|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:1397886..1398650+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003403-T1 ID=CBS51388_003403-T1|Name=CBS51388_003403-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=765bp|location=Sequence derived from alignment at An04:1397886..1398650+ (Aspergillus niger CBS 513.88)
ATGAATCGGCTATTCGGTACGAAGAACACGGCACCCAAGCCAACGCTAGA
TGGGGCCATAACCAATGTACGTTTCCCCTTTTCCCTTCCAACCTTCGTCA
TTCATCATTGTTGCCCAACTCTCCGAATTCATCTCGTCCCTTATCCGCCT
GACCCCGCATGATTAACATTTCCCCGACAGGTGGAAACACGCATTTCCAG
CATTGACGTCAAGCTGGCGGCTCTCAACTCGGAACTATCTACCTATCAAA
CCAAGATCTCCAAGATGCGCGACGGGCCGGGAAAAACCGCGTTACGGCAG
AAAGCCCTCAAGGTTCTCCAGCGACGGAAACAGTACGAAGCGCAGCGGGA
TCAGCTGTCGCAGCAGTCATGGAATATGGAGCAGGCGGGCATGATGCAGG
ATAATCTGAAGAATGTGATGACGACGGTTGATGCTATGAAGACGACAACC
AAGACCCTCAAGAAGCAGTATGGTCAGATTGATATTGATAAGATTGAACG
GCTGCAGGATGAGATGGCGGATTTGATGGACGTGGGGAATGAAATCCAGG
AAAGTATATCGCGGGCGTATGACGTTCCCGAGGATGTCGATGAGGCGGAA
CTCGATGCGGAATTGGAGGCGCTAGGCGAGGAGACTATGATGGAGAGCTC
GATGGCTGATAGTGCTATGCCTAGCTTCCTGCAAGATGAGGTGGCGCCGC
CGCAGTTCATTGATGAGCCCCCAGAGCAGACTAAGGTTAAGGAGCCTGCT
AGTGGGTTGGGTTAG back to topCoding sequence (CDS) from alignment at An04:1397886..1398650+ >CBS51388_003403-T1 ID=CBS51388_003403-T1|Name=CBS51388_003403-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1302bp|location=Sequence derived from alignment at An04:1397886..1398650+ (Aspergillus niger CBS 513.88)
ATGAATCGGCTATTCGGTACGAAGAACACGGCACCCAAGCCAACGCTAGA
TGGGGCCATAACCAATGTGGAAACACGCATTTCCAGCATTGACGTCAAGC
TGGCGGCTCTCAACTCGGAACTATCTACCTATCAAACCAAGATCTCCAAG
ATGCGCGACGGGCCGGGAAAAACCGCGTTACGGCAGAAAGCCCTCAAGGT
TCTCCAGCGACGGAAACAGTACGAAGCGCAGCGGGATCAGCTGTCGCAGC
AGTCATGGAATATGGAGCAGGCGGGCATGATGCAGGATAATCTGAAGAAT
GTGATGACGACGGTTGATGCTATGAAGACGACAACCAAGACCCTCAAGAA
GCAGTATGGTCAGATTGATATTGATAAGATTGAACGGCTGCAGGATGAGA
TGGCGGATTTGATGGACGTGGGGAATGAAATCCAGGAAAGTATATCGCGG
GCGTATGACGTTCCCGAGGATGTCGATGAGGCGGAACTCGATGCGGAATT
GGAGGCGCTAGGCGAGGAGACTATGATGGAGAGCTCGATGGCTGATAGTG
CTATGCCTAGCTTCCTGCAAGATGAGGTGGCGCCGCCGCAGTTCATTGAT
GAGCCCCCAGAGCAGACTAAGGTTAAGGAGCCTGCTAGTGGGTTGGGTTA
GATGAATCGGCTATTCGGTACGAAGAACACGGCACCCAAGCCAACGCTAG
ATGGGGCCATAACCAATGTGGAAACACGCATTTCCAGCATTGACGTCAAG
CTGGCGGCTCTCAACTCGGAACTATCTACCTATCAAACCAAGATCTCCAA
GATGCGCGACGGGCCGGGAAAAACCGCGTTACGGCAGAAAGCCCTCAAGG
TTCTCCAGCGACGGAAACAGTACGAAGCGCAGCGGGATCAGCTGTCGCAG
CAGTCATGGAATATGGAGCAGGCGGGCATGATGCAGGATAATCTGAAGAA
TGTGATGACGACGGTTGATGCTATGAAGACGACAACCAAGACCCTCAAGA
AGCAGTATGGTCAGATTGATATTGATAAGATTGAACGGCTGCAGGATGAG
ATGGCGGATTTGATGGACGTGGGGAATGAAATCCAGGAAAGTATATCGCG
GGCGTATGACGTTCCCGAGGATGTCGATGAGGCGGAACTCGATGCGGAAT
TGGAGGCGCTAGGCGAGGAGACTATGATGGAGAGCTCGATGGCTGATAGT
GCTATGCCTAGCTTCCTGCAAGATGAGGTGGCGCCGCCGCAGTTCATTGA
TGAGCCCCCAGAGCAGACTAAGGTTAAGGAGCCTGCTAGTGGGTTGGGTT
AG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007034 | vacuolar transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264OXC |
| DBxref | InterPro:IPR005024 |
| DBxref | PFAM:PF03357 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:1397886..1398650 + |
|
