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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:1198282..1199155- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003349-T1 ID=CBS51388_003349-T1|Name=CBS51388_003349-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=874bp|location=Sequence derived from alignment at An04:1198282..1199155- (Aspergillus niger CBS 513.88)
ATGGCTGCTTCCCTCGTCCGCACCTCTGCCCGTACGGCCCTGCGCGCCGG
AGCTTCGGCTACTCCCAGAACTGCCGGCATGGCGGGCTTGACCTTTGCCC
GCGGCAAGGCTACTCTCCCTGACCTGTCCTGTATGCATCCAGCTGCCATT
CTCGAGACGCATAGATCTTGAAGTCACCGAACTGACTCCCTGTAGACGAC
TATGGCGCTCTCGAGCCCTCCATCTCCGGCAAGATCATGGAGCTTCACCA
CAAGAACCACCACCAGACCTACGTCAACAGCTACAACACTGCCATTGAGC
AGCTCCAGGAGGCCCAGCACAAGAACGACATTGCGGCCCAGATTGCCCTC
AAGCCCCTGATCAACTTCCACGGTGGTGGTCACCTGAACCACACCCTCTT
CTGGGAGAACCTTGCTCCCAAGAGCGCTGGCGGTGGTGAGCCCCCGTCCG
GTGCCCTGTCGACTGCCATCAACGACACCTTCGGCAGCCTGGAGGAGTTC
CAGAACAAGATGAACGCTGCTCTTGCTGCTATCCAGGGTAGCGGCTGGGC
CTGGCTCGTCAAGGACAAGCAGACCGGTCACATTGGCATCAAGGCCTACG
CCGTAAGAATGCACCATGCATGCGAAGAAAGTATTTGAGTTGGCTAACGA
TTTCACAGAACCAGGACCCCGTTGTCGGTCAGTTCCAGCCCCTGCTGGGT
ATTGACGCCTGGGAGCACGCCTACTAGTAAGTGCACCTGACCCAACCCGT
TGGAATCATCAGGAGCTAATATTGTCTATCTAGCCTCCAATACCAGAACC
GCAAGGCCGAGTACTTCAAGGCCATCTGGGAGGTCATCAACTGGAAGGCC
GTGGAGAAGCGCTTCTCCGCCTAA back to topCoding sequence (CDS) from alignment at An04:1198282..1199155- >CBS51388_003349-T1 ID=CBS51388_003349-T1|Name=CBS51388_003349-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2784bp|location=Sequence derived from alignment at An04:1198282..1199155- (Aspergillus niger CBS 513.88)
CCTCCAATACCAGAACCGCAAGGCCGAGTACTTCAAGGCCATCTGGGAGG
TCATCAACTGGAAGGCCGTGGAGAAGCGCTTCTCCGCCTAAAACCAGGAC
CCCGTTGTCGGTCAGTTCCAGCCCCTGCTGGGTATTGACGCCTGGGAGCA
CGCCTACTAACGACTATGGCGCTCTCGAGCCCTCCATCTCCGGCAAGATC
ATGGAGCTTCACCACAAGAACCACCACCAGACCTACGTCAACAGCTACAA
CACTGCCATTGAGCAGCTCCAGGAGGCCCAGCACAAGAACGACATTGCGG
CCCAGATTGCCCTCAAGCCCCTGATCAACTTCCACGGTGGTGGTCACCTG
AACCACACCCTCTTCTGGGAGAACCTTGCTCCCAAGAGCGCTGGCGGTGG
TGAGCCCCCGTCCGGTGCCCTGTCGACTGCCATCAACGACACCTTCGGCA
GCCTGGAGGAGTTCCAGAACAAGATGAACGCTGCTCTTGCTGCTATCCAG
GGTAGCGGCTGGGCCTGGCTCGTCAAGGACAAGCAGACCGGTCACATTGG
CATCAAGGCCTACGCCATGGCTGCTTCCCTCGTCCGCACCTCTGCCCGTA
CGGCCCTGCGCGCCGGAGCTTCGGCTACTCCCAGAACTGCCGGCATGGCG
GGCTTGACCTTTGCCCGCGGCAAGGCTACTCTCCCTGACCTGTCCTCCTC
CAATACCAGAACCGCAAGGCCGAGTACTTCAAGGCCATCTGGGAGGTCAT
CAACTGGAAGGCCGTGGAGAAGCGCTTCTCCGCCTAAAACCAGGACCCCG
TTGTCGGTCAGTTCCAGCCCCTGCTGGGTATTGACGCCTGGGAGCACGCC
TACTAACGACTATGGCGCTCTCGAGCCCTCCATCTCCGGCAAGATCATGG
AGCTTCACCACAAGAACCACCACCAGACCTACGTCAACAGCTACAACACT
GCCATTGAGCAGCTCCAGGAGGCCCAGCACAAGAACGACATTGCGGCCCA
GATTGCCCTCAAGCCCCTGATCAACTTCCACGGTGGTGGTCACCTGAACC
ACACCCTCTTCTGGGAGAACCTTGCTCCCAAGAGCGCTGGCGGTGGTGAG
CCCCCGTCCGGTGCCCTGTCGACTGCCATCAACGACACCTTCGGCAGCCT
GGAGGAGTTCCAGAACAAGATGAACGCTGCTCTTGCTGCTATCCAGGGTA
GCGGCTGGGCCTGGCTCGTCAAGGACAAGCAGACCGGTCACATTGGCATC
AAGGCCTACGCCATGGCTGCTTCCCTCGTCCGCACCTCTGCCCGTACGGC
CCTGCGCGCCGGAGCTTCGGCTACTCCCAGAACTGCCGGCATGGCGGGCT
TGACCTTTGCCCGCGGCAAGGCTACTCTCCCTGACCTGTCCTCCTCCAAT
ACCAGAACCGCAAGGCCGAGTACTTCAAGGCCATCTGGGAGGTCATCAAC
TGGAAGGCCGTGGAGAAGCGCTTCTCCGCCTAAAACCAGGACCCCGTTGT
CGGTCAGTTCCAGCCCCTGCTGGGTATTGACGCCTGGGAGCACGCCTACT
AACGACTATGGCGCTCTCGAGCCCTCCATCTCCGGCAAGATCATGGAGCT
TCACCACAAGAACCACCACCAGACCTACGTCAACAGCTACAACACTGCCA
TTGAGCAGCTCCAGGAGGCCCAGCACAAGAACGACATTGCGGCCCAGATT
GCCCTCAAGCCCCTGATCAACTTCCACGGTGGTGGTCACCTGAACCACAC
CCTCTTCTGGGAGAACCTTGCTCCCAAGAGCGCTGGCGGTGGTGAGCCCC
CGTCCGGTGCCCTGTCGACTGCCATCAACGACACCTTCGGCAGCCTGGAG
GAGTTCCAGAACAAGATGAACGCTGCTCTTGCTGCTATCCAGGGTAGCGG
CTGGGCCTGGCTCGTCAAGGACAAGCAGACCGGTCACATTGGCATCAAGG
CCTACGCCATGGCTGCTTCCCTCGTCCGCACCTCTGCCCGTACGGCCCTG
CGCGCCGGAGCTTCGGCTACTCCCAGAACTGCCGGCATGGCGGGCTTGAC
CTTTGCCCGCGGCAAGGCTACTCTCCCTGACCTGTCCTCCTCCAATACCA
GAACCGCAAGGCCGAGTACTTCAAGGCCATCTGGGAGGTCATCAACTGGA
AGGCCGTGGAGAAGCGCTTCTCCGCCTAAAACCAGGACCCCGTTGTCGGT
CAGTTCCAGCCCCTGCTGGGTATTGACGCCTGGGAGCACGCCTACTAACG
ACTATGGCGCTCTCGAGCCCTCCATCTCCGGCAAGATCATGGAGCTTCAC
CACAAGAACCACCACCAGACCTACGTCAACAGCTACAACACTGCCATTGA
GCAGCTCCAGGAGGCCCAGCACAAGAACGACATTGCGGCCCAGATTGCCC
TCAAGCCCCTGATCAACTTCCACGGTGGTGGTCACCTGAACCACACCCTC
TTCTGGGAGAACCTTGCTCCCAAGAGCGCTGGCGGTGGTGAGCCCCCGTC
CGGTGCCCTGTCGACTGCCATCAACGACACCTTCGGCAGCCTGGAGGAGT
TCCAGAACAAGATGAACGCTGCTCTTGCTGCTATCCAGGGTAGCGGCTGG
GCCTGGCTCGTCAAGGACAAGCAGACCGGTCACATTGGCATCAAGGCCTA
CGCCATGGCTGCTTCCCTCGTCCGCACCTCTGCCCGTACGGCCCTGCGCG
CCGGAGCTTCGGCTACTCCCAGAACTGCCGGCATGGCGGGCTTGACCTTT
GCCCGCGGCAAGGCTACTCTCCCTGACCTGTCCT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046872 | metal ion binding |
| GO:0004784 | superoxide dismutase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006801 | superoxide metabolic process |
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR019833 |
| DBxref | InterPro:IPR019831 |
| DBxref | InterPro:IPR036314 |
| DBxref | InterPro:IPR019832 |
| DBxref | InterPro:IPR036324 |
| DBxref | InterPro:IPR001189 |
| DBxref | PFAM:PF00081 |
| DBxref | PFAM:PF02777 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:1198282..1199155 - |
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