You are here

Home

CBS51388_003520-T1, CBS51388_003520-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_003520-T1
Unique NameCBS51388_003520-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An04:1793665..1794429+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_003520-T1 ID=CBS51388_003520-T1|Name=CBS51388_003520-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=765bp|location=Sequence derived from alignment at An04:1793665..1794429+ (Aspergillus niger CBS 513.88)
ATGGCTTCTACAATGCTTGCATCTTTCCCTGGCGCTGCTACCAGCTACAC
AACCTCCCATCTGAATAAGGACCCGGCTCCATTACTGGCTGAAAATGACA
ACTATACATTTGAGCAGCTGGTTCATGACTTGAGAAGCTACCTGGGTAGC
TCTCGAGGCATTGATGGCGAGAATGTCGACCACAAGGTTCTGATTGCCTT
CATGTCCAAATACGCTTCCAATCCCAATGACTGGTCACGATTTGCACGCA
ACGATGTGAGCAAGAACTATACTCGCAACCTGGTGGAGGATATCAATGGT
CGTGCCAACCTGGTTAGTTCTTTACTTGCAAACCATTGTGGTGGTTGACG
ATTAACACGTTCCCAGTTGGTTCTGGTCTGGAACCCCCAAAAAGGCTCGC
CCATCCATGATCACGCAAATGCTCACTGCATCATGAAGATTCTCGGGGGA
GAATTGAATGAAGTGATATACGATACGCCAGATCCCGCACGAGGCCATGA
TGCGCCTTTGACGGTCAAGCAAGAGACGACGTACAAGACCGATGAAGTTG
CGTATATCTGTGACCAGATCGGACTGCATAGGGTCATGAATCCCCAGAAA
GATCAGGTTGCTGTTTCTTTGCACTGTAAGTTGGCCTCCACCCTGCTAAA
ACCATGGTTGTCTGACGCTTCTGCAGTGTATACGCCGCCCAATGCTGCGG
ACTTTGGGTACAACATCTATGATCGCGAAACTGGTCGGAGCAGCCATGTT
TATCAGGCGTCCTAG
back to top

Coding sequence (CDS) from alignment at An04:1793665..1794429+

>CBS51388_003520-T1 ID=CBS51388_003520-T1|Name=CBS51388_003520-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1980bp|location=Sequence derived from alignment at An04:1793665..1794429+ (Aspergillus niger CBS 513.88)
ATGGCTTCTACAATGCTTGCATCTTTCCCTGGCGCTGCTACCAGCTACAC
AACCTCCCATCTGAATAAGGACCCGGCTCCATTACTGGCTGAAAATGACA
ACTATACATTTGAGCAGCTGGTTCATGACTTGAGAAGCTACCTGGGTAGC
TCTCGAGGCATTGATGGCGAGAATGTCGACCACAAGGTTCTGATTGCCTT
CATGTCCAAATACGCTTCCAATCCCAATGACTGGTCACGATTTGCACGCA
ACGATGTGAGCAAGAACTATACTCGCAACCTGGTGGAGGATATCAATGGT
CGTGCCAACCTGTTGGTTCTGGTCTGGAACCCCCAAAAAGGCTCGCCCAT
CCATGATCACGCAAATGCTCACTGCATCATGAAGATTCTCGGGGGAGAAT
TGAATGAAGTGATATACGATACGCCAGATCCCGCACGAGGCCATGATGCG
CCTTTGACGGTCAAGCAAGAGACGACGTACAAGACCGATGAAGTTGCGTA
TATCTGTGACCAGATCGGACTGCATAGGGTCATGAATCCCCAGAAAGATC
AGGTTGCTGTTTCTTTGCACTTGTATACGCCGCCCAATGCTGCGGACTTT
GGGTACAACATCTATGATCGCGAAACTGGTCGGAGCAGCCATGTTTATCA
GGCGTCCTAGATGGCTTCTACAATGCTTGCATCTTTCCCTGGCGCTGCTA
CCAGCTACACAACCTCCCATCTGAATAAGGACCCGGCTCCATTACTGGCT
GAAAATGACAACTATACATTTGAGCAGCTGGTTCATGACTTGAGAAGCTA
CCTGGGTAGCTCTCGAGGCATTGATGGCGAGAATGTCGACCACAAGGTTC
TGATTGCCTTCATGTCCAAATACGCTTCCAATCCCAATGACTGGTCACGA
TTTGCACGCAACGATGTGAGCAAGAACTATACTCGCAACCTGGTGGAGGA
TATCAATGGTCGTGCCAACCTGTTGGTTCTGGTCTGGAACCCCCAAAAAG
GCTCGCCCATCCATGATCACGCAAATGCTCACTGCATCATGAAGATTCTC
GGGGGAGAATTGAATGAAGTGATATACGATACGCCAGATCCCGCACGAGG
CCATGATGCGCCTTTGACGGTCAAGCAAGAGACGACGTACAAGACCGATG
AAGTTGCGTATATCTGTGACCAGATCGGACTGCATAGGGTCATGAATCCC
CAGAAAGATCAGGTTGCTGTTTCTTTGCACTTGTATACGCCGCCCAATGC
TGCGGACTTTGGGTACAACATCTATGATCGCGAAACTGGTCGGAGCAGCC
ATGTTTATCAGGCGTCCTAGATGGCTTCTACAATGCTTGCATCTTTCCCT
GGCGCTGCTACCAGCTACACAACCTCCCATCTGAATAAGGACCCGGCTCC
ATTACTGGCTGAAAATGACAACTATACATTTGAGCAGCTGGTTCATGACT
TGAGAAGCTACCTGGGTAGCTCTCGAGGCATTGATGGCGAGAATGTCGAC
CACAAGGTTCTGATTGCCTTCATGTCCAAATACGCTTCCAATCCCAATGA
CTGGTCACGATTTGCACGCAACGATGTGAGCAAGAACTATACTCGCAACC
TGGTGGAGGATATCAATGGTCGTGCCAACCTGTTGGTTCTGGTCTGGAAC
CCCCAAAAAGGCTCGCCCATCCATGATCACGCAAATGCTCACTGCATCAT
GAAGATTCTCGGGGGAGAATTGAATGAAGTGATATACGATACGCCAGATC
CCGCACGAGGCCATGATGCGCCTTTGACGGTCAAGCAAGAGACGACGTAC
AAGACCGATGAAGTTGCGTATATCTGTGACCAGATCGGACTGCATAGGGT
CATGAATCCCCAGAAAGATCAGGTTGCTGTTTCTTTGCACTTGTATACGC
CGCCCAATGCTGCGGACTTTGGGTACAACATCTATGATCGCGAAACTGGT
CGGAGCAGCCATGTTTATCAGGCGTCCTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016702oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0005506iron ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_003520CBS51388_003520Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003520-T1.exon1CBS51388_003520-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_003520-T1.exon2CBS51388_003520-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_003520-T1.exon3CBS51388_003520-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003520-T1.cdsCBS51388_003520-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003520-T1CBS51388_003520-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011051
DBxrefInterPro:IPR014710
DBxrefInterPro:IPR010300
DBxrefPFAM:PF05995
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An04supercontigAn04:1793665..1794429 +
Powered by Drupal