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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:1479755..1480957- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003423-T1 ID=CBS51388_003423-T1|Name=CBS51388_003423-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1203bp|location=Sequence derived from alignment at An04:1479755..1480957- (Aspergillus niger CBS 513.88)
ATGCAGTTCGCTCTGCCTCCGCGGAGGACTCCGATAACCCCTCCGTACGC
TCGCTCGTCGCGAATCTCACTCCAGCGCAGGAAACAGCTCAAAGCTGTGG
CCATTCTGGGCTTCGCCCTGCTCACCGTCTTCTTCCTTCTTTCCCAGTTT
TTCTACACAAGTACAGGGGCCCCGGCCGTACCAGCAGGAACATCCAGCAT
CGTCGTCGTCACCGTTCTAGACAGGACGGCTTGGAGTAACGAGTACATCC
AGAAGATCGTCAAGAACAGAGAGGACTATGCTAAGCGACATGGTAAGGCG
ACAGCAACCCAGTCACTTTCCTCGTGTCCAGTAACTCTTCTAATGTCTCA
CAATTGTGATTCAGGCTATACGAACTTCTTTGCCAACGTTTCCGACTATG
AAACCGTCCTCGATAACGCCCCGAAGTCCTGGGCCGTCCTCCCAGCCCTC
CGTCACGCGATGGCCTCCAACCCGTACTCGAAGTACTTTTTCCACCTAGA
TGCTCACGCCCTAATAATGAACCCGAGCAAATCACTTGAATCGCACGTCC
TCGACAAGGACCGTCTCGAATCCCTCATGCTCAAGGACGTCTCCGTCGTG
CCTCCCGATAGCATCATCAAGACGTTTTCGCATATACAGGCTCAAGATGT
CGATCTCATTATGACCACCGATGCGGAGGATTTGAGCTCCGGTAGCTTCC
TCCTTCGACAGGGTGATTTTGCCAAATACTTCCTCGACTTCTGGTTCGAC
CCTCTGTACATTAGCTATAACTTTGCAAAGGCCGAGACCCACGTTCTGGT
AAGTGAGGAGACACATTACGCTTCTATCTTTTTAGCTTTTCTATTTATAC
GCCGGACACCTCTAGTCGGATGTTCGCCTTATCAAATTCGGTTCTTTATT
TTTTGCTTTTGCTTCATGATTTCCTGCGTCACCAGACTAAGTAACTAACC
TACGTCATCAATTGCTGTCCAGGATCACATTGTGCAATGGCACCCAACTA
TCTTGGCCAGATTGGCTCTGGTTCCACAGCGGACCATCAATGGGTACAGC
AAGGATTCAAACGGGGCTGGCGTGGACGGCGTCTATAAGGACGGTGACTT
CGTCATTCGGTTCCTTGGCTGTGACACCGACACGAAGCGGAGTTGCGAGA
AGGAAATGGAGCCGTATTATCGGCTTTGGGCGGGAAAGATGAAGAATGAG
TAA back to topCoding sequence (CDS) from alignment at An04:1479755..1480957- >CBS51388_003423-T1 ID=CBS51388_003423-T1|Name=CBS51388_003423-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2871bp|location=Sequence derived from alignment at An04:1479755..1480957- (Aspergillus niger CBS 513.88)
GATCACATTGTGCAATGGCACCCAACTATCTTGGCCAGATTGGCTCTGGT
TCCACAGCGGACCATCAATGGGTACAGCAAGGATTCAAACGGGGCTGGCG
TGGACGGCGTCTATAAGGACGGTGACTTCGTCATTCGGTTCCTTGGCTGT
GACACCGACACGAAGCGGAGTTGCGAGAAGGAAATGGAGCCGTATTATCG
GCTTTGGGCGGGAAAGATGAAGAATGAGTAAGCTATACGAACTTCTTTGC
CAACGTTTCCGACTATGAAACCGTCCTCGATAACGCCCCGAAGTCCTGGG
CCGTCCTCCCAGCCCTCCGTCACGCGATGGCCTCCAACCCGTACTCGAAG
TACTTTTTCCACCTAGATGCTCACGCCCTAATAATGAACCCGAGCAAATC
ACTTGAATCGCACGTCCTCGACAAGGACCGTCTCGAATCCCTCATGCTCA
AGGACGTCTCCGTCGTGCCTCCCGATAGCATCATCAAGACGTTTTCGCAT
ATACAGGCTCAAGATGTCGATCTCATTATGACCACCGATGCGGAGGATTT
GAGCTCCGGTAGCTTCCTCCTTCGACAGGGTGATTTTGCCAAATACTTCC
TCGACTTCTGGTTCGACCCTCTGTACATTAGCTATAACTTTGCAAAGGCC
GAGACCCACGTTCTGATGCAGTTCGCTCTGCCTCCGCGGAGGACTCCGAT
AACCCCTCCGTACGCTCGCTCGTCGCGAATCTCACTCCAGCGCAGGAAAC
AGCTCAAAGCTGTGGCCATTCTGGGCTTCGCCCTGCTCACCGTCTTCTTC
CTTCTTTCCCAGTTTTTCTACACAAGTACAGGGGCCCCGGCCGTACCAGC
AGGAACATCCAGCATCGTCGTCGTCACCGTTCTAGACAGGACGGCTTGGA
GTAACGAGTACATCCAGAAGATCGTCAAGAACAGAGAGGACTATGCTAAG
CGACATGGATCACATTGTGCAATGGCACCCAACTATCTTGGCCAGATTGG
CTCTGGTTCCACAGCGGACCATCAATGGGTACAGCAAGGATTCAAACGGG
GCTGGCGTGGACGGCGTCTATAAGGACGGTGACTTCGTCATTCGGTTCCT
TGGCTGTGACACCGACACGAAGCGGAGTTGCGAGAAGGAAATGGAGCCGT
ATTATCGGCTTTGGGCGGGAAAGATGAAGAATGAGTAAGCTATACGAACT
TCTTTGCCAACGTTTCCGACTATGAAACCGTCCTCGATAACGCCCCGAAG
TCCTGGGCCGTCCTCCCAGCCCTCCGTCACGCGATGGCCTCCAACCCGTA
CTCGAAGTACTTTTTCCACCTAGATGCTCACGCCCTAATAATGAACCCGA
GCAAATCACTTGAATCGCACGTCCTCGACAAGGACCGTCTCGAATCCCTC
ATGCTCAAGGACGTCTCCGTCGTGCCTCCCGATAGCATCATCAAGACGTT
TTCGCATATACAGGCTCAAGATGTCGATCTCATTATGACCACCGATGCGG
AGGATTTGAGCTCCGGTAGCTTCCTCCTTCGACAGGGTGATTTTGCCAAA
TACTTCCTCGACTTCTGGTTCGACCCTCTGTACATTAGCTATAACTTTGC
AAAGGCCGAGACCCACGTTCTGATGCAGTTCGCTCTGCCTCCGCGGAGGA
CTCCGATAACCCCTCCGTACGCTCGCTCGTCGCGAATCTCACTCCAGCGC
AGGAAACAGCTCAAAGCTGTGGCCATTCTGGGCTTCGCCCTGCTCACCGT
CTTCTTCCTTCTTTCCCAGTTTTTCTACACAAGTACAGGGGCCCCGGCCG
TACCAGCAGGAACATCCAGCATCGTCGTCGTCACCGTTCTAGACAGGACG
GCTTGGAGTAACGAGTACATCCAGAAGATCGTCAAGAACAGAGAGGACTA
TGCTAAGCGACATGGATCACATTGTGCAATGGCACCCAACTATCTTGGCC
AGATTGGCTCTGGTTCCACAGCGGACCATCAATGGGTACAGCAAGGATTC
AAACGGGGCTGGCGTGGACGGCGTCTATAAGGACGGTGACTTCGTCATTC
GGTTCCTTGGCTGTGACACCGACACGAAGCGGAGTTGCGAGAAGGAAATG
GAGCCGTATTATCGGCTTTGGGCGGGAAAGATGAAGAATGAGTAAGCTAT
ACGAACTTCTTTGCCAACGTTTCCGACTATGAAACCGTCCTCGATAACGC
CCCGAAGTCCTGGGCCGTCCTCCCAGCCCTCCGTCACGCGATGGCCTCCA
ACCCGTACTCGAAGTACTTTTTCCACCTAGATGCTCACGCCCTAATAATG
AACCCGAGCAAATCACTTGAATCGCACGTCCTCGACAAGGACCGTCTCGA
ATCCCTCATGCTCAAGGACGTCTCCGTCGTGCCTCCCGATAGCATCATCA
AGACGTTTTCGCATATACAGGCTCAAGATGTCGATCTCATTATGACCACC
GATGCGGAGGATTTGAGCTCCGGTAGCTTCCTCCTTCGACAGGGTGATTT
TGCCAAATACTTCCTCGACTTCTGGTTCGACCCTCTGTACATTAGCTATA
ACTTTGCAAAGGCCGAGACCCACGTTCTGATGCAGTTCGCTCTGCCTCCG
CGGAGGACTCCGATAACCCCTCCGTACGCTCGCTCGTCGCGAATCTCACT
CCAGCGCAGGAAACAGCTCAAAGCTGTGGCCATTCTGGGCTTCGCCCTGC
TCACCGTCTTCTTCCTTCTTTCCCAGTTTTTCTACACAAGTACAGGGGCC
CCGGCCGTACCAGCAGGAACATCCAGCATCGTCGTCGTCACCGTTCTAGA
CAGGACGGCTTGGAGTAACGAGTACATCCAGAAGATCGTCAAGAACAGAG
AGGACTATGCTAAGCGACATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016757 | transferase activity, transferring glycosyl groups |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:GT34 |
| DBxref | InterPro:IPR008630 |
| DBxref | PFAM:PF05637 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:1479755..1480957 - |
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