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CBS51388_003352-T1, CBS51388_003352-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_003352-T1
Unique NameCBS51388_003352-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An04:1209871..1211048-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_003352-T1 ID=CBS51388_003352-T1|Name=CBS51388_003352-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1178bp|location=Sequence derived from alignment at An04:1209871..1211048- (Aspergillus niger CBS 513.88)
ATGCTGTACAGAACCACTGCTGCCCGCTCTGTCCTCAGGGCTATCTCGAG
CTCCAATGCCTCGGTCGCCCGCTCGGCCCTGTCCAACAATGTCTTCAAGG
CTCCCTTGACCTCTTCCGCTCGTTTTCCCGCTCGCCCGACCACCTCCCCC
AGCCTCGCTCTGGCTGCTCGCAAGCCCGTCACCACCGCTCTTGTCCGCTA
TGCCTCCACGTCGGCTAAGGTGAGATTGAACTGAAGCAAACTGAGTACTA
TAATTGAGTCAATTGCTGATCAAAGAACCACAGGAAGGCGAGGAGCCCGA
CATGATGGCCGGTATCAAGACCGAGGCTGTATGTGTTTTCCATTCTTCCC
CAGATATCGCTTCCTCTGCGGGGCAATCTAGCCTCTCGGCGGCACATCTG
GGACCCAATGCGCTAATGAGTCTCTTTCCGATGTATAGAAAGTCATCAAG
GACACCTTCAGCCTGGAGGCCGTCCCCAAGGAGGCCCTCTACCTCGGAAT
GGCCGGTGTCATCCCCTACGTCGCTACTTCCCTGCAGACCGTCGCCCTCG
CCTATGAGGTCAAGACCGCTGCTTTGGCCGGTGATGGTCTGATCTTCTCC
GGCCAGAGCGCCGAGTTGATGCTGCACATGATCGAGCCCATCCAGGTCGG
CTACGGTGCTGTTGTAAGTAACCCATGAGCCATCTTGAAACCCTTCAACA
ATCCCCCCTGCCCAAGGAGAAACCCTCAAAAGCTAATCAACTTAAACAAT
AACAGATCCTCTCCTTCCTCGGTGCCATCCACTGGGGTCTCGAGTGGGCC
GGCTACGGCGGCAAGTACGGCTACAAGCGCTACGCTGCCGGTGTTATCGC
CCCTGCCGTCGCCTGGCCCACCCTGCTGCTCCCCGTTGAGTATGCCCTGA
TCTCTCAGTTCCTTGCCTTCACCTTCCTGTACTACAACGACGCTCGTGCC
GCTGCTTCCGGCCGCGCCCCCGCCTGGTACGGCATGTACCGCTTCGTCCT
CACCTTCATCGTCGGTGCTAGCATTGTTGCCAGCTTGATCGGCCGTGAGC
AGATCGCTGGTACCCTCAGCACTGAGCACACCATCAAGGACAAGATCAAC
GCTCTGATCTTCCTGCAGAAGAAGGAGAAGGAGGAGGTTGAGGCCCGTCG
TCGTGCTGAGCTCGAGGATGCTGAGTAA
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Coding sequence (CDS) from alignment at An04:1209871..1211048-

>CBS51388_003352-T1 ID=CBS51388_003352-T1|Name=CBS51388_003352-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3648bp|location=Sequence derived from alignment at An04:1209871..1211048- (Aspergillus niger CBS 513.88)
ATCCTCTCCTTCCTCGGTGCCATCCACTGGGGTCTCGAGTGGGCCGGCTA
CGGCGGCAAGTACGGCTACAAGCGCTACGCTGCCGGTGTTATCGCCCCTG
CCGTCGCCTGGCCCACCCTGCTGCTCCCCGTTGAGTATGCCCTGATCTCT
CAGTTCCTTGCCTTCACCTTCCTGTACTACAACGACGCTCGTGCCGCTGC
TTCCGGCCGCGCCCCCGCCTGGTACGGCATGTACCGCTTCGTCCTCACCT
TCATCGTCGGTGCTAGCATTGTTGCCAGCTTGATCGGCCGTGAGCAGATC
GCTGGTACCCTCAGCACTGAGCACACCATCAAGGACAAGATCAACGCTCT
GATCTTCCTGCAGAAGAAGGAGAAGGAGGAGGTTGAGGCCCGTCGTCGTG
CTGAGCTCGAGGATGCTGAGTAAAAAGTCATCAAGGACACCTTCAGCCTG
GAGGCCGTCCCCAAGGAGGCCCTCTACCTCGGAATGGCCGGTGTCATCCC
CTACGTCGCTACTTCCCTGCAGACCGTCGCCCTCGCCTATGAGGTCAAGA
CCGCTGCTTTGGCCGGTGATGGTCTGATCTTCTCCGGCCAGAGCGCCGAG
TTGATGCTGCACATGATCGAGCCCATCCAGGTCGGCTACGGTGCTGTTGA
AGGCGAGGAGCCCGACATGATGGCCGGTATCAAGACCGAGGCTATGCTGT
ACAGAACCACTGCTGCCCGCTCTGTCCTCAGGGCTATCTCGAGCTCCAAT
GCCTCGGTCGCCCGCTCGGCCCTGTCCAACAATGTCTTCAAGGCTCCCTT
GACCTCTTCCGCTCGTTTTCCCGCTCGCCCGACCACCTCCCCCAGCCTCG
CTCTGGCTGCTCGCAAGCCCGTCACCACCGCTCTTGTCCGCTATGCCTCC
ACGTCGGCTAAGATCCTCTCCTTCCTCGGTGCCATCCACTGGGGTCTCGA
GTGGGCCGGCTACGGCGGCAAGTACGGCTACAAGCGCTACGCTGCCGGTG
TTATCGCCCCTGCCGTCGCCTGGCCCACCCTGCTGCTCCCCGTTGAGTAT
GCCCTGATCTCTCAGTTCCTTGCCTTCACCTTCCTGTACTACAACGACGC
TCGTGCCGCTGCTTCCGGCCGCGCCCCCGCCTGGTACGGCATGTACCGCT
TCGTCCTCACCTTCATCGTCGGTGCTAGCATTGTTGCCAGCTTGATCGGC
CGTGAGCAGATCGCTGGTACCCTCAGCACTGAGCACACCATCAAGGACAA
GATCAACGCTCTGATCTTCCTGCAGAAGAAGGAGAAGGAGGAGGTTGAGG
CCCGTCGTCGTGCTGAGCTCGAGGATGCTGAGTAAAAAGTCATCAAGGAC
ACCTTCAGCCTGGAGGCCGTCCCCAAGGAGGCCCTCTACCTCGGAATGGC
CGGTGTCATCCCCTACGTCGCTACTTCCCTGCAGACCGTCGCCCTCGCCT
ATGAGGTCAAGACCGCTGCTTTGGCCGGTGATGGTCTGATCTTCTCCGGC
CAGAGCGCCGAGTTGATGCTGCACATGATCGAGCCCATCCAGGTCGGCTA
CGGTGCTGTTGAAGGCGAGGAGCCCGACATGATGGCCGGTATCAAGACCG
AGGCTATGCTGTACAGAACCACTGCTGCCCGCTCTGTCCTCAGGGCTATC
TCGAGCTCCAATGCCTCGGTCGCCCGCTCGGCCCTGTCCAACAATGTCTT
CAAGGCTCCCTTGACCTCTTCCGCTCGTTTTCCCGCTCGCCCGACCACCT
CCCCCAGCCTCGCTCTGGCTGCTCGCAAGCCCGTCACCACCGCTCTTGTC
CGCTATGCCTCCACGTCGGCTAAGATCCTCTCCTTCCTCGGTGCCATCCA
CTGGGGTCTCGAGTGGGCCGGCTACGGCGGCAAGTACGGCTACAAGCGCT
ACGCTGCCGGTGTTATCGCCCCTGCCGTCGCCTGGCCCACCCTGCTGCTC
CCCGTTGAGTATGCCCTGATCTCTCAGTTCCTTGCCTTCACCTTCCTGTA
CTACAACGACGCTCGTGCCGCTGCTTCCGGCCGCGCCCCCGCCTGGTACG
GCATGTACCGCTTCGTCCTCACCTTCATCGTCGGTGCTAGCATTGTTGCC
AGCTTGATCGGCCGTGAGCAGATCGCTGGTACCCTCAGCACTGAGCACAC
CATCAAGGACAAGATCAACGCTCTGATCTTCCTGCAGAAGAAGGAGAAGG
AGGAGGTTGAGGCCCGTCGTCGTGCTGAGCTCGAGGATGCTGAGTAAAAA
GTCATCAAGGACACCTTCAGCCTGGAGGCCGTCCCCAAGGAGGCCCTCTA
CCTCGGAATGGCCGGTGTCATCCCCTACGTCGCTACTTCCCTGCAGACCG
TCGCCCTCGCCTATGAGGTCAAGACCGCTGCTTTGGCCGGTGATGGTCTG
ATCTTCTCCGGCCAGAGCGCCGAGTTGATGCTGCACATGATCGAGCCCAT
CCAGGTCGGCTACGGTGCTGTTGAAGGCGAGGAGCCCGACATGATGGCCG
GTATCAAGACCGAGGCTATGCTGTACAGAACCACTGCTGCCCGCTCTGTC
CTCAGGGCTATCTCGAGCTCCAATGCCTCGGTCGCCCGCTCGGCCCTGTC
CAACAATGTCTTCAAGGCTCCCTTGACCTCTTCCGCTCGTTTTCCCGCTC
GCCCGACCACCTCCCCCAGCCTCGCTCTGGCTGCTCGCAAGCCCGTCACC
ACCGCTCTTGTCCGCTATGCCTCCACGTCGGCTAAGATCCTCTCCTTCCT
CGGTGCCATCCACTGGGGTCTCGAGTGGGCCGGCTACGGCGGCAAGTACG
GCTACAAGCGCTACGCTGCCGGTGTTATCGCCCCTGCCGTCGCCTGGCCC
ACCCTGCTGCTCCCCGTTGAGTATGCCCTGATCTCTCAGTTCCTTGCCTT
CACCTTCCTGTACTACAACGACGCTCGTGCCGCTGCTTCCGGCCGCGCCC
CCGCCTGGTACGGCATGTACCGCTTCGTCCTCACCTTCATCGTCGGTGCT
AGCATTGTTGCCAGCTTGATCGGCCGTGAGCAGATCGCTGGTACCCTCAG
CACTGAGCACACCATCAAGGACAAGATCAACGCTCTGATCTTCCTGCAGA
AGAAGGAGAAGGAGGAGGTTGAGGCCCGTCGTCGTGCTGAGCTCGAGGAT
GCTGAGTAAAAAGTCATCAAGGACACCTTCAGCCTGGAGGCCGTCCCCAA
GGAGGCCCTCTACCTCGGAATGGCCGGTGTCATCCCCTACGTCGCTACTT
CCCTGCAGACCGTCGCCCTCGCCTATGAGGTCAAGACCGCTGCTTTGGCC
GGTGATGGTCTGATCTTCTCCGGCCAGAGCGCCGAGTTGATGCTGCACAT
GATCGAGCCCATCCAGGTCGGCTACGGTGCTGTTGAAGGCGAGGAGCCCG
ACATGATGGCCGGTATCAAGACCGAGGCTATGCTGTACAGAACCACTGCT
GCCCGCTCTGTCCTCAGGGCTATCTCGAGCTCCAATGCCTCGGTCGCCCG
CTCGGCCCTGTCCAACAATGTCTTCAAGGCTCCCTTGACCTCTTCCGCTC
GTTTTCCCGCTCGCCCGACCACCTCCCCCAGCCTCGCTCTGGCTGCTCGC
AAGCCCGTCACCACCGCTCTTGTCCGCTATGCCTCCACGTCGGCTAAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_003352CBS51388_003352Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003352-T1CBS51388_003352-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003352-T1.cdsCBS51388_003352-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003352-T1.exon4CBS51388_003352-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_003352-T1.exon3CBS51388_003352-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_003352-T1.exon2CBS51388_003352-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_003352-T1.exon1CBS51388_003352-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR021836
DBxrefPFAM:PF11911
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An04supercontigAn04:1209871..1211048 -
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