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CBS51388_003508-T1, CBS51388_003508-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_003508-T1
Unique NameCBS51388_003508-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An04:1763524..1765256-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_003508-T1 ID=CBS51388_003508-T1|Name=CBS51388_003508-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1733bp|location=Sequence derived from alignment at An04:1763524..1765256- (Aspergillus niger CBS 513.88)
ATGGCGGACGCGAGCTTCTACACTCGCGCCCAAGAGCTGTTAACTGCCGC
TTTGAATAAATCGCCAAAACCGCCGATAATCGTGGACGATATCCATGTCA
CCGAACTAAATCTCGGTTCTATCCCGCCGGAGCTGGAGATCTTGGAAATC
GGAGACTTGGCTGAGGATCGCTTTCGAGGCATCTTTAAGATGTCTTATAC
GGGCGATGCCTTTCTGACCCTGAAAACCCGCGTCCAAGCAAATCCGCTCA
ATACCTATCTTCTCACCCGACCGTCCTTTGCGACTCCCTTACCGGTCGCT
GCAGCGTATGTGTTGTTGGATTACCCTAATACGCAGCCAAGCGCATCCTT
GCTGACCTGATCGCCATGAATTGCAGAACTCCGTTGACTATTCCTCTTCA
AATCACCCTTTCCGACTTCAAACTTTCCGGCTTCGTCATATTAGTCTTTT
CGAAGCAAAAAGGCATTACAGTCGTCTTCCGAAATGACCCCCTTGAATCA
CTCAAAGTATCATCGACATTCGATTCGATTCCCTTCGTGCGCGACTTTCT
ACAGCGAGAAATAGAAGGCCAGCTTCGCGTTTTGTTCATGGATGAGTTGC
CCGCCATCATCCATCGGCTGTCTCTCCGATTATGGGTTCCAGAATACCGG
GCTGGAGAGGAAATGGCGAACCGTGCCACCAACACCGCAGGTGAGGGGCC
TGGCCAGGACCCCTTGGCGAGTCCTCCACAGGATCCTGTAGATGCTCAAG
GCAACGCTTTGGATGAATCGGAGATCGCTTCACTTTCCTTGGATTCCTCG
GTCGAGACGCACTCCTTGTTCTCACAGAAGAACCTGCTACGTCTGGCCGC
ACTTACGGACTCCCAGCGAACGCTATCGCTGTTTACTCCGTCTATTCAAG
AAGTGGTTTACCGCGCATGGACTTCGCCTTCTGATGCGGGCGAAGTTTCG
GGTGGCGTCATGTCTCCCCTGAGCCCAGTACTTTCCCGGACCCAATCCCA
AGTCGGCGGGATGTCGTCTTTCCATGATACAGCCAGCATGGTGTCCTCAC
AGACTCGGTCTTCGACGAACACCCACACTTTCAGCAGCTACGGTCTGAGC
TTGGGAGCCGGTCGTCACTCGAAATCCAATGCTCGCAGGCGGAAGAAGCG
CGTGGTGGACCTGCGTCGTCCCAAGACTACTGAGGATGCCGTCAGTGTGA
GCGGCGAGAGCACTTATACGGAGACTACCAGCGCACCGTCTATCTGCTCT
GCACCTTTGCCGGTGGTCAGCGAACAGACCGATGACCCAGTGACTCCCCC
GTTGTCTCCGGACAGTGAACTCCACCTTCCTACGGTTCCCGAACGACACC
GCTTGAGTATTTCCAGGCAGATGCCCCGCCGCGATATTGCGACTGAAATG
TTGCGTGAGACCGGAGAGTCGTCGGCTCAGCCGGTCAACCATTCGGCGGT
TGATGTTAACGCTACTCCGCGGGTGGCTGTACACCCCTACATTGCTGCTC
AACATGAGAGCGAGAAGGAAGAAGCAAGCGCCCCACGCCAACTCCCTTCC
AAGGCGCTTCCACTGTCCGATGCCAAGCCGACATCCAGCATCGTTGACCA
AGCGCTGGTTGAACGACTGGCCGGAGAAATTGCTCGTCGCATGCGGGAGG
AGAAATTGACTCCCGGCAATTCGTGCAGTTCGTTCTGGGATCGTCTCAGC
CATGATGATGCCCCCCCGGCGTATGGTCAGTGA
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Coding sequence (CDS) from alignment at An04:1763524..1765256-

>CBS51388_003508-T1 ID=CBS51388_003508-T1|Name=CBS51388_003508-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3324bp|location=Sequence derived from alignment at An04:1763524..1765256- (Aspergillus niger CBS 513.88)
AACTCCGTTGACTATTCCTCTTCAAATCACCCTTTCCGACTTCAAACTTT
CCGGCTTCGTCATATTAGTCTTTTCGAAGCAAAAAGGCATTACAGTCGTC
TTCCGAAATGACCCCCTTGAATCACTCAAAGTATCATCGACATTCGATTC
GATTCCCTTCGTGCGCGACTTTCTACAGCGAGAAATAGAAGGCCAGCTTC
GCGTTTTGTTCATGGATGAGTTGCCCGCCATCATCCATCGGCTGTCTCTC
CGATTATGGGTTCCAGAATACCGGGCTGGAGAGGAAATGGCGAACCGTGC
CACCAACACCGCAGGTGAGGGGCCTGGCCAGGACCCCTTGGCGAGTCCTC
CACAGGATCCTGTAGATGCTCAAGGCAACGCTTTGGATGAATCGGAGATC
GCTTCACTTTCCTTGGATTCCTCGGTCGAGACGCACTCCTTGTTCTCACA
GAAGAACCTGCTACGTCTGGCCGCACTTACGGACTCCCAGCGAACGCTAT
CGCTGTTTACTCCGTCTATTCAAGAAGTGGTTTACCGCGCATGGACTTCG
CCTTCTGATGCGGGCGAAGTTTCGGGTGGCGTCATGTCTCCCCTGAGCCC
AGTACTTTCCCGGACCCAATCCCAAGTCGGCGGGATGTCGTCTTTCCATG
ATACAGCCAGCATGGTGTCCTCACAGACTCGGTCTTCGACGAACACCCAC
ACTTTCAGCAGCTACGGTCTGAGCTTGGGAGCCGGTCGTCACTCGAAATC
CAATGCTCGCAGGCGGAAGAAGCGCGTGGTGGACCTGCGTCGTCCCAAGA
CTACTGAGGATGCCGTCAGTGTGAGCGGCGAGAGCACTTATACGGAGACT
ACCAGCGCACCGTCTATCTGCTCTGCACCTTTGCCGGTGGTCAGCGAACA
GACCGATGACCCAGTGACTCCCCCGTTGTCTCCGGACAGTGAACTCCACC
TTCCTACGGTTCCCGAACGACACCGCTTGAGTATTTCCAGGCAGATGCCC
CGCCGCGATATTGCGACTGAAATGTTGCGTGAGACCGGAGAGTCGTCGGC
TCAGCCGGTCAACCATTCGGCGGTTGATGTTAACGCTACTCCGCGGGTGG
CTGTACACCCCTACATTGCTGCTCAACATGAGAGCGAGAAGGAAGAAGCA
AGCGCCCCACGCCAACTCCCTTCCAAGGCGCTTCCACTGTCCGATGCCAA
GCCGACATCCAGCATCGTTGACCAAGCGCTGGTTGAACGACTGGCCGGAG
AAATTGCTCGTCGCATGCGGGAGGAGAAATTGACTCCCGGCAATTCGTGC
AGTTCGTTCTGGGATCGTCTCAGCCATGATGATGCCCCCCCGGCGTATGG
TCAGTGAATGGCGGACGCGAGCTTCTACACTCGCGCCCAAGAGCTGTTAA
CTGCCGCTTTGAATAAATCGCCAAAACCGCCGATAATCGTGGACGATATC
CATGTCACCGAACTAAATCTCGGTTCTATCCCGCCGGAGCTGGAGATCTT
GGAAATCGGAGACTTGGCTGAGGATCGCTTTCGAGGCATCTTTAAGATGT
CTTATACGGGCGATGCCTTTCTGACCCTGAAAACCCGCGTCCAAGCAAAT
CCGCTCAATACCTATCTTCTCACCCGACCGTCCTTTGCGACTCCCTTACC
GGTCGCTGCAGCAACTCCGTTGACTATTCCTCTTCAAATCACCCTTTCCG
ACTTCAAACTTTCCGGCTTCGTCATATTAGTCTTTTCGAAGCAAAAAGGC
ATTACAGTCGTCTTCCGAAATGACCCCCTTGAATCACTCAAAGTATCATC
GACATTCGATTCGATTCCCTTCGTGCGCGACTTTCTACAGCGAGAAATAG
AAGGCCAGCTTCGCGTTTTGTTCATGGATGAGTTGCCCGCCATCATCCAT
CGGCTGTCTCTCCGATTATGGGTTCCAGAATACCGGGCTGGAGAGGAAAT
GGCGAACCGTGCCACCAACACCGCAGGTGAGGGGCCTGGCCAGGACCCCT
TGGCGAGTCCTCCACAGGATCCTGTAGATGCTCAAGGCAACGCTTTGGAT
GAATCGGAGATCGCTTCACTTTCCTTGGATTCCTCGGTCGAGACGCACTC
CTTGTTCTCACAGAAGAACCTGCTACGTCTGGCCGCACTTACGGACTCCC
AGCGAACGCTATCGCTGTTTACTCCGTCTATTCAAGAAGTGGTTTACCGC
GCATGGACTTCGCCTTCTGATGCGGGCGAAGTTTCGGGTGGCGTCATGTC
TCCCCTGAGCCCAGTACTTTCCCGGACCCAATCCCAAGTCGGCGGGATGT
CGTCTTTCCATGATACAGCCAGCATGGTGTCCTCACAGACTCGGTCTTCG
ACGAACACCCACACTTTCAGCAGCTACGGTCTGAGCTTGGGAGCCGGTCG
TCACTCGAAATCCAATGCTCGCAGGCGGAAGAAGCGCGTGGTGGACCTGC
GTCGTCCCAAGACTACTGAGGATGCCGTCAGTGTGAGCGGCGAGAGCACT
TATACGGAGACTACCAGCGCACCGTCTATCTGCTCTGCACCTTTGCCGGT
GGTCAGCGAACAGACCGATGACCCAGTGACTCCCCCGTTGTCTCCGGACA
GTGAACTCCACCTTCCTACGGTTCCCGAACGACACCGCTTGAGTATTTCC
AGGCAGATGCCCCGCCGCGATATTGCGACTGAAATGTTGCGTGAGACCGG
AGAGTCGTCGGCTCAGCCGGTCAACCATTCGGCGGTTGATGTTAACGCTA
CTCCGCGGGTGGCTGTACACCCCTACATTGCTGCTCAACATGAGAGCGAG
AAGGAAGAAGCAAGCGCCCCACGCCAACTCCCTTCCAAGGCGCTTCCACT
GTCCGATGCCAAGCCGACATCCAGCATCGTTGACCAAGCGCTGGTTGAAC
GACTGGCCGGAGAAATTGCTCGTCGCATGCGGGAGGAGAAATTGACTCCC
GGCAATTCGTGCAGTTCGTTCTGGGATCGTCTCAGCCATGATGATGCCCC
CCCGGCGTATGGTCAGTGAATGGCGGACGCGAGCTTCTACACTCGCGCCC
AAGAGCTGTTAACTGCCGCTTTGAATAAATCGCCAAAACCGCCGATAATC
GTGGACGATATCCATGTCACCGAACTAAATCTCGGTTCTATCCCGCCGGA
GCTGGAGATCTTGGAAATCGGAGACTTGGCTGAGGATCGCTTTCGAGGCA
TCTTTAAGATGTCTTATACGGGCGATGCCTTTCTGACCCTGAAAACCCGC
GTCCAAGCAAATCCGCTCAATACCTATCTTCTCACCCGACCGTCCTTTGC
GACTCCCTTACCGGTCGCTGCAGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0032865ERMES complex
Vocabulary: Biological Process
TermDefinition
GO:0007005mitochondrion organization
Vocabulary: Molecular Function
TermDefinition
GO:0008289lipid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MDM34CBS51388_003508Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003508-T1CBS51388_003508-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003508-T1.cdsCBS51388_003508-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003508-T1.exon2CBS51388_003508-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_003508-T1.exon1CBS51388_003508-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG09261S0S
DBxrefInterPro:IPR027536
DBxrefInterPro:IPR031468
ProductERMES complex subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An04supercontigAn04:1763524..1765256 -
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