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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:1447338..1448598+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003418-T1 ID=CBS51388_003418-T1|Name=CBS51388_003418-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1261bp|location=Sequence derived from alignment at An04:1447338..1448598+ (Aspergillus niger CBS 513.88)
ATGAAGCTCAACATCTCCTACCCGGCCAATGGGTCTCAGAAGATCATCGA
GGTTGACGATGAGCGCAAGCTCCGTCCCTTCATGGAGAAGCGCATGGGAA
CCGAAGTCAGCAACCCTCCCCCCTTGGATATCCGCACCCGAAAACACCAC
ATTTGGAAAAGAAAAAGAGACGAAATTTGAGAAATACACGAAAAATATGG
GAAAAGCAGAAGACTGATTGGGGTTTCTTTTTTTGCTATAGGTTGCCGGC
GACTCTCTCGGTGACGAGTTCAAGGGTTACATCCTCAAGATCACCGGTGG
TAACGACAAGCAAGGTACGACTGGATTGCTTTCCCCCTTTTCGGATTTGG
GCTCGACTAGGAGGACTCGAAAACGAACAAGAAATTGGATATCATGGTTA
AGAATGTACATTGGATGCTGACTTTGGCTTCTTCTCAGGTTTCCCCATGA
AGCAGGGTGGTATGTACCGACCGACGCAAATATAATCCGACAATCACAAA
AACAGCAGAAACTCATCGATTTGTGTGCAGTTCTCCTCCCCACCCGTACC
CGCCTCCTCCTTGCCGATGGCCACAGGTAAATGCGACCTGCCGATAATGG
AGTTTACGAAATGGAAGACTGATGTCCACTGCAGCTGCTACCGCCCCCGC
CGCACTGGTGAGCGCAAGCGCAAGTCCGTCCGTGGTGGTAGGTTACCAAA
CAACAATATATCCGTTACTATCGTGGTTAGGAGTTGATTCGTTGACGCTT
CGTGTTTACAGCCATCACCGGTCAGGACCTCTCTGTTCTTGCCCTGAGCA
TCGTCAAGCAGGGTGAGGGTGAGCTCCCCGGTCTCACCGACACCGTTGTC
CCCAAGAGACTCGGCCCCAAGCGTGCCACCAAGATCCGCCGCTTCTTCGG
TCTCGACAAGAAGGACGACGTCCGCAAGTTCGTCATCCGTCGTACCGTCA
CCCGTGAGGGCAAGCCCGACTACACCAAGGCCCCCAAGATCCAGCGTCTG
GTTACTCCCCAGCGTCTCCAGCGCAAGCGCCAGCGCATTGCCCTCAAGCG
CCGTCGTGCTGAGGCTGCCCGCGAGGCTGCGTAAGTTGCACCCTTTCCTC
TCTCTCGGCGGGGACATGTGCCCAAATACATCAAATGATTATCCGCTAAC
CGTGCGATCCACAGTAACGACTACGCCAAGCTCCTTGCCAGCCGTGTCCA
CGAGGAGAAGGCCAAGCGTGATGAGCTCCGCAAGCGGAGAGCGTCTTCGA
TGAGGAAGTAA back to topCoding sequence (CDS) from alignment at An04:1447338..1448598+ >CBS51388_003418-T1 ID=CBS51388_003418-T1|Name=CBS51388_003418-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4998bp|location=Sequence derived from alignment at An04:1447338..1448598+ (Aspergillus niger CBS 513.88)
ATGAAGCTCAACATCTCCTACCCGGCCAATGGGTCTCAGAAGATCATCGA
GGTTGACGATGAGCGCAAGCTCCGTCCCTTCATGGAGAAGCGCATGGGAA
CCGAAGTTGCCGGCGACTCTCTCGGTGACGAGTTCAAGGGTTACATCCTC
AAGATCACCGGTGGTAACGACAAGCAAGGTTTCCCCATGAAGCAGGGTGT
TCTCCTCCCCACCCGTACCCGCCTCCTCCTTGCCGATGGCCACAGCTGCT
ACCGCCCCCGCCGCACTGGTGAGCGCAAGCGCAAGTCCGTCCGTGGTGCC
ATCACCGGTCAGGACCTCTCTGTTCTTGCCCTGAGCATCGTCAAGCAGGG
TGAGGGTGAGCTCCCCGGTCTCACCGACACCGTTGTCCCCAAGAGACTCG
GCCCCAAGCGTGCCACCAAGATCCGCCGCTTCTTCGGTCTCGACAAGAAG
GACGACGTCCGCAAGTTCGTCATCCGTCGTACCGTCACCCGTGAGGGCAA
GCCCGACTACACCAAGGCCCCCAAGATCCAGCGTCTGGTTACTCCCCAGC
GTCTCCAGCGCAAGCGCCAGCGCATTGCCCTCAAGCGCCGTCGTGCTGAG
GCTGCCCGCGAGGCTGCTAACGACTACGCCAAGCTCCTTGCCAGCCGTGT
CCACGAGGAGAAGGCCAAGCGTGATGAGCTCCGCAAGCGGAGAGCGTCTT
CGATGAGGAAGTAAATGAAGCTCAACATCTCCTACCCGGCCAATGGGTCT
CAGAAGATCATCGAGGTTGACGATGAGCGCAAGCTCCGTCCCTTCATGGA
GAAGCGCATGGGAACCGAAGTTGCCGGCGACTCTCTCGGTGACGAGTTCA
AGGGTTACATCCTCAAGATCACCGGTGGTAACGACAAGCAAGGTTTCCCC
ATGAAGCAGGGTGTTCTCCTCCCCACCCGTACCCGCCTCCTCCTTGCCGA
TGGCCACAGCTGCTACCGCCCCCGCCGCACTGGTGAGCGCAAGCGCAAGT
CCGTCCGTGGTGCCATCACCGGTCAGGACCTCTCTGTTCTTGCCCTGAGC
ATCGTCAAGCAGGGTGAGGGTGAGCTCCCCGGTCTCACCGACACCGTTGT
CCCCAAGAGACTCGGCCCCAAGCGTGCCACCAAGATCCGCCGCTTCTTCG
GTCTCGACAAGAAGGACGACGTCCGCAAGTTCGTCATCCGTCGTACCGTC
ACCCGTGAGGGCAAGCCCGACTACACCAAGGCCCCCAAGATCCAGCGTCT
GGTTACTCCCCAGCGTCTCCAGCGCAAGCGCCAGCGCATTGCCCTCAAGC
GCCGTCGTGCTGAGGCTGCCCGCGAGGCTGCTAACGACTACGCCAAGCTC
CTTGCCAGCCGTGTCCACGAGGAGAAGGCCAAGCGTGATGAGCTCCGCAA
GCGGAGAGCGTCTTCGATGAGGAAGTAAATGAAGCTCAACATCTCCTACC
CGGCCAATGGGTCTCAGAAGATCATCGAGGTTGACGATGAGCGCAAGCTC
CGTCCCTTCATGGAGAAGCGCATGGGAACCGAAGTTGCCGGCGACTCTCT
CGGTGACGAGTTCAAGGGTTACATCCTCAAGATCACCGGTGGTAACGACA
AGCAAGGTTTCCCCATGAAGCAGGGTGTTCTCCTCCCCACCCGTACCCGC
CTCCTCCTTGCCGATGGCCACAGCTGCTACCGCCCCCGCCGCACTGGTGA
GCGCAAGCGCAAGTCCGTCCGTGGTGCCATCACCGGTCAGGACCTCTCTG
TTCTTGCCCTGAGCATCGTCAAGCAGGGTGAGGGTGAGCTCCCCGGTCTC
ACCGACACCGTTGTCCCCAAGAGACTCGGCCCCAAGCGTGCCACCAAGAT
CCGCCGCTTCTTCGGTCTCGACAAGAAGGACGACGTCCGCAAGTTCGTCA
TCCGTCGTACCGTCACCCGTGAGGGCAAGCCCGACTACACCAAGGCCCCC
AAGATCCAGCGTCTGGTTACTCCCCAGCGTCTCCAGCGCAAGCGCCAGCG
CATTGCCCTCAAGCGCCGTCGTGCTGAGGCTGCCCGCGAGGCTGCTAACG
ACTACGCCAAGCTCCTTGCCAGCCGTGTCCACGAGGAGAAGGCCAAGCGT
GATGAGCTCCGCAAGCGGAGAGCGTCTTCGATGAGGAAGTAAATGAAGCT
CAACATCTCCTACCCGGCCAATGGGTCTCAGAAGATCATCGAGGTTGACG
ATGAGCGCAAGCTCCGTCCCTTCATGGAGAAGCGCATGGGAACCGAAGTT
GCCGGCGACTCTCTCGGTGACGAGTTCAAGGGTTACATCCTCAAGATCAC
CGGTGGTAACGACAAGCAAGGTTTCCCCATGAAGCAGGGTGTTCTCCTCC
CCACCCGTACCCGCCTCCTCCTTGCCGATGGCCACAGCTGCTACCGCCCC
CGCCGCACTGGTGAGCGCAAGCGCAAGTCCGTCCGTGGTGCCATCACCGG
TCAGGACCTCTCTGTTCTTGCCCTGAGCATCGTCAAGCAGGGTGAGGGTG
AGCTCCCCGGTCTCACCGACACCGTTGTCCCCAAGAGACTCGGCCCCAAG
CGTGCCACCAAGATCCGCCGCTTCTTCGGTCTCGACAAGAAGGACGACGT
CCGCAAGTTCGTCATCCGTCGTACCGTCACCCGTGAGGGCAAGCCCGACT
ACACCAAGGCCCCCAAGATCCAGCGTCTGGTTACTCCCCAGCGTCTCCAG
CGCAAGCGCCAGCGCATTGCCCTCAAGCGCCGTCGTGCTGAGGCTGCCCG
CGAGGCTGCTAACGACTACGCCAAGCTCCTTGCCAGCCGTGTCCACGAGG
AGAAGGCCAAGCGTGATGAGCTCCGCAAGCGGAGAGCGTCTTCGATGAGG
AAGTAAATGAAGCTCAACATCTCCTACCCGGCCAATGGGTCTCAGAAGAT
CATCGAGGTTGACGATGAGCGCAAGCTCCGTCCCTTCATGGAGAAGCGCA
TGGGAACCGAAGTTGCCGGCGACTCTCTCGGTGACGAGTTCAAGGGTTAC
ATCCTCAAGATCACCGGTGGTAACGACAAGCAAGGTTTCCCCATGAAGCA
GGGTGTTCTCCTCCCCACCCGTACCCGCCTCCTCCTTGCCGATGGCCACA
GCTGCTACCGCCCCCGCCGCACTGGTGAGCGCAAGCGCAAGTCCGTCCGT
GGTGCCATCACCGGTCAGGACCTCTCTGTTCTTGCCCTGAGCATCGTCAA
GCAGGGTGAGGGTGAGCTCCCCGGTCTCACCGACACCGTTGTCCCCAAGA
GACTCGGCCCCAAGCGTGCCACCAAGATCCGCCGCTTCTTCGGTCTCGAC
AAGAAGGACGACGTCCGCAAGTTCGTCATCCGTCGTACCGTCACCCGTGA
GGGCAAGCCCGACTACACCAAGGCCCCCAAGATCCAGCGTCTGGTTACTC
CCCAGCGTCTCCAGCGCAAGCGCCAGCGCATTGCCCTCAAGCGCCGTCGT
GCTGAGGCTGCCCGCGAGGCTGCTAACGACTACGCCAAGCTCCTTGCCAG
CCGTGTCCACGAGGAGAAGGCCAAGCGTGATGAGCTCCGCAAGCGGAGAG
CGTCTTCGATGAGGAAGTAAATGAAGCTCAACATCTCCTACCCGGCCAAT
GGGTCTCAGAAGATCATCGAGGTTGACGATGAGCGCAAGCTCCGTCCCTT
CATGGAGAAGCGCATGGGAACCGAAGTTGCCGGCGACTCTCTCGGTGACG
AGTTCAAGGGTTACATCCTCAAGATCACCGGTGGTAACGACAAGCAAGGT
TTCCCCATGAAGCAGGGTGTTCTCCTCCCCACCCGTACCCGCCTCCTCCT
TGCCGATGGCCACAGCTGCTACCGCCCCCGCCGCACTGGTGAGCGCAAGC
GCAAGTCCGTCCGTGGTGCCATCACCGGTCAGGACCTCTCTGTTCTTGCC
CTGAGCATCGTCAAGCAGGGTGAGGGTGAGCTCCCCGGTCTCACCGACAC
CGTTGTCCCCAAGAGACTCGGCCCCAAGCGTGCCACCAAGATCCGCCGCT
TCTTCGGTCTCGACAAGAAGGACGACGTCCGCAAGTTCGTCATCCGTCGT
ACCGTCACCCGTGAGGGCAAGCCCGACTACACCAAGGCCCCCAAGATCCA
GCGTCTGGTTACTCCCCAGCGTCTCCAGCGCAAGCGCCAGCGCATTGCCC
TCAAGCGCCGTCGTGCTGAGGCTGCCCGCGAGGCTGCTAACGACTACGCC
AAGCTCCTTGCCAGCCGTGTCCACGAGGAGAAGGCCAAGCGTGATGAGCT
CCGCAAGCGGAGAGCGTCTTCGATGAGGAAGTAAATGAAGCTCAACATCT
CCTACCCGGCCAATGGGTCTCAGAAGATCATCGAGGTTGACGATGAGCGC
AAGCTCCGTCCCTTCATGGAGAAGCGCATGGGAACCGAAGTTGCCGGCGA
CTCTCTCGGTGACGAGTTCAAGGGTTACATCCTCAAGATCACCGGTGGTA
ACGACAAGCAAGGTTTCCCCATGAAGCAGGGTGTTCTCCTCCCCACCCGT
ACCCGCCTCCTCCTTGCCGATGGCCACAGCTGCTACCGCCCCCGCCGCAC
TGGTGAGCGCAAGCGCAAGTCCGTCCGTGGTGCCATCACCGGTCAGGACC
TCTCTGTTCTTGCCCTGAGCATCGTCAAGCAGGGTGAGGGTGAGCTCCCC
GGTCTCACCGACACCGTTGTCCCCAAGAGACTCGGCCCCAAGCGTGCCAC
CAAGATCCGCCGCTTCTTCGGTCTCGACAAGAAGGACGACGTCCGCAAGT
TCGTCATCCGTCGTACCGTCACCCGTGAGGGCAAGCCCGACTACACCAAG
GCCCCCAAGATCCAGCGTCTGGTTACTCCCCAGCGTCTCCAGCGCAAGCG
CCAGCGCATTGCCCTCAAGCGCCGTCGTGCTGAGGCTGCCCGCGAGGCTG
CTAACGACTACGCCAAGCTCCTTGCCAGCCGTGTCCACGAGGAGAAGGCC
AAGCGTGATGAGCTCCGCAAGCGGAGAGCGTCTTCGATGAGGAAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018282 |
| DBxref | InterPro:IPR014401 |
| DBxref | InterPro:IPR001377 |
| DBxref | PFAM:PF01092 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:1447338..1448598 + |
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