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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:1339290..1341509- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003386-T1 ID=CBS51388_003386-T1|Name=CBS51388_003386-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2220bp|location=Sequence derived from alignment at An04:1339290..1341509- (Aspergillus niger CBS 513.88)
ATGTTGTTTTCAAAATCCGGTCGGACCATCTTTCCACTGCTACCACCCTA
TGGGGTTCAAGATCCCAACGGCGTTCAAGGTCGAGTCATCCCTGTACACC
CTGATGGCTCGACACCTTACCTAGGCCTGCGGGCGCGCCTTTCCCAAGTA
TGGCTTAACCGCTGGACCGTTTTGCTGCTGCTAGTCCTTGCCCGAGTGCT
GATGGCTGCCTCGAGCATAAAAACGGACATGAATCGAGCCAAAAGCGAGG
CCCTTTCGGCATGCACAAGCGTGGAATCTATGGGCGATGCCATGGTCTCT
ATGCCCCATTACCTGGCGGAAGGGGTCAATGAGCTCACAGCAGATGGTGT
CAATGCGGCAATTGATGGCCTAAAAATGCTCCTCATGCTTACCTTGACTG
GCGTAGAGGAGTTGGTGATTTTCTTCGTCAAAGTGATGTACCAGACATAT
CTGTGCTTGTTCACGCTCGTCGTACATGGTGTGGTTGATGTTGGACTCAG
CTTAATCGAAGATGTAACAGACGTTCTGAATTCCACGGTCAAGACTGTGG
CGAAGGATATTGCTAAGGTCACCGAGACGTTTGAGGACGACTACAATACT
CTGATATCGAAGATAAACGGGGTTGCCAGCTTATTCGGAGGATCAGTTCC
GACCCTGAATATCAGCAGCGAAATCGACAAACTGGAGAATGTACAGCTGT
CTTCGTCCATCGATAAGGATCTCCAGAAGATTAACGACTCCATCCCAAAT
TTCAACGAAGTCATGAACTTCACTGAGAATGTGATTCGTTTTCCCTTCGA
TGAAGTCAAAAAACTGGTCAACGAGTCACTAGGCAATTACACTTTTAATG
CCTCCGCACTCCCTGTCCCTGCGAAGAAGACACTGACGTTTTGCGATAAA
AACGATGGGATCAACTCATTTTTTGCCGGAGCAACTGATATAATCCTAAC
CGCCCGCAAGATATTTATCGCCATTTTGGTCGTCGCTGCCATCATCGCTT
GCGTTCCCATGGCCTGGCAGGAGATTCGGCGCTGGCACACGATGAAGGAG
CGCTCCCAACTTGTTCGCAAGGAAGCTCATGATCCCATGGACGTCGTTTA
CATAGTCTCCAGACCTCACACGGCCGCAATAGGTATCAAAGCCGCCAGTC
GATTCAGCAACAGCCGCAGACAGATTCTTGTGCGCTGGGTGATCGCATAT
GCGACCTCCCCCGCAGCCTTATTCGTCCTCCTTCTCGCACTGGCTGGGCT
TCTCTCATGCCTCTGCCAGTTCATCCTTCTCAGCGCCGTCAAGAGGACAG
TGCCGGAGCTCTCCAACGAAGTAGGCGACTTTGCCGAAGAGGTTGTTGAT
GTCTTACAAAATACATCTGCTCAATGGGCCAACGATGCCAACAAAGTCAT
CCAAAACGTTGACGATGAGCTCAACGATCACGTGTTTGGTTGGGTCAACA
CCAGCACCGGCGCTTTGAATGACACGCTGAATACCTTTGTCAACAAAACA
ATCGGGGTCCTCAACGACACCTTTGGTGGAACCCTACTCTATGAACCTCT
TCTCGACGTCTTTGACTGCTTGGTTGGCCTCAAAGTTGAAAGCGTCCAGA
AAGGCCTTACTTGGGTTTCCGATCATGCCCACATAGACTTCCCCCTCCTC
CCCAACGACACCTTTTCGCGCGGTGCAGAAGGGAGTCTCAACAGTTCCGA
TGCATCAGAGAGCTTCCTCGCCGACGCCGGTGACGAGACATCCAACAAGA
TCACCGAAGTTGTGTACAAGGTCATCAGCGCTCTCGAGAAGGCTCTCCTA
ATAGAAGTCATCATTGCTTCATGCATCCTTCTGGTCTGGGTCATAAATGC
CATGTTTGGCATCATCCGCGCCCTAACACTCTTCTGGGGCCGGGACAAGA
ACCGTGGTGAGGGCGGACCTGCTCCTCCCAATTCACGACCGAACCCAGGC
TCTGGACCGGACTCGCATGGTTTCATCGATGTGCCCCTAACTTCTCTTCC
GAGTCACCGTGACGCCGATGAGACTGCTGCGCGCTCGCAGCCGGCACCCC
GATATGAAGTTGCGACCAGCCAGGGAAGTTCTGCCGCCGTGGTGAGCAGC
GAATTGGAGTATCCGGACGAGAAAGTCGGGTTCGCAGGCCAGCGCAATGC
TCTTCGAGTGGATGGGGTGTCGGATCTACGCGGGAGCAGCTATGTGGAGT
ATGGAATAGAGAAGTATTGA back to topCoding sequence (CDS) from alignment at An04:1339290..1341509- >CBS51388_003386-T1 ID=CBS51388_003386-T1|Name=CBS51388_003386-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2220bp|location=Sequence derived from alignment at An04:1339290..1341509- (Aspergillus niger CBS 513.88)
ATGTTGTTTTCAAAATCCGGTCGGACCATCTTTCCACTGCTACCACCCTA
TGGGGTTCAAGATCCCAACGGCGTTCAAGGTCGAGTCATCCCTGTACACC
CTGATGGCTCGACACCTTACCTAGGCCTGCGGGCGCGCCTTTCCCAAGTA
TGGCTTAACCGCTGGACCGTTTTGCTGCTGCTAGTCCTTGCCCGAGTGCT
GATGGCTGCCTCGAGCATAAAAACGGACATGAATCGAGCCAAAAGCGAGG
CCCTTTCGGCATGCACAAGCGTGGAATCTATGGGCGATGCCATGGTCTCT
ATGCCCCATTACCTGGCGGAAGGGGTCAATGAGCTCACAGCAGATGGTGT
CAATGCGGCAATTGATGGCCTAAAAATGCTCCTCATGCTTACCTTGACTG
GCGTAGAGGAGTTGGTGATTTTCTTCGTCAAAGTGATGTACCAGACATAT
CTGTGCTTGTTCACGCTCGTCGTACATGGTGTGGTTGATGTTGGACTCAG
CTTAATCGAAGATGTAACAGACGTTCTGAATTCCACGGTCAAGACTGTGG
CGAAGGATATTGCTAAGGTCACCGAGACGTTTGAGGACGACTACAATACT
CTGATATCGAAGATAAACGGGGTTGCCAGCTTATTCGGAGGATCAGTTCC
GACCCTGAATATCAGCAGCGAAATCGACAAACTGGAGAATGTACAGCTGT
CTTCGTCCATCGATAAGGATCTCCAGAAGATTAACGACTCCATCCCAAAT
TTCAACGAAGTCATGAACTTCACTGAGAATGTGATTCGTTTTCCCTTCGA
TGAAGTCAAAAAACTGGTCAACGAGTCACTAGGCAATTACACTTTTAATG
CCTCCGCACTCCCTGTCCCTGCGAAGAAGACACTGACGTTTTGCGATAAA
AACGATGGGATCAACTCATTTTTTGCCGGAGCAACTGATATAATCCTAAC
CGCCCGCAAGATATTTATCGCCATTTTGGTCGTCGCTGCCATCATCGCTT
GCGTTCCCATGGCCTGGCAGGAGATTCGGCGCTGGCACACGATGAAGGAG
CGCTCCCAACTTGTTCGCAAGGAAGCTCATGATCCCATGGACGTCGTTTA
CATAGTCTCCAGACCTCACACGGCCGCAATAGGTATCAAAGCCGCCAGTC
GATTCAGCAACAGCCGCAGACAGATTCTTGTGCGCTGGGTGATCGCATAT
GCGACCTCCCCCGCAGCCTTATTCGTCCTCCTTCTCGCACTGGCTGGGCT
TCTCTCATGCCTCTGCCAGTTCATCCTTCTCAGCGCCGTCAAGAGGACAG
TGCCGGAGCTCTCCAACGAAGTAGGCGACTTTGCCGAAGAGGTTGTTGAT
GTCTTACAAAATACATCTGCTCAATGGGCCAACGATGCCAACAAAGTCAT
CCAAAACGTTGACGATGAGCTCAACGATCACGTGTTTGGTTGGGTCAACA
CCAGCACCGGCGCTTTGAATGACACGCTGAATACCTTTGTCAACAAAACA
ATCGGGGTCCTCAACGACACCTTTGGTGGAACCCTACTCTATGAACCTCT
TCTCGACGTCTTTGACTGCTTGGTTGGCCTCAAAGTTGAAAGCGTCCAGA
AAGGCCTTACTTGGGTTTCCGATCATGCCCACATAGACTTCCCCCTCCTC
CCCAACGACACCTTTTCGCGCGGTGCAGAAGGGAGTCTCAACAGTTCCGA
TGCATCAGAGAGCTTCCTCGCCGACGCCGGTGACGAGACATCCAACAAGA
TCACCGAAGTTGTGTACAAGGTCATCAGCGCTCTCGAGAAGGCTCTCCTA
ATAGAAGTCATCATTGCTTCATGCATCCTTCTGGTCTGGGTCATAAATGC
CATGTTTGGCATCATCCGCGCCCTAACACTCTTCTGGGGCCGGGACAAGA
ACCGTGGTGAGGGCGGACCTGCTCCTCCCAATTCACGACCGAACCCAGGC
TCTGGACCGGACTCGCATGGTTTCATCGATGTGCCCCTAACTTCTCTTCC
GAGTCACCGTGACGCCGATGAGACTGCTGCGCGCTCGCAGCCGGCACCCC
GATATGAAGTTGCGACCAGCCAGGGAAGTTCTGCCGCCGTGGTGAGCAGC
GAATTGGAGTATCCGGACGAGAAAGTCGGGTTCGCAGGCCAGCGCAATGC
TCTTCGAGTGGATGGGGTGTCGGATCTACGCGGGAGCAGCTATGTGGAGT
ATGGAATAGAGAAGTATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_4.4 |
| Note | BUSCO:EOG09261VUC |
| Product | plasma membrane fusion protein prm1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:1339290..1341509 - |
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