCTTCTACACTGGAGGGAACT
TCCAAGCAACTTCAATTACTTCTGCGATGGAGAAGACTCGACTTGCGTTG
CAAATGTTCGGGAAGATGTTGTTTGTTCAGTGCAACGAGATGATAGACCC
CAATTTGAACAATGGTCTGCCTACCAATCTAGTCGCCGACGATCCCAGCC
TCTCCTTCACCATGAAGGGGGTAGATATCAACATGGCGGCCTACATGTCT
GAGTTAGCGTATCTCGCCAACCCAGTTAGCTCCCACGTTCAGACTGCAGA
GATGCAAAACCAAGCGCTCAACTCACTGGCATTTGTTTCAGCACGGTATA
CGATGAAGGCGGTTGACATCGTGTCAATGATGGGTGCGTGTGCACTATAC
GTTGCTTGCCAAGCCCTCGACCTGCGCGTCCTGCAGCTTCGCTTTTTCCA
AAGAGTTCAGGGTGTCGCCAAAGAAATTGCGCATGGAGCTTTTGGAAAAG
CGCTTGAACCATTTGAGATTGATCAGGTAGCGGATCATCTTTCCGAAGCG
ATCCAGAACTCTTGGCCGTCAACTTCACGCCTTGATCTTCGCGATCGCTG
CAAGCGCGTAGCCGAGATGTTCATCCCCGTCCTTTTCGGGGCCCTGTTAC
AGATAATCCCACAAAATCGGCAGACTTCAGACCTATTTACAGCGATATCT
GCATGTAAGATGATAAGCGTTTTCAAGCTCGAAGGTGTTTATCGGGAAGT
GTTTGCCGAATTTTGCACTTCGCAACCCACTGCCGACTTCCTCGGAACAG
GGACAAAGGAGATTTATACATTTATTCGACATGATCTTCGAGTTCCATTC
CACCAGGGCTTTGTCGAACACCCATCAGCGAGCCAGACCGATTTGCCAGA
GACGATCAACGGCAGAGTCAAGAAGACGGTGGGGGGTTGGATATCAGTTG
TCTATGAAGCGTTGCGAAACGGGACGCTGAGTGGCACAATCCTTAATTCT
TTTCAACAATGAATGCTTGATAAACACATACCAGATGGTCATTTGGAGAC
CACAAGTGCCCACTGGAGAGACTTGAATCAAGTTGTTCAGAATGGGGAAC
TCAGTATCGACGGCTATAGCCTTAGTCTTGCCGATGTTGTCGCGGTAGCG
AAATACGGCTGCCAGCCTCGACTTACTGATAAGCCCGAGACGATCGATGC
TATAAATGGAAGTGTCATAGCACTAGCCGAATGCCTTCGAGATGGGCATC
ATATTTACGGCGTCAATACCGGATTTGGAGGAAGTGCTGACTCACGAACG
AACCAAACGACCACTTTGCAGAGCTCCCTCCTTCAGCTACTCCAAAGCGG
CATTCTTACCGCATCTGATACTACCAATGAAGGCTTACAGCTCAATCTCC
AAGGGCAGAGCTCCCACTCCATGCCTTCTGAATGGGTCAAGGCAACTATG
CTTGTGAGAAGCAATTCAGTTGCTCGGGGCCATTCAGCAGTGTCCCTGCC
TGCAATTAGCGCAATTTTGCGGTTGATTCGTGAGGATATCGTCCCTGTAA
TTCCTCTGCGGGGAACTATTTCCGCGTCTGGGGATCTCATGCCGCTCGCA
TACGTTGTTGGGGCTATTGAAGGAAGTCCCGGGATTTATGTGCGCGTCAA
GGACGGATCGGAGCATCAAGTTGTCACGGCTCAAAAGGCACTACAGACAA
TTGGTGCTAAAGGAGTCACGCTGGGACCCAAGGAGGGCCTTGGTTTGGTC
AACGGCACAGCCGCTTCGGGTGCTCTTGCCGGCTTAGTGCTCTATGAGGC
GCATCAGCTGGCCGTACTTGCGCAGGCAGTCACTGCTCTGACAGTAGAGG
CCATACAAGGGAGCACAGAAAGTTTTCATCCTTTTATCGCCCAGGTGCGC
CCGCATGAAGGCCAGATTGAAGCTGCGGAGAACATTCTATCTCTCCTGAA
AGGCTCCCTACTTGCGAGAGGAAGTAGTACCACCCAAACTAGGACGGGCC
TCGTGCAAGATCGTTATTCTCTCCGAACAGCCAGTCAATGGATTGGGCCC
CAACTGGAAGATCTTCTTCTCGCAGATCGGCAAGTCCAGGTCGAGCTCAA
TTCGACGTCAGATAACCCGCTTATTGATACGGGCTCGAAGACCTTCTACA
CTGGAGGGAACTTCCAAGCAACTTCAATTACTTCTGCGATGGAGAAGACT
CGACTTGCGTTGCAAATGTTCGGGAAGATGTTGTTTGTTCAGTGCAACGA
GATGATAGACCCCAATTTGAACAATGGTCTGCCTACCAATCTAGTCGCCG
ACGATCCCAGCCTCTCCTTCACCATGAAGGGGGTAGATATCAACATGGCG
GCCTACATGTCTGAGTTAGCGTATCTCGCCAACCCAGTTAGCTCCCACGT
TCAGACTGCAGAGATGCAAAACCAAGCGCTCAACTCACTGGCATTTGTTT
CAGCACGGTATACGATGAAGGCGGTTGACATCGTGTCAATGATGGGTGCG
TGTGCACTATACGTTGCTTGCCAAGCCCTCGACCTGCGCGTCCTGCAGCT
TCGCTTTTTCCAAAGAGTTCAGGGTGTCGCCAAAGAAATTGCGCATGGAG
CTTTTGGAAAAGCGCTTGAACCATTTGAGATTGATCAGGTAGCGGATCAT
CTTTCCGAAGCGATCCAGAACTCTTGGCCGTCAACTTCACGCCTTGATCT
TCGCGATCGCTGCAAGCGCGTAGCCGAGATGTTCATCCCCGTCCTTTTCG
GGGCCCTGTTACAGATAATCCCACAAAATCGGCAGACTTCAGACCTATTT
ACAGCGATATCTGCATGTAAGATGATAAGCGTTTTCAAGCTCGAAGGTGT
TTATCGGGAAGTGTTTGCCGAATTTTGCACTTCGCAACCCACTGCCGACT
TCCTCGGAACAGGGACAAAGGAGATTTATACATTTATTCGACATGATCTT
CGAGTTCCATTCCACCAGGGCTTTGTCGAACACCCATCAGCGAGCCAGAC
CGATTTGCCAGAGACGATCAACGGCAGAGTCAAGAAGACGGTGGGGGGTT
GGATATCAGTTGTCTATGAAGCGTTGCGAAACGGGACGCTGAGTGGCACA
ATCCTTAATTCTTTTCAACAATGAATGCTTGATAAACACATACCAGATGG
TCATTTGGAGACCACAAGTGCCCACTGGAGAGACTTGAATCAAGTTGTTC
AGAATGGGGAACTCAGTATCGACGGCTATAGCCTTAGTCTTGCCGATGTT
GTCGCGGTAGCGAAATACGGCTGCCAGCCTCGACTTACTGATAAGCCCGA
GACGATCGATGCTATAAATGGAAGTGTCATAGCACTAGCCGAATGCCTTC
GAGATGGGCATCATATTTACGGCGTCAATACCGGATTTGGAGGAAGTGCT
GACTCACGAACGAACCAAACGACCACTTTGCAGAGCTCCCTCCTTCAGCT
ACTCCAAAGCGGCATTCTTACCGCATCTGATACTACCAATGAAGGCTTAC
AGCTCAATCTCCAAGGGCAGAGCTCCCACTCCATGCCTTCTGAATGGGTC
AAGGCAACTATGCTTGTGAGAAGCAATTCAGTTGCTCGGGGCCATTCAGC
AGTGTCCCTGCCTGCAATTAGCGCAATTTTGCGGTTGATTCGTGAGGATA
TCGTCCCTGTAATTCCTCTGCGGGGAACTATTTCCGCGTCTGGGGATCTC
ATGCCGCTCGCATACGTTGTTGGGGCTATTGAAGGAAGTCCCGGGATTTA
TGTGCGCGTCAAGGACGGATCGGAGCATCAAGTTGTCACGGCTCAAAAGG
CACTACAGACAATTGGTGCTAAAGGAGTCACGCTGGGACCCAAGGAGGGC
CTTGGTTTGGTCAACGGCACAGCCGCTTCGGGTGCTCTTGCCGGCTTAGT
GCTCTATGAGGCGCATCAGCTGGCCGTACTTGCGCAGGCAGTCACTGCTC
TGACAGTAGAGGCCATACAAGGGAGCACAGAAAGTTTTCATCCTTTTATC
GCCCAGGTGCGCCCGCATGAAGGCCAGATTGAAGCTGCGGAGAACATTCT
ATCTCTCCTGAAAGGCTCCCTACTTGCGAGAGGAAGTAGTACCACCCAAA
CTAGGACGGGCCTCGTGCAAGATCGTTATTCTCTCCGAACAGCCAGTCAA
TGGATTGGGCCCCAACTGGAAGATCTTCTTCTCGCAGATCGGCAAGTCCA
GGTCGAGCTCAATTCGACGTCAGATAACCCGCTTATTGATACGGGCTCGA
AGACCTTCTACACTGGAGGGAACTTCCAAGCAACTTCAATTACTTCTGCG
ATGGAGAAGACTCGACTTGCGTTGCAAATGTTCGGGAAGATGTTGTTTGT
TCAGTGCAACGAGATGATAGACCCCAATTTGAACAATGGTCTGCCTACCA
ATCTAGTCGCCGACGATCCCAGCCTCTCCTTCACCATGAAGGGGGTAGAT
ATCAACATGGCGGCCTACATGTCTGAGTTAGCGTATCTCGCCAACCCAGT
TAGCTCCCACGTTCAGACTGCAGAGATGCAAAACCAAGCGCTCAACTCAC
TGGCATTTGTTTCAGCACGGTATACGATGAAGGCGGTTGACATCGTGTCA
ATGATGGGTGCGTGTGCACTATACGTTGCTTGCCAAGCCCTCGACCTGCG
CGTCCTGCAGCTTCGCTTTTTCCAAAGAGTTCAGGGTGTCGCCAAAGAAA
TTGCGCATGGAGCTTTTGGAAAAGCGCTTGAACCATTTGAGATTGATCAG
GTAGCGGATCATCTTTCCGAAGCGATCCAGAACTCTTGGCCGTCAACTTC
ACGCCTTGATCTTCGCGATCGCTGCAAGCGCGTAGCCGAGATGTTCATCC
CCGTCCTTTTCGGGGCCCTGTTACAGATAATCCCACAAAATCGGCAGACT
TCAGACCTATTTACAGCGATATCTGCATGTAAGATGATAAGCGTTTTCAA
GCTCGAAGGTGTTTATCGGGAAGTGTTTGCCGAATTTTGCACTTCGCAAC
CCACTGCCGACTTCCTCGGAACAGGGACAAAGGAGATTTATACATTTATT
CGACATGATCTTCGAGTTCCATTCCACCAGGGCTTTGTCGAACACCCATC
AGCGAGCCAGACCGATTTGCCAGAGACGATCAACGGCAGAGTCAAGAAGA
CGGTGGGGGGTTGGATATCAGTTGTCTATGAAGCGTTGCGAAACGGGACG
CTGAGTGGCACAATCCTTAATTCTTTTCAACAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005737 | cytoplasm |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0016841 | ammonia-lyase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006559 | L-phenylalanine catabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_4.3 |
| Note | antiSMASH:Cluster_4.2 |
| DBxref | InterPro:IPR008948 |
| DBxref | InterPro:IPR022313 |
| DBxref | InterPro:IPR024083 |
| DBxref | InterPro:IPR001106 |
| DBxref | InterPro:IPR005922 |
| DBxref | InterPro:IPR023144 |
| DBxref | PFAM:PF00221 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:1097425..1099659 + |
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