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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:1535804..1537741- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003449-T1 ID=CBS51388_003449-T1|Name=CBS51388_003449-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1938bp|location=Sequence derived from alignment at An04:1535804..1537741- (Aspergillus niger CBS 513.88)
ATGGCATCTTCTTTACTTCCCGTCGCCCTGCAGAATAAACTGCTGGGCTA
CAGCAGGGCCCCCAGCACCCAGCTGGCGGCGGCCCATCTGGACTTGTGAG
TGGCTGAGCAGCTTTCCATTGCCCCCGCGTCACTGCGGACGATCGCTCGC
TCGTCAGACGTTTGTTTTGTTTTCTTGGGAGCTCCATGCTAATCTGACAA
TCACCGGACAACCAGTCTTCGAAATATCGTTTTTGTCCTCTTTATCCTTC
GCTACGTTCGCAAGACATTCTATTCTTTGCGCGGTTATGGCATCTTCGGC
AGCATCCGCAATGCCTACGCCGCCGTCCGTCTCTTCTGTTATTCCATCTT
CTTGCGGTTCCCTGGCGTCCGTGGCCAGGTTGATAAGCAGGTTTCCACAG
CTATTGAGAATCTTGAATCGAAACTCGTCGCGTCTGGGCCCGGCGTTAAT
CGTTATCTGAATCTTCCGAAGGAAGGATGGACCGCTGAACAGGTTCGCGC
TGAGCTCGACAAGCTGGCGAACATGGAACATACGCGCTGGGAGGATGGTC
GTGTCAGTGGTGCTGTCTATCACGGTGGACAGGACCTGTTGAAGCTGCAG
GCGGAAGCCTTCGGACAGTTTGGTGTTGCCAACCCCATCCACCCTGATGT
GTTCCCTGGTGTTCGGAAGATGGAGGCCGAAGTCGTGGCTATGGTAATGA
TCCCCAGGTAATCGACGAGTATGCTGGCTTACTTGGATTAGGTTCTGGCG
TTGTTCAATGCCCCGTCCGATGGCGCGGGTGTCACCACCAGTGGTGGTAC
GGAGTCGATCATCATGGCGTGCTTGGGTGCGCGCCAGAAGGCTTTCCTCG
AGCGCGGCGTAAAGGAACCGGAAATGTGGGTGGCCACTACTATACCTTTC
CTGCTTATCAACTGACACGTCCGTAGGATCATCCCCGATACCGCCCATGC
TGCCTTCATCAAAGCCTGCAACTACTTCAAGATCAAGCTCCATCGCGTCC
CCTGCCCGGCTCCCGAGTACAAGGTGGACATCCCCTCCGTGCGTCGCCTG
ATTAACTCGAACACCGTCTTGATTGTTGGCTCGGCACCCAACTTCCCCCA
CGGAATTGTTGATGACATTCCGGCTCTGTCTCGCCTCGCGACGTCCTACA
AGATCCCTCTGCATGTTGACTGCTGCCTTGGCTCCTTTGTTGTTGCCTTC
TTGAAGAAGGCGGGCTTTGCCTCGCCCTATGAAGAGGAAGGTGGCTTTGA
TTTCCGCCTCCCTGGTGTGACTAGCATCAGTGTGGACACGCACAAGTACG
GATTTGCACCCAAGGGTAACTCAGTGCTCCTGTATCGCAACAAGACCTAC
CGCAGTTACCAATACTTCATCTACCCGGACTGGTCCGGTGGTGTTTATGC
CTCCCCGTCTGTGGCAGGTTCCCGTCCCGGTGCACTGATTGCCGGGTGCT
GGGCCAGTCTGATGAGCGTTGGCGAGTCTGGCTACATCAAGAGCTGCCTG
GACATCATGGGCGCGGCCAAGAAGTTTGAATCCTCGATCAAAGAGCACCC
AGTTCTGTCGAAGAGCTTGGACATTGTTGGAAAGCCCATGGTCAGCGTTG
TTGCCTTCTACAGCAAGAATGATGCCGTTGATATTTACGATATTGCGGAC
AGCCTTTCTGCCAAGGGCTGGCATCTCAATGCGCTTCAGTCGCCCCCGGC
AATCCACGTCGCGTTCACTGTCCCTACGGCCGCTGCTGTAGATGCACTTA
CCACCGACCTGGTCGTGGCTGTGGAGGCGGAGTTGGCAAAGGCGGAAGAG
AGGAAGCAGCAAGGCAAGTCGTACGTTGTTAAGCGTGGAGACACTGCTGC
CCTGTACGGCGTGGCCGGCAGCATGCCGGACAAGAGCATTGTCAGCCGCC
TGGCCGAGGGATTCCTGGACACCCTGTACAAAGCTTAG back to topCoding sequence (CDS) from alignment at An04:1535804..1537741- >CBS51388_003449-T1 ID=CBS51388_003449-T1|Name=CBS51388_003449-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6876bp|location=Sequence derived from alignment at An04:1535804..1537741- (Aspergillus niger CBS 513.88)
GATCATCCCCGATACCGCCCATGCTGCCTTCATCAAAGCCTGCAACTACT
TCAAGATCAAGCTCCATCGCGTCCCCTGCCCGGCTCCCGAGTACAAGGTG
GACATCCCCTCCGTGCGTCGCCTGATTAACTCGAACACCGTCTTGATTGT
TGGCTCGGCACCCAACTTCCCCCACGGAATTGTTGATGACATTCCGGCTC
TGTCTCGCCTCGCGACGTCCTACAAGATCCCTCTGCATGTTGACTGCTGC
CTTGGCTCCTTTGTTGTTGCCTTCTTGAAGAAGGCGGGCTTTGCCTCGCC
CTATGAAGAGGAAGGTGGCTTTGATTTCCGCCTCCCTGGTGTGACTAGCA
TCAGTGTGGACACGCACAAGTACGGATTTGCACCCAAGGGTAACTCAGTG
CTCCTGTATCGCAACAAGACCTACCGCAGTTACCAATACTTCATCTACCC
GGACTGGTCCGGTGGTGTTTATGCCTCCCCGTCTGTGGCAGGTTCCCGTC
CCGGTGCACTGATTGCCGGGTGCTGGGCCAGTCTGATGAGCGTTGGCGAG
TCTGGCTACATCAAGAGCTGCCTGGACATCATGGGCGCGGCCAAGAAGTT
TGAATCCTCGATCAAAGAGCACCCAGTTCTGTCGAAGAGCTTGGACATTG
TTGGAAAGCCCATGGTCAGCGTTGTTGCCTTCTACAGCAAGAATGATGCC
GTTGATATTTACGATATTGCGGACAGCCTTTCTGCCAAGGGCTGGCATCT
CAATGCGCTTCAGTCGCCCCCGGCAATCCACGTCGCGTTCACTGTCCCTA
CGGCCGCTGCTGTAGATGCACTTACCACCGACCTGGTCGTGGCTGTGGAG
GCGGAGTTGGCAAAGGCGGAAGAGAGGAAGCAGCAAGGCAAGTCGTACGT
TGTTAAGCGTGGAGACACTGCTGCCCTGTACGGCGTGGCCGGCAGCATGC
CGGACAAGAGCATTGTCAGCCGCCTGGCCGAGGGATTCCTGGACACCCTG
TACAAAGCTTAGGTTCTGGCGTTGTTCAATGCCCCGTCCGATGGCGCGGG
TGTCACCACCAGTGGTGGTACGGAGTCGATCATCATGGCGTGCTTGGGTG
CGCGCCAGAAGGCTTTCCTCGAGCGCGGCGTAAAGGAACCGGAAATTCTT
CGAAATATCGTTTTTGTCCTCTTTATCCTTCGCTACGTTCGCAAGACATT
CTATTCTTTGCGCGGTTATGGCATCTTCGGCAGCATCCGCAATGCCTACG
CCGCCGTCCGTCTCTTCTGTTATTCCATCTTCTTGCGGTTCCCTGGCGTC
CGTGGCCAGGTTGATAAGCAGGTTTCCACAGCTATTGAGAATCTTGAATC
GAAACTCGTCGCGTCTGGGCCCGGCGTTAATCGTTATCTGAATCTTCCGA
AGGAAGGATGGACCGCTGAACAGGTTCGCGCTGAGCTCGACAAGCTGGCG
AACATGGAACATACGCGCTGGGAGGATGGTCGTGTCAGTGGTGCTGTCTA
TCACGGTGGACAGGACCTGTTGAAGCTGCAGGCGGAAGCCTTCGGACAGT
TTGGTGTTGCCAACCCCATCCACCCTGATGTGTTCCCTGGTGTTCGGAAG
ATGGAGGCCGAAGTCGTGGCTATGATGGCATCTTCTTTACTTCCCGTCGC
CCTGCAGAATAAACTGCTGGGCTACAGCAGGGCCCCCAGCACCCAGCTGG
CGGCGGCCCATCTGGACTTGATCATCCCCGATACCGCCCATGCTGCCTTC
ATCAAAGCCTGCAACTACTTCAAGATCAAGCTCCATCGCGTCCCCTGCCC
GGCTCCCGAGTACAAGGTGGACATCCCCTCCGTGCGTCGCCTGATTAACT
CGAACACCGTCTTGATTGTTGGCTCGGCACCCAACTTCCCCCACGGAATT
GTTGATGACATTCCGGCTCTGTCTCGCCTCGCGACGTCCTACAAGATCCC
TCTGCATGTTGACTGCTGCCTTGGCTCCTTTGTTGTTGCCTTCTTGAAGA
AGGCGGGCTTTGCCTCGCCCTATGAAGAGGAAGGTGGCTTTGATTTCCGC
CTCCCTGGTGTGACTAGCATCAGTGTGGACACGCACAAGTACGGATTTGC
ACCCAAGGGTAACTCAGTGCTCCTGTATCGCAACAAGACCTACCGCAGTT
ACCAATACTTCATCTACCCGGACTGGTCCGGTGGTGTTTATGCCTCCCCG
TCTGTGGCAGGTTCCCGTCCCGGTGCACTGATTGCCGGGTGCTGGGCCAG
TCTGATGAGCGTTGGCGAGTCTGGCTACATCAAGAGCTGCCTGGACATCA
TGGGCGCGGCCAAGAAGTTTGAATCCTCGATCAAAGAGCACCCAGTTCTG
TCGAAGAGCTTGGACATTGTTGGAAAGCCCATGGTCAGCGTTGTTGCCTT
CTACAGCAAGAATGATGCCGTTGATATTTACGATATTGCGGACAGCCTTT
CTGCCAAGGGCTGGCATCTCAATGCGCTTCAGTCGCCCCCGGCAATCCAC
GTCGCGTTCACTGTCCCTACGGCCGCTGCTGTAGATGCACTTACCACCGA
CCTGGTCGTGGCTGTGGAGGCGGAGTTGGCAAAGGCGGAAGAGAGGAAGC
AGCAAGGCAAGTCGTACGTTGTTAAGCGTGGAGACACTGCTGCCCTGTAC
GGCGTGGCCGGCAGCATGCCGGACAAGAGCATTGTCAGCCGCCTGGCCGA
GGGATTCCTGGACACCCTGTACAAAGCTTAGGTTCTGGCGTTGTTCAATG
CCCCGTCCGATGGCGCGGGTGTCACCACCAGTGGTGGTACGGAGTCGATC
ATCATGGCGTGCTTGGGTGCGCGCCAGAAGGCTTTCCTCGAGCGCGGCGT
AAAGGAACCGGAAATTCTTCGAAATATCGTTTTTGTCCTCTTTATCCTTC
GCTACGTTCGCAAGACATTCTATTCTTTGCGCGGTTATGGCATCTTCGGC
AGCATCCGCAATGCCTACGCCGCCGTCCGTCTCTTCTGTTATTCCATCTT
CTTGCGGTTCCCTGGCGTCCGTGGCCAGGTTGATAAGCAGGTTTCCACAG
CTATTGAGAATCTTGAATCGAAACTCGTCGCGTCTGGGCCCGGCGTTAAT
CGTTATCTGAATCTTCCGAAGGAAGGATGGACCGCTGAACAGGTTCGCGC
TGAGCTCGACAAGCTGGCGAACATGGAACATACGCGCTGGGAGGATGGTC
GTGTCAGTGGTGCTGTCTATCACGGTGGACAGGACCTGTTGAAGCTGCAG
GCGGAAGCCTTCGGACAGTTTGGTGTTGCCAACCCCATCCACCCTGATGT
GTTCCCTGGTGTTCGGAAGATGGAGGCCGAAGTCGTGGCTATGATGGCAT
CTTCTTTACTTCCCGTCGCCCTGCAGAATAAACTGCTGGGCTACAGCAGG
GCCCCCAGCACCCAGCTGGCGGCGGCCCATCTGGACTTGATCATCCCCGA
TACCGCCCATGCTGCCTTCATCAAAGCCTGCAACTACTTCAAGATCAAGC
TCCATCGCGTCCCCTGCCCGGCTCCCGAGTACAAGGTGGACATCCCCTCC
GTGCGTCGCCTGATTAACTCGAACACCGTCTTGATTGTTGGCTCGGCACC
CAACTTCCCCCACGGAATTGTTGATGACATTCCGGCTCTGTCTCGCCTCG
CGACGTCCTACAAGATCCCTCTGCATGTTGACTGCTGCCTTGGCTCCTTT
GTTGTTGCCTTCTTGAAGAAGGCGGGCTTTGCCTCGCCCTATGAAGAGGA
AGGTGGCTTTGATTTCCGCCTCCCTGGTGTGACTAGCATCAGTGTGGACA
CGCACAAGTACGGATTTGCACCCAAGGGTAACTCAGTGCTCCTGTATCGC
AACAAGACCTACCGCAGTTACCAATACTTCATCTACCCGGACTGGTCCGG
TGGTGTTTATGCCTCCCCGTCTGTGGCAGGTTCCCGTCCCGGTGCACTGA
TTGCCGGGTGCTGGGCCAGTCTGATGAGCGTTGGCGAGTCTGGCTACATC
AAGAGCTGCCTGGACATCATGGGCGCGGCCAAGAAGTTTGAATCCTCGAT
CAAAGAGCACCCAGTTCTGTCGAAGAGCTTGGACATTGTTGGAAAGCCCA
TGGTCAGCGTTGTTGCCTTCTACAGCAAGAATGATGCCGTTGATATTTAC
GATATTGCGGACAGCCTTTCTGCCAAGGGCTGGCATCTCAATGCGCTTCA
GTCGCCCCCGGCAATCCACGTCGCGTTCACTGTCCCTACGGCCGCTGCTG
TAGATGCACTTACCACCGACCTGGTCGTGGCTGTGGAGGCGGAGTTGGCA
AAGGCGGAAGAGAGGAAGCAGCAAGGCAAGTCGTACGTTGTTAAGCGTGG
AGACACTGCTGCCCTGTACGGCGTGGCCGGCAGCATGCCGGACAAGAGCA
TTGTCAGCCGCCTGGCCGAGGGATTCCTGGACACCCTGTACAAAGCTTAG
GTTCTGGCGTTGTTCAATGCCCCGTCCGATGGCGCGGGTGTCACCACCAG
TGGTGGTACGGAGTCGATCATCATGGCGTGCTTGGGTGCGCGCCAGAAGG
CTTTCCTCGAGCGCGGCGTAAAGGAACCGGAAATTCTTCGAAATATCGTT
TTTGTCCTCTTTATCCTTCGCTACGTTCGCAAGACATTCTATTCTTTGCG
CGGTTATGGCATCTTCGGCAGCATCCGCAATGCCTACGCCGCCGTCCGTC
TCTTCTGTTATTCCATCTTCTTGCGGTTCCCTGGCGTCCGTGGCCAGGTT
GATAAGCAGGTTTCCACAGCTATTGAGAATCTTGAATCGAAACTCGTCGC
GTCTGGGCCCGGCGTTAATCGTTATCTGAATCTTCCGAAGGAAGGATGGA
CCGCTGAACAGGTTCGCGCTGAGCTCGACAAGCTGGCGAACATGGAACAT
ACGCGCTGGGAGGATGGTCGTGTCAGTGGTGCTGTCTATCACGGTGGACA
GGACCTGTTGAAGCTGCAGGCGGAAGCCTTCGGACAGTTTGGTGTTGCCA
ACCCCATCCACCCTGATGTGTTCCCTGGTGTTCGGAAGATGGAGGCCGAA
GTCGTGGCTATGATGGCATCTTCTTTACTTCCCGTCGCCCTGCAGAATAA
ACTGCTGGGCTACAGCAGGGCCCCCAGCACCCAGCTGGCGGCGGCCCATC
TGGACTTGATCATCCCCGATACCGCCCATGCTGCCTTCATCAAAGCCTGC
AACTACTTCAAGATCAAGCTCCATCGCGTCCCCTGCCCGGCTCCCGAGTA
CAAGGTGGACATCCCCTCCGTGCGTCGCCTGATTAACTCGAACACCGTCT
TGATTGTTGGCTCGGCACCCAACTTCCCCCACGGAATTGTTGATGACATT
CCGGCTCTGTCTCGCCTCGCGACGTCCTACAAGATCCCTCTGCATGTTGA
CTGCTGCCTTGGCTCCTTTGTTGTTGCCTTCTTGAAGAAGGCGGGCTTTG
CCTCGCCCTATGAAGAGGAAGGTGGCTTTGATTTCCGCCTCCCTGGTGTG
ACTAGCATCAGTGTGGACACGCACAAGTACGGATTTGCACCCAAGGGTAA
CTCAGTGCTCCTGTATCGCAACAAGACCTACCGCAGTTACCAATACTTCA
TCTACCCGGACTGGTCCGGTGGTGTTTATGCCTCCCCGTCTGTGGCAGGT
TCCCGTCCCGGTGCACTGATTGCCGGGTGCTGGGCCAGTCTGATGAGCGT
TGGCGAGTCTGGCTACATCAAGAGCTGCCTGGACATCATGGGCGCGGCCA
AGAAGTTTGAATCCTCGATCAAAGAGCACCCAGTTCTGTCGAAGAGCTTG
GACATTGTTGGAAAGCCCATGGTCAGCGTTGTTGCCTTCTACAGCAAGAA
TGATGCCGTTGATATTTACGATATTGCGGACAGCCTTTCTGCCAAGGGCT
GGCATCTCAATGCGCTTCAGTCGCCCCCGGCAATCCACGTCGCGTTCACT
GTCCCTACGGCCGCTGCTGTAGATGCACTTACCACCGACCTGGTCGTGGC
TGTGGAGGCGGAGTTGGCAAAGGCGGAAGAGAGGAAGCAGCAAGGCAAGT
CGTACGTTGTTAAGCGTGGAGACACTGCTGCCCTGTACGGCGTGGCCGGC
AGCATGCCGGACAAGAGCATTGTCAGCCGCCTGGCCGAGGGATTCCTGGA
CACCCTGTACAAAGCTTAGGTTCTGGCGTTGTTCAATGCCCCGTCCGATG
GCGCGGGTGTCACCACCAGTGGTGGTACGGAGTCGATCATCATGGCGTGC
TTGGGTGCGCGCCAGAAGGCTTTCCTCGAGCGCGGCGTAAAGGAACCGGA
AATTCTTCGAAATATCGTTTTTGTCCTCTTTATCCTTCGCTACGTTCGCA
AGACATTCTATTCTTTGCGCGGTTATGGCATCTTCGGCAGCATCCGCAAT
GCCTACGCCGCCGTCCGTCTCTTCTGTTATTCCATCTTCTTGCGGTTCCC
TGGCGTCCGTGGCCAGGTTGATAAGCAGGTTTCCACAGCTATTGAGAATC
TTGAATCGAAACTCGTCGCGTCTGGGCCCGGCGTTAATCGTTATCTGAAT
CTTCCGAAGGAAGGATGGACCGCTGAACAGGTTCGCGCTGAGCTCGACAA
GCTGGCGAACATGGAACATACGCGCTGGGAGGATGGTCGTGTCAGTGGTG
CTGTCTATCACGGTGGACAGGACCTGTTGAAGCTGCAGGCGGAAGCCTTC
GGACAGTTTGGTGTTGCCAACCCCATCCACCCTGATGTGTTCCCTGGTGT
TCGGAAGATGGAGGCCGAAGTCGTGGCTATGATGGCATCTTCTTTACTTC
CCGTCGCCCTGCAGAATAAACTGCTGGGCTACAGCAGGGCCCCCAGCACC
CAGCTGGCGGCGGCCCATCTGGACTT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0019752 | carboxylic acid metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0030170 | pyridoxal phosphate binding |
| GO:0016831 | carboxy-lyase activity |
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_4.6 |
| Note | SMCOG1180: pyridoxal-dependent |
| Note | SMCOG1180:Decarboxylase |
| DBxref | InterPro:IPR015424 |
| DBxref | InterPro:IPR002129 |
| DBxref | InterPro:IPR015422 |
| DBxref | InterPro:IPR015421 |
| DBxref | PFAM:PF00282 |
| Product | putative secondary metabolism biosynthetic enzyme |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:1535804..1537741 - |
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