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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:1404231..1406901+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003405-T1 ID=CBS51388_003405-T1|Name=CBS51388_003405-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2671bp|location=Sequence derived from alignment at An04:1404231..1406901+ (Aspergillus niger CBS 513.88)
ATGGCTCCCAGCATACAACCCCCGAGCATCTTTGACGATTCCTCCCGTGG
TCCTACCAAGCCTTCCGTCCTGCGAGCAATCTGGTCATCCAAGGCCCACA
AACGGACTTCATCTGCAGATGATGTCCTCGCCCCTAGAGTCGTTGATAAA
GGCCAGCCTAGTGGCAGCCCATATGCGCCCCCAGTCGATGGACCTTACAA
CCCTGCGGAACAGCCACTGGCAGAAATAGCCCTCAACCGGGATACAGCAG
ACGTTAGTTCAACCCAGAGATCACCTGGAAAGCAAGGGAAACACACTCTA
CACAAGAAAACAAAAAGCGCCGTCTCACTGAAATCTCTCAAGAGCTATAT
GGAACGCAAGGACAAGTCGGATGAGACGCCAGATGACGAAGCAGCGAATC
TGAAGCCGAAGAAAGCAAAGTCGGCCAACAGTCTCACGGCTATCTTGAAA
CGATCCCAACGCGGAAGGAAAGGAGAAAACTCGAAGAGCACTCGGGACAA
AGAGAACCGCAGCCCATCGGACCCTGTCGATAGCATGCCCTCTCCAATGT
GGAACCACTACCCAACGCCGCCGTACTACAACCAACCTGAGGTTACCAGT
TCCCAGCACAAGCGTAGGACTCTACAGGAGGAGGTTTCTCTCTACACCCC
TAGGGAGTATGGACCCACTCTTCAGCGAAATTTCTATGATTACGATGGAC
CCTCTCTCAGAGCCCGCGGGGATCCAAAGCCACGTCCAAAATCGGACTAC
CTCGCGGGAAATCGCAAGGTGAAAGAACTGATGGATCCTATAGATGGCAT
GACGGCGAACCAGCTGGCTTCGGGTAACCAGCCAGAACCTGCCTCGCCCA
AGAAACACGGAAGGCCCAGGGCACTCTCACGCCCGGAATACCATCCCCCA
GCGGAATCCAGGCCCGAAGCAAGCCCGAAACGACTCTCTCGCGTCCAAGC
GGCAATATCAGCTTTCAATGCAAAAGAGCAGGAGGCTGAACTGCAGAAAC
GCTTGACCGGCAAGGAGCTTGAGAACGAGTTCGAAAAGCTACTGGTTAGT
AATCCCGAACTACTCTCGTCGAACACCCAGAGCCTAGACTAATGACGAGA
CAGGATGCTAGGAATATTCCTCATAACATGCGAGACAAGATGAGGTCTCT
GGATACCAACATAAAAGCAGACTTCATTATGAAGGATCGAGCCGAAAATA
CTGCGCCGCACAGCACTAGTGCTAGTGGTACGGATAGTACCGGTCGTCGG
GGGCGCAAGAAGGAGCCAAAGGAGGACCGCCATGGCCAAGACAGCAAAGG
ATCTCGCTCGCGATCCCGCAGTCGCGGCTTCTCATTCTCCAAAGGCAGCT
CTTCGCCTAAGAAGCAGCGCCCCGACAGCGGGAGTTTCTATAGGCGTCCC
AAATCCGCCGACTATTCACAGCCCACAGGATTCTCCAGGCTCGGAACCCC
GTCAGCTTCCACTACCTCACTCTCTGCCACAGCTTGTGATACTGCAGCTG
ACCCGTCGGACTTTGTGCATTATCTGAGAGAAATCCAGAAGCCAGAAATG
GTCGAGGTTGGGAAAATGCACAAGCTTCGCATCCTCCTCCGGAATGAAAC
TGTCAGCTGGGTTGATACGTTCATTGCGGACGGTGGTATGGATGAGGTGG
TGCAACTGCTTTACAGGATTATGAAGGTTGAATGGAGGTAAGTTATACGT
ATTCTCCGATTTGGGGAACCGGAGCTCATAAATTGGATAGGGAAGAGCAT
GAAGATACCCTGCTTCACGAAACCTTGTTATGCTTGAAAGCTCTTTGTAC
AACATCCATCGCTCTGCAGCATCTCACCAACATCGAGGGCGAGCTTTTCC
CCGCATTGCTGCGAATGCTATTTGACGAAGAGAAGAAGGGCCCAAGCGAG
TACACAACCCGTGGGATTATCATCAATCTCCTGTTTACTCAGCTCTCTGC
TGTATCATCCGACGAGATGGCTGCCAGCCGGGCTTCACGCATCTTATCCT
ACCTGCGCGACCCGTCTCCCCCGGAGGACAGTCAGCCTCTGAGTTTTATC
GCAAACATATATCAGTCACGCCCCTACCGAGTCTGGTGCAAGGAGGTTAC
CAATGTGACCAAGGAAGTTTTCTGGATCTTCCTGCATCATCTCAACGTGA
TCCCGATCTTGAAAGACGATAAACCGGGTGTGAGCTACCGAGAACGTCAT
TTCCCTGCCCCTAGGCCTCCAGTTCCCGCCGCTCCATATGTTGGTGGCGT
GGAATGGGATGCGACCAACTACTTGGCTGCGCACCTGGACCTCATGAATG
GCCTGGTGGCGTCGTTGCCAACGAGCGAAGAACGTAACCAGCTTCGAGAT
GAATTTCGAGCCTCGGGATTCGAGAAGGTCATGGGCGGCAGTTTGCGAAC
ATGCAAGGAGAAGTTTTATTCCTCCGTGCACGATTGCCTAAAGACATGGG
TTGCTGCAGCTGTAGCTGATGGGTGGCCATACACATCGGTCCGCGAAGGT
CCTCCGCGGCCGGAGCCTGGGTCGCCGAGCAAAACCGCGATCAAAGCAGC
AGCTGGAAGCCCCAGAAAGGGTGTCTTGGACGAACAGCCTCCCAAGCTGG
AACTTGCGCTGGATGTCCCTGCTGGTCGTGGCGGGGCCCAAGGCAACAGT
GGCCTTGGGAATTGGCTCTAG back to topCoding sequence (CDS) from alignment at An04:1404231..1406901+ >CBS51388_003405-T1 ID=CBS51388_003405-T1|Name=CBS51388_003405-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7677bp|location=Sequence derived from alignment at An04:1404231..1406901+ (Aspergillus niger CBS 513.88)
ATGGCTCCCAGCATACAACCCCCGAGCATCTTTGACGATTCCTCCCGTGG
TCCTACCAAGCCTTCCGTCCTGCGAGCAATCTGGTCATCCAAGGCCCACA
AACGGACTTCATCTGCAGATGATGTCCTCGCCCCTAGAGTCGTTGATAAA
GGCCAGCCTAGTGGCAGCCCATATGCGCCCCCAGTCGATGGACCTTACAA
CCCTGCGGAACAGCCACTGGCAGAAATAGCCCTCAACCGGGATACAGCAG
ACGTTAGTTCAACCCAGAGATCACCTGGAAAGCAAGGGAAACACACTCTA
CACAAGAAAACAAAAAGCGCCGTCTCACTGAAATCTCTCAAGAGCTATAT
GGAACGCAAGGACAAGTCGGATGAGACGCCAGATGACGAAGCAGCGAATC
TGAAGCCGAAGAAAGCAAAGTCGGCCAACAGTCTCACGGCTATCTTGAAA
CGATCCCAACGCGGAAGGAAAGGAGAAAACTCGAAGAGCACTCGGGACAA
AGAGAACCGCAGCCCATCGGACCCTGTCGATAGCATGCCCTCTCCAATGT
GGAACCACTACCCAACGCCGCCGTACTACAACCAACCTGAGGTTACCAGT
TCCCAGCACAAGCGTAGGACTCTACAGGAGGAGGTTTCTCTCTACACCCC
TAGGGAGTATGGACCCACTCTTCAGCGAAATTTCTATGATTACGATGGAC
CCTCTCTCAGAGCCCGCGGGGATCCAAAGCCACGTCCAAAATCGGACTAC
CTCGCGGGAAATCGCAAGGTGAAAGAACTGATGGATCCTATAGATGGCAT
GACGGCGAACCAGCTGGCTTCGGGTAACCAGCCAGAACCTGCCTCGCCCA
AGAAACACGGAAGGCCCAGGGCACTCTCACGCCCGGAATACCATCCCCCA
GCGGAATCCAGGCCCGAAGCAAGCCCGAAACGACTCTCTCGCGTCCAAGC
GGCAATATCAGCTTTCAATGCAAAAGAGCAGGAGGCTGAACTGCAGAAAC
GCTTGACCGGCAAGGAGCTTGAGAACGAGTTCGAAAAGCTACTGGATGCT
AGGAATATTCCTCATAACATGCGAGACAAGATGAGGTCTCTGGATACCAA
CATAAAAGCAGACTTCATTATGAAGGATCGAGCCGAAAATACTGCGCCGC
ACAGCACTAGTGCTAGTGGTACGGATAGTACCGGTCGTCGGGGGCGCAAG
AAGGAGCCAAAGGAGGACCGCCATGGCCAAGACAGCAAAGGATCTCGCTC
GCGATCCCGCAGTCGCGGCTTCTCATTCTCCAAAGGCAGCTCTTCGCCTA
AGAAGCAGCGCCCCGACAGCGGGAGTTTCTATAGGCGTCCCAAATCCGCC
GACTATTCACAGCCCACAGGATTCTCCAGGCTCGGAACCCCGTCAGCTTC
CACTACCTCACTCTCTGCCACAGCTTGTGATACTGCAGCTGACCCGTCGG
ACTTTGTGCATTATCTGAGAGAAATCCAGAAGCCAGAAATGGTCGAGGTT
GGGAAAATGCACAAGCTTCGCATCCTCCTCCGGAATGAAACTGTCAGCTG
GGTTGATACGTTCATTGCGGACGGTGGTATGGATGAGGTGGTGCAACTGC
TTTACAGGATTATGAAGGTTGAATGGAGGGAAGAGCATGAAGATACCCTG
CTTCACGAAACCTTGTTATGCTTGAAAGCTCTTTGTACAACATCCATCGC
TCTGCAGCATCTCACCAACATCGAGGGCGAGCTTTTCCCCGCATTGCTGC
GAATGCTATTTGACGAAGAGAAGAAGGGCCCAAGCGAGTACACAACCCGT
GGGATTATCATCAATCTCCTGTTTACTCAGCTCTCTGCTGTATCATCCGA
CGAGATGGCTGCCAGCCGGGCTTCACGCATCTTATCCTACCTGCGCGACC
CGTCTCCCCCGGAGGACAGTCAGCCTCTGAGTTTTATCGCAAACATATAT
CAGTCACGCCCCTACCGAGTCTGGTGCAAGGAGGTTACCAATGTGACCAA
GGAAGTTTTCTGGATCTTCCTGCATCATCTCAACGTGATCCCGATCTTGA
AAGACGATAAACCGGGTGTGAGCTACCGAGAACGTCATTTCCCTGCCCCT
AGGCCTCCAGTTCCCGCCGCTCCATATGTTGGTGGCGTGGAATGGGATGC
GACCAACTACTTGGCTGCGCACCTGGACCTCATGAATGGCCTGGTGGCGT
CGTTGCCAACGAGCGAAGAACGTAACCAGCTTCGAGATGAATTTCGAGCC
TCGGGATTCGAGAAGGTCATGGGCGGCAGTTTGCGAACATGCAAGGAGAA
GTTTTATTCCTCCGTGCACGATTGCCTAAAGACATGGGTTGCTGCAGCTG
TAGCTGATGGGTGGCCATACACATCGGTCCGCGAAGGTCCTCCGCGGCCG
GAGCCTGGGTCGCCGAGCAAAACCGCGATCAAAGCAGCAGCTGGAAGCCC
CAGAAAGGGTGTCTTGGACGAACAGCCTCCCAAGCTGGAACTTGCGCTGG
ATGTCCCTGCTGGTCGTGGCGGGGCCCAAGGCAACAGTGGCCTTGGGAAT
TGGCTCTAGATGGCTCCCAGCATACAACCCCCGAGCATCTTTGACGATTC
CTCCCGTGGTCCTACCAAGCCTTCCGTCCTGCGAGCAATCTGGTCATCCA
AGGCCCACAAACGGACTTCATCTGCAGATGATGTCCTCGCCCCTAGAGTC
GTTGATAAAGGCCAGCCTAGTGGCAGCCCATATGCGCCCCCAGTCGATGG
ACCTTACAACCCTGCGGAACAGCCACTGGCAGAAATAGCCCTCAACCGGG
ATACAGCAGACGTTAGTTCAACCCAGAGATCACCTGGAAAGCAAGGGAAA
CACACTCTACACAAGAAAACAAAAAGCGCCGTCTCACTGAAATCTCTCAA
GAGCTATATGGAACGCAAGGACAAGTCGGATGAGACGCCAGATGACGAAG
CAGCGAATCTGAAGCCGAAGAAAGCAAAGTCGGCCAACAGTCTCACGGCT
ATCTTGAAACGATCCCAACGCGGAAGGAAAGGAGAAAACTCGAAGAGCAC
TCGGGACAAAGAGAACCGCAGCCCATCGGACCCTGTCGATAGCATGCCCT
CTCCAATGTGGAACCACTACCCAACGCCGCCGTACTACAACCAACCTGAG
GTTACCAGTTCCCAGCACAAGCGTAGGACTCTACAGGAGGAGGTTTCTCT
CTACACCCCTAGGGAGTATGGACCCACTCTTCAGCGAAATTTCTATGATT
ACGATGGACCCTCTCTCAGAGCCCGCGGGGATCCAAAGCCACGTCCAAAA
TCGGACTACCTCGCGGGAAATCGCAAGGTGAAAGAACTGATGGATCCTAT
AGATGGCATGACGGCGAACCAGCTGGCTTCGGGTAACCAGCCAGAACCTG
CCTCGCCCAAGAAACACGGAAGGCCCAGGGCACTCTCACGCCCGGAATAC
CATCCCCCAGCGGAATCCAGGCCCGAAGCAAGCCCGAAACGACTCTCTCG
CGTCCAAGCGGCAATATCAGCTTTCAATGCAAAAGAGCAGGAGGCTGAAC
TGCAGAAACGCTTGACCGGCAAGGAGCTTGAGAACGAGTTCGAAAAGCTA
CTGGATGCTAGGAATATTCCTCATAACATGCGAGACAAGATGAGGTCTCT
GGATACCAACATAAAAGCAGACTTCATTATGAAGGATCGAGCCGAAAATA
CTGCGCCGCACAGCACTAGTGCTAGTGGTACGGATAGTACCGGTCGTCGG
GGGCGCAAGAAGGAGCCAAAGGAGGACCGCCATGGCCAAGACAGCAAAGG
ATCTCGCTCGCGATCCCGCAGTCGCGGCTTCTCATTCTCCAAAGGCAGCT
CTTCGCCTAAGAAGCAGCGCCCCGACAGCGGGAGTTTCTATAGGCGTCCC
AAATCCGCCGACTATTCACAGCCCACAGGATTCTCCAGGCTCGGAACCCC
GTCAGCTTCCACTACCTCACTCTCTGCCACAGCTTGTGATACTGCAGCTG
ACCCGTCGGACTTTGTGCATTATCTGAGAGAAATCCAGAAGCCAGAAATG
GTCGAGGTTGGGAAAATGCACAAGCTTCGCATCCTCCTCCGGAATGAAAC
TGTCAGCTGGGTTGATACGTTCATTGCGGACGGTGGTATGGATGAGGTGG
TGCAACTGCTTTACAGGATTATGAAGGTTGAATGGAGGGAAGAGCATGAA
GATACCCTGCTTCACGAAACCTTGTTATGCTTGAAAGCTCTTTGTACAAC
ATCCATCGCTCTGCAGCATCTCACCAACATCGAGGGCGAGCTTTTCCCCG
CATTGCTGCGAATGCTATTTGACGAAGAGAAGAAGGGCCCAAGCGAGTAC
ACAACCCGTGGGATTATCATCAATCTCCTGTTTACTCAGCTCTCTGCTGT
ATCATCCGACGAGATGGCTGCCAGCCGGGCTTCACGCATCTTATCCTACC
TGCGCGACCCGTCTCCCCCGGAGGACAGTCAGCCTCTGAGTTTTATCGCA
AACATATATCAGTCACGCCCCTACCGAGTCTGGTGCAAGGAGGTTACCAA
TGTGACCAAGGAAGTTTTCTGGATCTTCCTGCATCATCTCAACGTGATCC
CGATCTTGAAAGACGATAAACCGGGTGTGAGCTACCGAGAACGTCATTTC
CCTGCCCCTAGGCCTCCAGTTCCCGCCGCTCCATATGTTGGTGGCGTGGA
ATGGGATGCGACCAACTACTTGGCTGCGCACCTGGACCTCATGAATGGCC
TGGTGGCGTCGTTGCCAACGAGCGAAGAACGTAACCAGCTTCGAGATGAA
TTTCGAGCCTCGGGATTCGAGAAGGTCATGGGCGGCAGTTTGCGAACATG
CAAGGAGAAGTTTTATTCCTCCGTGCACGATTGCCTAAAGACATGGGTTG
CTGCAGCTGTAGCTGATGGGTGGCCATACACATCGGTCCGCGAAGGTCCT
CCGCGGCCGGAGCCTGGGTCGCCGAGCAAAACCGCGATCAAAGCAGCAGC
TGGAAGCCCCAGAAAGGGTGTCTTGGACGAACAGCCTCCCAAGCTGGAAC
TTGCGCTGGATGTCCCTGCTGGTCGTGGCGGGGCCCAAGGCAACAGTGGC
CTTGGGAATTGGCTCTAGATGGCTCCCAGCATACAACCCCCGAGCATCTT
TGACGATTCCTCCCGTGGTCCTACCAAGCCTTCCGTCCTGCGAGCAATCT
GGTCATCCAAGGCCCACAAACGGACTTCATCTGCAGATGATGTCCTCGCC
CCTAGAGTCGTTGATAAAGGCCAGCCTAGTGGCAGCCCATATGCGCCCCC
AGTCGATGGACCTTACAACCCTGCGGAACAGCCACTGGCAGAAATAGCCC
TCAACCGGGATACAGCAGACGTTAGTTCAACCCAGAGATCACCTGGAAAG
CAAGGGAAACACACTCTACACAAGAAAACAAAAAGCGCCGTCTCACTGAA
ATCTCTCAAGAGCTATATGGAACGCAAGGACAAGTCGGATGAGACGCCAG
ATGACGAAGCAGCGAATCTGAAGCCGAAGAAAGCAAAGTCGGCCAACAGT
CTCACGGCTATCTTGAAACGATCCCAACGCGGAAGGAAAGGAGAAAACTC
GAAGAGCACTCGGGACAAAGAGAACCGCAGCCCATCGGACCCTGTCGATA
GCATGCCCTCTCCAATGTGGAACCACTACCCAACGCCGCCGTACTACAAC
CAACCTGAGGTTACCAGTTCCCAGCACAAGCGTAGGACTCTACAGGAGGA
GGTTTCTCTCTACACCCCTAGGGAGTATGGACCCACTCTTCAGCGAAATT
TCTATGATTACGATGGACCCTCTCTCAGAGCCCGCGGGGATCCAAAGCCA
CGTCCAAAATCGGACTACCTCGCGGGAAATCGCAAGGTGAAAGAACTGAT
GGATCCTATAGATGGCATGACGGCGAACCAGCTGGCTTCGGGTAACCAGC
CAGAACCTGCCTCGCCCAAGAAACACGGAAGGCCCAGGGCACTCTCACGC
CCGGAATACCATCCCCCAGCGGAATCCAGGCCCGAAGCAAGCCCGAAACG
ACTCTCTCGCGTCCAAGCGGCAATATCAGCTTTCAATGCAAAAGAGCAGG
AGGCTGAACTGCAGAAACGCTTGACCGGCAAGGAGCTTGAGAACGAGTTC
GAAAAGCTACTGGATGCTAGGAATATTCCTCATAACATGCGAGACAAGAT
GAGGTCTCTGGATACCAACATAAAAGCAGACTTCATTATGAAGGATCGAG
CCGAAAATACTGCGCCGCACAGCACTAGTGCTAGTGGTACGGATAGTACC
GGTCGTCGGGGGCGCAAGAAGGAGCCAAAGGAGGACCGCCATGGCCAAGA
CAGCAAAGGATCTCGCTCGCGATCCCGCAGTCGCGGCTTCTCATTCTCCA
AAGGCAGCTCTTCGCCTAAGAAGCAGCGCCCCGACAGCGGGAGTTTCTAT
AGGCGTCCCAAATCCGCCGACTATTCACAGCCCACAGGATTCTCCAGGCT
CGGAACCCCGTCAGCTTCCACTACCTCACTCTCTGCCACAGCTTGTGATA
CTGCAGCTGACCCGTCGGACTTTGTGCATTATCTGAGAGAAATCCAGAAG
CCAGAAATGGTCGAGGTTGGGAAAATGCACAAGCTTCGCATCCTCCTCCG
GAATGAAACTGTCAGCTGGGTTGATACGTTCATTGCGGACGGTGGTATGG
ATGAGGTGGTGCAACTGCTTTACAGGATTATGAAGGTTGAATGGAGGGAA
GAGCATGAAGATACCCTGCTTCACGAAACCTTGTTATGCTTGAAAGCTCT
TTGTACAACATCCATCGCTCTGCAGCATCTCACCAACATCGAGGGCGAGC
TTTTCCCCGCATTGCTGCGAATGCTATTTGACGAAGAGAAGAAGGGCCCA
AGCGAGTACACAACCCGTGGGATTATCATCAATCTCCTGTTTACTCAGCT
CTCTGCTGTATCATCCGACGAGATGGCTGCCAGCCGGGCTTCACGCATCT
TATCCTACCTGCGCGACCCGTCTCCCCCGGAGGACAGTCAGCCTCTGAGT
TTTATCGCAAACATATATCAGTCACGCCCCTACCGAGTCTGGTGCAAGGA
GGTTACCAATGTGACCAAGGAAGTTTTCTGGATCTTCCTGCATCATCTCA
ACGTGATCCCGATCTTGAAAGACGATAAACCGGGTGTGAGCTACCGAGAA
CGTCATTTCCCTGCCCCTAGGCCTCCAGTTCCCGCCGCTCCATATGTTGG
TGGCGTGGAATGGGATGCGACCAACTACTTGGCTGCGCACCTGGACCTCA
TGAATGGCCTGGTGGCGTCGTTGCCAACGAGCGAAGAACGTAACCAGCTT
CGAGATGAATTTCGAGCCTCGGGATTCGAGAAGGTCATGGGCGGCAGTTT
GCGAACATGCAAGGAGAAGTTTTATTCCTCCGTGCACGATTGCCTAAAGA
CATGGGTTGCTGCAGCTGTAGCTGATGGGTGGCCATACACATCGGTCCGC
GAAGGTCCTCCGCGGCCGGAGCCTGGGTCGCCGAGCAAAACCGCGATCAA
AGCAGCAGCTGGAAGCCCCAGAAAGGGTGTCTTGGACGAACAGCCTCCCA
AGCTGGAACTTGCGCTGGATGTCCCTGCTGGTCGTGGCGGGGCCCAAGGC
AACAGTGGCCTTGGGAATTGGCTCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0030036 | actin cytoskeleton organization |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003779 | actin binding |
| GO:0017048 | Rho GTPase binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016024 |
| DBxref | InterPro:IPR010473 |
| DBxref | PFAM:PF06371 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:1404231..1406901 + |
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