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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:1642928..1643705+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003478-T1 ID=CBS51388_003478-T1|Name=CBS51388_003478-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=778bp|location=Sequence derived from alignment at An04:1642928..1643705+ (Aspergillus niger CBS 513.88)
ATGGGACTAACCCGCCCCTACCTCCTCCTCTACAACGCCCTCTCCCTAAC
CCTCTGGGCAACATGCACCATCCGCGGCCTCTCCCTCCTCCCATCCACCA
GCATCCCCAAGATATTCAATGATGTCTACACCACCCTCCTAACAACCCAA
TCCCTCGCCCTCCTCGAGATCCTCCACAGTCTGCTCCGTCTCGTCCGCGC
CCCGGTCCTCACTACCGCTATGCAGGTCGCTAGTCGCATACTTCTCGTTT
GGGGCATCATGTATCCGTTCCAGGGCGTTCTCGTGGGTGGAAGTGAGGAG
GCGGGGCTTGGTGACTATGCGTTCCTGGGTTGTTTGAGCGCCTGGGGTGT
TACTGAGTGTATTCGCTATGGGTTCTTTGCGTTGCAGTTGTCCGGAGTGG
GTGTGCCGGGGTGGTGGGCTTGGTTGAGGTATGTTTCTATTTCATGTTTC
ATTTGTGTGTTTGGTGGAGTAAATGCTAATGTGTGTGTGTTTGTGTGAAG
GTATAATACGTTCTATGTGCTCTATCCGCTGGGTATTACGAGTGAGTGTG
TTATGGTGTTTAAGGCGTTGGGGCCGGCGGGGGAGTTGGTGAGTCCGCTG
TATAAGTGGTTCTTGGTCGCGGTGTTGGGGATTTATGTTCCTGGTGAGTT
TATCTTCTTCCTTGGGGGAGATGGTTGAGGTTTATTGCTGATCAAGGGCG
TGTGCTAATTGTTTAGGATCGTATATTTTGTATACGCATATGATTGCACA
GAGGCGCAAGGCGATGAAGAAGAAATAA back to topCoding sequence (CDS) from alignment at An04:1642928..1643705+ >CBS51388_003478-T1 ID=CBS51388_003478-T1|Name=CBS51388_003478-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1899bp|location=Sequence derived from alignment at An04:1642928..1643705+ (Aspergillus niger CBS 513.88)
ATGGGACTAACCCGCCCCTACCTCCTCCTCTACAACGCCCTCTCCCTAAC
CCTCTGGGCAACATGCACCATCCGCGGCCTCTCCCTCCTCCCATCCACCA
GCATCCCCAAGATATTCAATGATGTCTACACCACCCTCCTAACAACCCAA
TCCCTCGCCCTCCTCGAGATCCTCCACAGTCTGCTCCGTCTCGTCCGCGC
CCCGGTCCTCACTACCGCTATGCAGGTCGCTAGTCGCATACTTCTCGTTT
GGGGCATCATGTATCCGTTCCAGGGCGTTCTCGTGGGTGGAAGTGAGGAG
GCGGGGCTTGGTGACTATGCGTTCCTGGGTTGTTTGAGCGCCTGGGGTGT
TACTGAGTGTATTCGCTATGGGTTCTTTGCGTTGCAGTTGTCCGGAGTGG
GTGTGCCGGGGTGGTGGGCTTGGTTGAGGTATAATACGTTCTATGTGCTC
TATCCGCTGGGTATTACGAGTGAGTGTGTTATGGTGTTTAAGGCGTTGGG
GCCGGCGGGGGAGTTGGTGAGTCCGCTGTATAAGTGGTTCTTGGTCGCGG
TGTTGGGGATTTATGTTCCTGGATCGTATATTTTGTATACGCATATGATT
GCACAGAGGCGCAAGGCGATGAAGAAGAAATAAATGGGACTAACCCGCCC
CTACCTCCTCCTCTACAACGCCCTCTCCCTAACCCTCTGGGCAACATGCA
CCATCCGCGGCCTCTCCCTCCTCCCATCCACCAGCATCCCCAAGATATTC
AATGATGTCTACACCACCCTCCTAACAACCCAATCCCTCGCCCTCCTCGA
GATCCTCCACAGTCTGCTCCGTCTCGTCCGCGCCCCGGTCCTCACTACCG
CTATGCAGGTCGCTAGTCGCATACTTCTCGTTTGGGGCATCATGTATCCG
TTCCAGGGCGTTCTCGTGGGTGGAAGTGAGGAGGCGGGGCTTGGTGACTA
TGCGTTCCTGGGTTGTTTGAGCGCCTGGGGTGTTACTGAGTGTATTCGCT
ATGGGTTCTTTGCGTTGCAGTTGTCCGGAGTGGGTGTGCCGGGGTGGTGG
GCTTGGTTGAGGTATAATACGTTCTATGTGCTCTATCCGCTGGGTATTAC
GAGTGAGTGTGTTATGGTGTTTAAGGCGTTGGGGCCGGCGGGGGAGTTGG
TGAGTCCGCTGTATAAGTGGTTCTTGGTCGCGGTGTTGGGGATTTATGTT
CCTGGATCGTATATTTTGTATACGCATATGATTGCACAGAGGCGCAAGGC
GATGAAGAAGAAATAAATGGGACTAACCCGCCCCTACCTCCTCCTCTACA
ACGCCCTCTCCCTAACCCTCTGGGCAACATGCACCATCCGCGGCCTCTCC
CTCCTCCCATCCACCAGCATCCCCAAGATATTCAATGATGTCTACACCAC
CCTCCTAACAACCCAATCCCTCGCCCTCCTCGAGATCCTCCACAGTCTGC
TCCGTCTCGTCCGCGCCCCGGTCCTCACTACCGCTATGCAGGTCGCTAGT
CGCATACTTCTCGTTTGGGGCATCATGTATCCGTTCCAGGGCGTTCTCGT
GGGTGGAAGTGAGGAGGCGGGGCTTGGTGACTATGCGTTCCTGGGTTGTT
TGAGCGCCTGGGGTGTTACTGAGTGTATTCGCTATGGGTTCTTTGCGTTG
CAGTTGTCCGGAGTGGGTGTGCCGGGGTGGTGGGCTTGGTTGAGGTATAA
TACGTTCTATGTGCTCTATCCGCTGGGTATTACGAGTGAGTGTGTTATGG
TGTTTAAGGCGTTGGGGCCGGCGGGGGAGTTGGTGAGTCCGCTGTATAAG
TGGTTCTTGGTCGCGGTGTTGGGGATTTATGTTCCTGGATCGTATATTTT
GTATACGCATATGATTGCACAGAGGCGCAAGGCGATGAAGAAGAAATAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007482 |
| DBxref | PFAM:PF04387 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:1642928..1643705 + |
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