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CBS51388_003320-T1, CBS51388_003320-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_003320-T1
Unique NameCBS51388_003320-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An04:1121148..1123232+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_003320-T1 ID=CBS51388_003320-T1|Name=CBS51388_003320-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2085bp|location=Sequence derived from alignment at An04:1121148..1123232+ (Aspergillus niger CBS 513.88)
ATGTCGGCCCGGCCCAATGACATTCGTCGGGTTGCCAACTTCGTCTCTGC
CCAACCCAGCCCGACTGACTCCCCGTCCACGGCTCCGCCAGCGGGAATGA
CGCCTCCTCCCCGCGAGCGGGTCCCTCGGGCCTGTGAACACTGCCGGGCC
CGCAAGATCAAATGCAATGGCCAGCAGCCGTGCAATGCCTGCGCGCGCCA
TCCAGAGCGATGTCTCTACCGGACAGGAAGCATTCGCCAGAGGAAGAACC
GTCGCACCAAGGAAGCCCCGCGACCACCAGCTACCTTACTCCCTCTCCCG
ACCACCGACTCGCCGACTACTCCAAGCGACTGGTCCCACACCAGTTTAAG
CGATGGCCCGGCGCAGTATAAGCGACACCATGAGCTCCGTGCTGGCATCG
GCGTACAGAACCCGGAGACCGGGGCATTTCAGTTCTATGGTACATTCAGT
TCCCTACGTTTGGCTGGCTCTGTTAACCCTCGAAGGACCCTCTTCCGGCT
TCTGCTTCATCCACCGGGTCTACCAACGCATCAAGCAAGGCTCGTCTAGT
GAGCCGCTGCTTGCTCGACGGAGCTGCTCCATTCCAGATGCTATCCACCG
ATTTGGTCTGGAGCGCTTCATGTTTGCCCGGCCAGGAGATTCGGATCCGC
GGCGGACTCATTTTCCATCTCAGATGTTCCTCCCCAGGGAGTTGGGGGAT
CAGTTCATTGAGGCCTATTTCCGCATTATGCACCCACAGATACCCATCCT
CATAAAGTCCGAGATTGACGATGCTTGGAACCAAATGTGGGAGTCTCCTG
TACGCGACCACAGCGTTAAAAATCAGGACATCCTATTCATGGTGCTGGCT
ATCGGCGCTCGGGTCGCCAACCTGAAGGGGAAGCAACCCGAAAGCAGTGT
CGCGGCTTGGGCCGATTACTTTTCCAGTCGAGTATCTGAGGGGCCCATCT
TTCTGCAGGAACCGAGTATCAGAGGTGTACACTTGATGCTGCTGAAGGTG
CGTCACCGACATCTGCCAATTGAAACTCGCTAATCCAATAAAAGTCTATG
TACGCTTTGCAGCTGATGCGACAAAACGATGCTTATCTTTACCTGGGTCA
CGCCACTCGCACCTGTCTCGTACTAGGTTTGCACCGGGCTCAGGTCACCG
ATGGCCGCGATCCCACCGTACACCGGCTGCGTTTGACCTTTTGGACGACG
TTCTTTTGCGAGCGCATATCTTCTCTGTACATGGGCCGTCCGTCGAGCCT
TTCTGACCGACAAATTGACACAGCCTATCCCGAGGACCTGCCGCCGAATC
CCTATGACAGCACTTGTGCGCCCATGCAAGAATGCGCATTCATCCGAGCC
ATGGGCGAGATCGCCAAGCTGGCGGATCGCATCTCTATCGAGATATATTC
GCCGGCCAGCATTAAAAACCCTACGGACCTGGACAAGCTCAACCAAATCA
GCGTTGAATGCGACCACGCCCTCCAAGCTGTCACCCCGACACTACCAAGT
TACCTGCACTTCTTCGATGACAGCGTTCCAATTGGCGAGCCCTGGCAGGA
GATCCAACGCCTGAGTCTTGGATTCTGCTACTACGTCGTCCGGATGCTCC
TCTCCCGCCCGGCACTGGTGCTTACCACATTTTTCTCCTCGGTACAAGAA
GCCCAGATCGCCACTGGCTGCACTGAGCTCCAATCTTTCATCAATTCATC
GACTTCCGCAGCGCGGAATTTGATCCACCTCGCTCATGACGTCTATTTCC
GTCGTTTCCCAGATATACGCTATGACGGAGCTCTAGCTTCGTTCCTTCTG
TCTGCGTCACTGACTCTCTTATATGATGTGCTCAATCTAGGAACTGATCC
AGACCGAGCTAGGCAGACATTCACAGTCGTGGAAAAGGCGATAAAGTGCC
TCGATGAGATAGAGCATACGGGGTACACGTCGGGCAAGGCGTTGAGCCTG
GACCTGATGAGAGTGGCCAAGCAAGCGGTGCAAGCGGCAGATCCGGTGGT
GGACACTAATCAGGTCTTGATGGATGCGTTCCCGTGGTTAGAGTATGTTT
CCCCCTCTTGTTGTCAGACTATGCTGACTGAGTAG
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Coding sequence (CDS) from alignment at An04:1121148..1123232+

>CBS51388_003320-T1 ID=CBS51388_003320-T1|Name=CBS51388_003320-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5922bp|location=Sequence derived from alignment at An04:1121148..1123232+ (Aspergillus niger CBS 513.88)
ATGTCGGCCCGGCCCAATGACATTCGTCGGGTTGCCAACTTCGTCTCTGC
CCAACCCAGCCCGACTGACTCCCCGTCCACGGCTCCGCCAGCGGGAATGA
CGCCTCCTCCCCGCGAGCGGGTCCCTCGGGCCTGTGAACACTGCCGGGCC
CGCAAGATCAAATGCAATGGCCAGCAGCCGTGCAATGCCTGCGCGCGCCA
TCCAGAGCGATGTCTCTACCGGACAGGAAGCATTCGCCAGAGGAAGAACC
GTCGCACCAAGGAAGCCCCGCGACCACCAGCTACCTTACTCCCTCTCCCG
ACCACCGACTCGCCGACTACTCCAAGCGACTGGTCCCACACCAGTTTAAG
CGATGGCCCGGCGCAGTATAAGCGACACCATGAGCTCCGTGCTGGCATCG
GCGTACAGAACCCGGAGACCGGGGCATTTCAGTTCTATGGACCCTCTTCC
GGCTTCTGCTTCATCCACCGGGTCTACCAACGCATCAAGCAAGGCTCGTC
TAGTGAGCCGCTGCTTGCTCGACGGAGCTGCTCCATTCCAGATGCTATCC
ACCGATTTGGTCTGGAGCGCTTCATGTTTGCCCGGCCAGGAGATTCGGAT
CCGCGGCGGACTCATTTTCCATCTCAGATGTTCCTCCCCAGGGAGTTGGG
GGATCAGTTCATTGAGGCCTATTTCCGCATTATGCACCCACAGATACCCA
TCCTCATAAAGTCCGAGATTGACGATGCTTGGAACCAAATGTGGGAGTCT
CCTGTACGCGACCACAGCGTTAAAAATCAGGACATCCTATTCATGGTGCT
GGCTATCGGCGCTCGGGTCGCCAACCTGAAGGGGAAGCAACCCGAAAGCA
GTGTCGCGGCTTGGGCCGATTACTTTTCCAGTCGAGTATCTGAGGGGCCC
ATCTTTCTGCAGGAACCGAGTATCAGAGGTGTACACTTGATGCTGCTGAA
GCTGATGCGACAAAACGATGCTTATCTTTACCTGGGTCACGCCACTCGCA
CCTGTCTCGTACTAGGTTTGCACCGGGCTCAGGTCACCGATGGCCGCGAT
CCCACCGTACACCGGCTGCGTTTGACCTTTTGGACGACGTTCTTTTGCGA
GCGCATATCTTCTCTGTACATGGGCCGTCCGTCGAGCCTTTCTGACCGAC
AAATTGACACAGCCTATCCCGAGGACCTGCCGCCGAATCCCTATGACAGC
ACTTGTGCGCCCATGCAAGAATGCGCATTCATCCGAGCCATGGGCGAGAT
CGCCAAGCTGGCGGATCGCATCTCTATCGAGATATATTCGCCGGCCAGCA
TTAAAAACCCTACGGACCTGGACAAGCTCAACCAAATCAGCGTTGAATGC
GACCACGCCCTCCAAGCTGTCACCCCGACACTACCAAGTTACCTGCACTT
CTTCGATGACAGCGTTCCAATTGGCGAGCCCTGGCAGGAGATCCAACGCC
TGAGTCTTGGATTCTGCTACTACGTCGTCCGGATGCTCCTCTCCCGCCCG
GCACTGGTGCTTACCACATTTTTCTCCTCGGTACAAGAAGCCCAGATCGC
CACTGGCTGCACTGAGCTCCAATCTTTCATCAATTCATCGACTTCCGCAG
CGCGGAATTTGATCCACCTCGCTCATGACGTCTATTTCCGTCGTTTCCCA
GATATACGCTATGACGGAGCTCTAGCTTCGTTCCTTCTGTCTGCGTCACT
GACTCTCTTATATGATGTGCTCAATCTAGGAACTGATCCAGACCGAGCTA
GGCAGACATTCACAGTCGTGGAAAAGGCGATAAAGTGCCTCGATGAGATA
GAGCATACGGGGTACACGTCGGGCAAGGCGTTGAGCCTGGACCTGATGAG
AGTGGCCAAGCAAGCGGTGCAAGCGGCAGATCCGGTGGTGGACACTAATC
AGGTCTTGATGGATGCGTTCCCGTGGTTAGAGTATGTTTCCCCCTCTTGT
TGTCAGACTATGCTGACTGAGTAGATGTCGGCCCGGCCCAATGACATTCG
TCGGGTTGCCAACTTCGTCTCTGCCCAACCCAGCCCGACTGACTCCCCGT
CCACGGCTCCGCCAGCGGGAATGACGCCTCCTCCCCGCGAGCGGGTCCCT
CGGGCCTGTGAACACTGCCGGGCCCGCAAGATCAAATGCAATGGCCAGCA
GCCGTGCAATGCCTGCGCGCGCCATCCAGAGCGATGTCTCTACCGGACAG
GAAGCATTCGCCAGAGGAAGAACCGTCGCACCAAGGAAGCCCCGCGACCA
CCAGCTACCTTACTCCCTCTCCCGACCACCGACTCGCCGACTACTCCAAG
CGACTGGTCCCACACCAGTTTAAGCGATGGCCCGGCGCAGTATAAGCGAC
ACCATGAGCTCCGTGCTGGCATCGGCGTACAGAACCCGGAGACCGGGGCA
TTTCAGTTCTATGGACCCTCTTCCGGCTTCTGCTTCATCCACCGGGTCTA
CCAACGCATCAAGCAAGGCTCGTCTAGTGAGCCGCTGCTTGCTCGACGGA
GCTGCTCCATTCCAGATGCTATCCACCGATTTGGTCTGGAGCGCTTCATG
TTTGCCCGGCCAGGAGATTCGGATCCGCGGCGGACTCATTTTCCATCTCA
GATGTTCCTCCCCAGGGAGTTGGGGGATCAGTTCATTGAGGCCTATTTCC
GCATTATGCACCCACAGATACCCATCCTCATAAAGTCCGAGATTGACGAT
GCTTGGAACCAAATGTGGGAGTCTCCTGTACGCGACCACAGCGTTAAAAA
TCAGGACATCCTATTCATGGTGCTGGCTATCGGCGCTCGGGTCGCCAACC
TGAAGGGGAAGCAACCCGAAAGCAGTGTCGCGGCTTGGGCCGATTACTTT
TCCAGTCGAGTATCTGAGGGGCCCATCTTTCTGCAGGAACCGAGTATCAG
AGGTGTACACTTGATGCTGCTGAAGCTGATGCGACAAAACGATGCTTATC
TTTACCTGGGTCACGCCACTCGCACCTGTCTCGTACTAGGTTTGCACCGG
GCTCAGGTCACCGATGGCCGCGATCCCACCGTACACCGGCTGCGTTTGAC
CTTTTGGACGACGTTCTTTTGCGAGCGCATATCTTCTCTGTACATGGGCC
GTCCGTCGAGCCTTTCTGACCGACAAATTGACACAGCCTATCCCGAGGAC
CTGCCGCCGAATCCCTATGACAGCACTTGTGCGCCCATGCAAGAATGCGC
ATTCATCCGAGCCATGGGCGAGATCGCCAAGCTGGCGGATCGCATCTCTA
TCGAGATATATTCGCCGGCCAGCATTAAAAACCCTACGGACCTGGACAAG
CTCAACCAAATCAGCGTTGAATGCGACCACGCCCTCCAAGCTGTCACCCC
GACACTACCAAGTTACCTGCACTTCTTCGATGACAGCGTTCCAATTGGCG
AGCCCTGGCAGGAGATCCAACGCCTGAGTCTTGGATTCTGCTACTACGTC
GTCCGGATGCTCCTCTCCCGCCCGGCACTGGTGCTTACCACATTTTTCTC
CTCGGTACAAGAAGCCCAGATCGCCACTGGCTGCACTGAGCTCCAATCTT
TCATCAATTCATCGACTTCCGCAGCGCGGAATTTGATCCACCTCGCTCAT
GACGTCTATTTCCGTCGTTTCCCAGATATACGCTATGACGGAGCTCTAGC
TTCGTTCCTTCTGTCTGCGTCACTGACTCTCTTATATGATGTGCTCAATC
TAGGAACTGATCCAGACCGAGCTAGGCAGACATTCACAGTCGTGGAAAAG
GCGATAAAGTGCCTCGATGAGATAGAGCATACGGGGTACACGTCGGGCAA
GGCGTTGAGCCTGGACCTGATGAGAGTGGCCAAGCAAGCGGTGCAAGCGG
CAGATCCGGTGGTGGACACTAATCAGGTCTTGATGGATGCGTTCCCGTGG
TTAGAGTATGTTTCCCCCTCTTGTTGTCAGACTATGCTGACTGAGTAGAT
GTCGGCCCGGCCCAATGACATTCGTCGGGTTGCCAACTTCGTCTCTGCCC
AACCCAGCCCGACTGACTCCCCGTCCACGGCTCCGCCAGCGGGAATGACG
CCTCCTCCCCGCGAGCGGGTCCCTCGGGCCTGTGAACACTGCCGGGCCCG
CAAGATCAAATGCAATGGCCAGCAGCCGTGCAATGCCTGCGCGCGCCATC
CAGAGCGATGTCTCTACCGGACAGGAAGCATTCGCCAGAGGAAGAACCGT
CGCACCAAGGAAGCCCCGCGACCACCAGCTACCTTACTCCCTCTCCCGAC
CACCGACTCGCCGACTACTCCAAGCGACTGGTCCCACACCAGTTTAAGCG
ATGGCCCGGCGCAGTATAAGCGACACCATGAGCTCCGTGCTGGCATCGGC
GTACAGAACCCGGAGACCGGGGCATTTCAGTTCTATGGACCCTCTTCCGG
CTTCTGCTTCATCCACCGGGTCTACCAACGCATCAAGCAAGGCTCGTCTA
GTGAGCCGCTGCTTGCTCGACGGAGCTGCTCCATTCCAGATGCTATCCAC
CGATTTGGTCTGGAGCGCTTCATGTTTGCCCGGCCAGGAGATTCGGATCC
GCGGCGGACTCATTTTCCATCTCAGATGTTCCTCCCCAGGGAGTTGGGGG
ATCAGTTCATTGAGGCCTATTTCCGCATTATGCACCCACAGATACCCATC
CTCATAAAGTCCGAGATTGACGATGCTTGGAACCAAATGTGGGAGTCTCC
TGTACGCGACCACAGCGTTAAAAATCAGGACATCCTATTCATGGTGCTGG
CTATCGGCGCTCGGGTCGCCAACCTGAAGGGGAAGCAACCCGAAAGCAGT
GTCGCGGCTTGGGCCGATTACTTTTCCAGTCGAGTATCTGAGGGGCCCAT
CTTTCTGCAGGAACCGAGTATCAGAGGTGTACACTTGATGCTGCTGAAGC
TGATGCGACAAAACGATGCTTATCTTTACCTGGGTCACGCCACTCGCACC
TGTCTCGTACTAGGTTTGCACCGGGCTCAGGTCACCGATGGCCGCGATCC
CACCGTACACCGGCTGCGTTTGACCTTTTGGACGACGTTCTTTTGCGAGC
GCATATCTTCTCTGTACATGGGCCGTCCGTCGAGCCTTTCTGACCGACAA
ATTGACACAGCCTATCCCGAGGACCTGCCGCCGAATCCCTATGACAGCAC
TTGTGCGCCCATGCAAGAATGCGCATTCATCCGAGCCATGGGCGAGATCG
CCAAGCTGGCGGATCGCATCTCTATCGAGATATATTCGCCGGCCAGCATT
AAAAACCCTACGGACCTGGACAAGCTCAACCAAATCAGCGTTGAATGCGA
CCACGCCCTCCAAGCTGTCACCCCGACACTACCAAGTTACCTGCACTTCT
TCGATGACAGCGTTCCAATTGGCGAGCCCTGGCAGGAGATCCAACGCCTG
AGTCTTGGATTCTGCTACTACGTCGTCCGGATGCTCCTCTCCCGCCCGGC
ACTGGTGCTTACCACATTTTTCTCCTCGGTACAAGAAGCCCAGATCGCCA
CTGGCTGCACTGAGCTCCAATCTTTCATCAATTCATCGACTTCCGCAGCG
CGGAATTTGATCCACCTCGCTCATGACGTCTATTTCCGTCGTTTCCCAGA
TATACGCTATGACGGAGCTCTAGCTTCGTTCCTTCTGTCTGCGTCACTGA
CTCTCTTATATGATGTGCTCAATCTAGGAACTGATCCAGACCGAGCTAGG
CAGACATTCACAGTCGTGGAAAAGGCGATAAAGTGCCTCGATGAGATAGA
GCATACGGGGTACACGTCGGGCAAGGCGTTGAGCCTGGACCTGATGAGAG
TGGCCAAGCAAGCGGTGCAAGCGGCAGATCCGGTGGTGGACACTAATCAG
GTCTTGATGGATGCGTTCCCGTGGTTAGAGTATGTTTCCCCCTCTTGTTG
TCAGACTATGCTGACTGAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_003320CBS51388_003320Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003320-T1.exon1CBS51388_003320-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_003320-T1.exon2CBS51388_003320-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_003320-T1.exon3CBS51388_003320-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003320-T1.cdsCBS51388_003320-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003320-T1CBS51388_003320-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_4.3
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefInterPro:IPR007219
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An04supercontigAn04:1121148..1123232 +
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