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CBS51388_003314-T1, CBS51388_003314-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_003314-T1
Unique NameCBS51388_003314-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An04:1106798..1108519-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_003314-T1 ID=CBS51388_003314-T1|Name=CBS51388_003314-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1722bp|location=Sequence derived from alignment at An04:1106798..1108519- (Aspergillus niger CBS 513.88)
ATGGAGAGACCCTCCCCTGAAGCCGATGTTATCTGGTGGGACTCGAGTTC
GTACTACGTACGATGTCCGTTCTGCGAAGGGGTTCATCGGCATACCGTAA
ACTGGCAGACCAGTCTGTTTAGAGTATCAGATTGCGAGAAAGGGGAAACT
TACCAATCCTGCTTTCCCATTAATGATCAAGGGGAGGTCGCGTATGAGAT
TGATAAGAAACGTGAGCGATATGTCAATATTTGTGTATCGAACGATAGCG
ATACTGAGGCCGATGACAATGAGGACGAAGACGACGTTGATCGCCTGGCA
ACTGAAATGGCTCATAAGGCTACTATCGCAGCAGAGAGGGAAGAACGTCA
TCTGAGTATCACCAGGGACGCTAAAGAAACTATTATCCACACTATAGATG
GTGAAAAATCTTTCGAATATAGACTGATCTATGACGCCATCACAGACTGC
TTCAATGGCAAAACAAGAGCGGTGCAGGGATATTTGAAGACGTCTAGTGA
GGCTGAGTTGTTTGTTCGGGGACAACACCCCGATGGTAAAACAATGCTTA
TCTCTGCGGCGTCAGAAAAGACCCCAGAAATGCTGTCACTTCTCATTGAA
CACGGGGCTGACGTGAATGCCGTTGACAATCACGGAAGGAGTGCTCTCAT
GGAGGCAGCGCTTTTTGGTCGGGTTGGCAATGTGAAGGTTCTCCTCGAAC
ACGGTGCAGACCCAAATATCCGGGATGACGAGAATCGACGGGCAGTTTAC
TTTGCTCGAGAGTCTCGCAAAAATCGAAAAGAGAGAAATGTTCGTACCCA
GGACACTTACGAAATGCTTGTTGGCCGCCAAGAGATTGTACGCCTTCTCA
GTGGAGAGATTCCAAAGTCAAAGAATGCTTTTGGCAAACCTCCCACACCA
TCGCTCTCTCGGCCCTATCGTTTTCTATCCTCCAACGGTGGATATACGAA
GGTATTACATGGACCAATCGAAGAGTATCCAATGACGAAATGCGGGAAAA
CAGTGGCGCGGCTGGAACGAGGAGGGAAATTCCCGTCTGTTGGTGCGATG
AGCGGATGGTCACATACTCCTGCGCAACCACTAAGAGTCGACGCTCGTCA
GTGGACAGATGATGTCTTTTACATCGCGGAAATAGTGGGCCACCATTTGG
CTTCCCATGCTTGTGATCAGGGTATATGCGGTCAGTACAATGCATGCCAC
GCAGAAAAACAGTTGATAGCATATTTCATTGATCGCCATGTTTTCCTTCC
ACGCGATGGCCTCCCAGATCCGAAATTAGAGGAGGAGATCACTAGGGTAG
AGGATGAGCTGGAAAGGATAACTTCATGCACGGAAATAGGACGCGTGGTG
GCTTCTCTACGGAAGGAGAAGCAGGAACTCGATGATGAGCTTTTTGATGG
AGATGAGAAGCTAGTCGGAAAAGATGATGAGATCAAGAAACTGGAGTCAA
AACGCAGGGATGTTAAAACCGCACTAAATCAGCTTATTGCTAGTCCTCGC
GCGCGACGATTACGGATGCTAGAATGCAAGCTGGAGATACTAGGTGTGCA
GCGACAGAGACATGAAGACCTGACCGAAATGGCTGAGGCACCACCGCCAC
CGGCTTCACTATCCGAAGCGGCCATATTGGTCAGTTCAGTTCCTTGCGAT
GACTGCAAAGCGTTCACGGAAAGAGTCAACAAGCACTTTGGATTATGTAT
ACAGTTATTCGCATCAGTTTGA
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Coding sequence (CDS) from alignment at An04:1106798..1108519-

>CBS51388_003314-T1 ID=CBS51388_003314-T1|Name=CBS51388_003314-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1722bp|location=Sequence derived from alignment at An04:1106798..1108519- (Aspergillus niger CBS 513.88)
ATGGAGAGACCCTCCCCTGAAGCCGATGTTATCTGGTGGGACTCGAGTTC
GTACTACGTACGATGTCCGTTCTGCGAAGGGGTTCATCGGCATACCGTAA
ACTGGCAGACCAGTCTGTTTAGAGTATCAGATTGCGAGAAAGGGGAAACT
TACCAATCCTGCTTTCCCATTAATGATCAAGGGGAGGTCGCGTATGAGAT
TGATAAGAAACGTGAGCGATATGTCAATATTTGTGTATCGAACGATAGCG
ATACTGAGGCCGATGACAATGAGGACGAAGACGACGTTGATCGCCTGGCA
ACTGAAATGGCTCATAAGGCTACTATCGCAGCAGAGAGGGAAGAACGTCA
TCTGAGTATCACCAGGGACGCTAAAGAAACTATTATCCACACTATAGATG
GTGAAAAATCTTTCGAATATAGACTGATCTATGACGCCATCACAGACTGC
TTCAATGGCAAAACAAGAGCGGTGCAGGGATATTTGAAGACGTCTAGTGA
GGCTGAGTTGTTTGTTCGGGGACAACACCCCGATGGTAAAACAATGCTTA
TCTCTGCGGCGTCAGAAAAGACCCCAGAAATGCTGTCACTTCTCATTGAA
CACGGGGCTGACGTGAATGCCGTTGACAATCACGGAAGGAGTGCTCTCAT
GGAGGCAGCGCTTTTTGGTCGGGTTGGCAATGTGAAGGTTCTCCTCGAAC
ACGGTGCAGACCCAAATATCCGGGATGACGAGAATCGACGGGCAGTTTAC
TTTGCTCGAGAGTCTCGCAAAAATCGAAAAGAGAGAAATGTTCGTACCCA
GGACACTTACGAAATGCTTGTTGGCCGCCAAGAGATTGTACGCCTTCTCA
GTGGAGAGATTCCAAAGTCAAAGAATGCTTTTGGCAAACCTCCCACACCA
TCGCTCTCTCGGCCCTATCGTTTTCTATCCTCCAACGGTGGATATACGAA
GGTATTACATGGACCAATCGAAGAGTATCCAATGACGAAATGCGGGAAAA
CAGTGGCGCGGCTGGAACGAGGAGGGAAATTCCCGTCTGTTGGTGCGATG
AGCGGATGGTCACATACTCCTGCGCAACCACTAAGAGTCGACGCTCGTCA
GTGGACAGATGATGTCTTTTACATCGCGGAAATAGTGGGCCACCATTTGG
CTTCCCATGCTTGTGATCAGGGTATATGCGGTCAGTACAATGCATGCCAC
GCAGAAAAACAGTTGATAGCATATTTCATTGATCGCCATGTTTTCCTTCC
ACGCGATGGCCTCCCAGATCCGAAATTAGAGGAGGAGATCACTAGGGTAG
AGGATGAGCTGGAAAGGATAACTTCATGCACGGAAATAGGACGCGTGGTG
GCTTCTCTACGGAAGGAGAAGCAGGAACTCGATGATGAGCTTTTTGATGG
AGATGAGAAGCTAGTCGGAAAAGATGATGAGATCAAGAAACTGGAGTCAA
AACGCAGGGATGTTAAAACCGCACTAAATCAGCTTATTGCTAGTCCTCGC
GCGCGACGATTACGGATGCTAGAATGCAAGCTGGAGATACTAGGTGTGCA
GCGACAGAGACATGAAGACCTGACCGAAATGGCTGAGGCACCACCGCCAC
CGGCTTCACTATCCGAAGCGGCCATATTGGTCAGTTCAGTTCCTTGCGAT
GACTGCAAAGCGTTCACGGAAAGAGTCAACAAGCACTTTGGATTATGTAT
ACAGTTATTCGCATCAGTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_003314CBS51388_003314Aspergillus niger CBS 513.88gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003314-T1.cdsCBS51388_003314-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003314-T1.exon1CBS51388_003314-T1.exon1Aspergillus niger CBS 513.88exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003314-T1CBS51388_003314-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_4.3
NoteantiSMASH:Cluster_4.2
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13857
DBxrefPFAM:PF13637
DBxrefPFAM:PF13606
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An04supercontigAn04:1106798..1108519 -
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