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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:1797915..1798804- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003522-T1 ID=CBS51388_003522-T1|Name=CBS51388_003522-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=890bp|location=Sequence derived from alignment at An04:1797915..1798804- (Aspergillus niger CBS 513.88)
ATGCCCTCAGCGACAGGAACCAAGCGTGTCAGAGTGAGTTCATCCCTCTT
TAAGATCATACACCAGACCGACCGATTAATCCATTACTATACAGGGCGTT
TCTGTCTTCCGGCCATTCGGTATGCCTCTACTTACCATTATTCCCCATAT
TTGAAACTTAATCCGGTCCTAACAACCCACCAGTCTTCGGCAGCGAAGCC
CAACCCTTCGACCCAGCCAAGAAACCCCCCAACGTCCCAGCCGACCACAC
GCACCAGTGGCGCGTATTCGTCAAAGGCGTCAACGGCGAAGACATCTCCT
ACTGGCTAAAGAAAGTGCAATTTAAGCTCCACGAGACTTACGCACAGAAC
GTGCGGACGATCGAACAGGCCCCCTTCGAAGTCACCGAGACCGGATGGGG
TGAATTCGAGATTCAAATCAAGCTATATTTTGTTCCGGAATCGACCGAGA
AGCCGCAGACTCTATGGCATAGTTTGAAGTTGCACCCCTATGGGCCGGAC
GCGGAAGCGAAGAAGGAGCGCCGCGAGCTGGTAATCAGTCAGAACTATGA
GGAGGTGGTGTTCAATGAGCCTGTGGAGCAGTTTTATGAGCTCTTGACGG
GTGGTACGGGCGCAGCAGGGCAACCGCAGAAGGGGAAGGGTGGCAAGAAT
ACCAAGCAGGCGCAGCAGCAGCAGAAGGGGGTAAGGACGGCTGAGATTCC
GGTTAATTCGTCCGCGGACAATCCGTATAGTCGGACGACGGAGAGTAGTG
AAATGGATCGGTTAGGGGAGGCGAATAAGACAGTCGAGCAGATGATCAAA
CAGGAGAGGGAACGATTGATTGAGCGGGAGAAGAGGTTGGCGGAATTGCG
TGCGAGTGAGGGCGTGCCGGCTACTACGAAGAAGCGTTAA back to topCoding sequence (CDS) from alignment at An04:1797915..1798804- >CBS51388_003522-T1 ID=CBS51388_003522-T1|Name=CBS51388_003522-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2295bp|location=Sequence derived from alignment at An04:1797915..1798804- (Aspergillus niger CBS 513.88)
TCTTCGGCAGCGAAGCCCAACCCTTCGACCCAGCCAAGAAACCCCCCAAC
GTCCCAGCCGACCACACGCACCAGTGGCGCGTATTCGTCAAAGGCGTCAA
CGGCGAAGACATCTCCTACTGGCTAAAGAAAGTGCAATTTAAGCTCCACG
AGACTTACGCACAGAACGTGCGGACGATCGAACAGGCCCCCTTCGAAGTC
ACCGAGACCGGATGGGGTGAATTCGAGATTCAAATCAAGCTATATTTTGT
TCCGGAATCGACCGAGAAGCCGCAGACTCTATGGCATAGTTTGAAGTTGC
ACCCCTATGGGCCGGACGCGGAAGCGAAGAAGGAGCGCCGCGAGCTGGTA
ATCAGTCAGAACTATGAGGAGGTGGTGTTCAATGAGCCTGTGGAGCAGTT
TTATGAGCTCTTGACGGGTGGTACGGGCGCAGCAGGGCAACCGCAGAAGG
GGAAGGGTGGCAAGAATACCAAGCAGGCGCAGCAGCAGCAGAAGGGGGTA
AGGACGGCTGAGATTCCGGTTAATTCGTCCGCGGACAATCCGTATAGTCG
GACGACGGAGAGTAGTGAAATGGATCGGTTAGGGGAGGCGAATAAGACAG
TCGAGCAGATGATCAAACAGGAGAGGGAACGATTGATTGAGCGGGAGAAG
AGGTTGGCGGAATTGCGTGCGAGTGAGGGCGTGCCGGCTACTACGAAGAA
GCGTTAAGGCGTTTCTGTCTTCCGGCCATTCGATGCCCTCAGCGACAGGA
ACCAAGCGTGTCAGATCTTCGGCAGCGAAGCCCAACCCTTCGACCCAGCC
AAGAAACCCCCCAACGTCCCAGCCGACCACACGCACCAGTGGCGCGTATT
CGTCAAAGGCGTCAACGGCGAAGACATCTCCTACTGGCTAAAGAAAGTGC
AATTTAAGCTCCACGAGACTTACGCACAGAACGTGCGGACGATCGAACAG
GCCCCCTTCGAAGTCACCGAGACCGGATGGGGTGAATTCGAGATTCAAAT
CAAGCTATATTTTGTTCCGGAATCGACCGAGAAGCCGCAGACTCTATGGC
ATAGTTTGAAGTTGCACCCCTATGGGCCGGACGCGGAAGCGAAGAAGGAG
CGCCGCGAGCTGGTAATCAGTCAGAACTATGAGGAGGTGGTGTTCAATGA
GCCTGTGGAGCAGTTTTATGAGCTCTTGACGGGTGGTACGGGCGCAGCAG
GGCAACCGCAGAAGGGGAAGGGTGGCAAGAATACCAAGCAGGCGCAGCAG
CAGCAGAAGGGGGTAAGGACGGCTGAGATTCCGGTTAATTCGTCCGCGGA
CAATCCGTATAGTCGGACGACGGAGAGTAGTGAAATGGATCGGTTAGGGG
AGGCGAATAAGACAGTCGAGCAGATGATCAAACAGGAGAGGGAACGATTG
ATTGAGCGGGAGAAGAGGTTGGCGGAATTGCGTGCGAGTGAGGGCGTGCC
GGCTACTACGAAGAAGCGTTAAGGCGTTTCTGTCTTCCGGCCATTCGATG
CCCTCAGCGACAGGAACCAAGCGTGTCAGATCTTCGGCAGCGAAGCCCAA
CCCTTCGACCCAGCCAAGAAACCCCCCAACGTCCCAGCCGACCACACGCA
CCAGTGGCGCGTATTCGTCAAAGGCGTCAACGGCGAAGACATCTCCTACT
GGCTAAAGAAAGTGCAATTTAAGCTCCACGAGACTTACGCACAGAACGTG
CGGACGATCGAACAGGCCCCCTTCGAAGTCACCGAGACCGGATGGGGTGA
ATTCGAGATTCAAATCAAGCTATATTTTGTTCCGGAATCGACCGAGAAGC
CGCAGACTCTATGGCATAGTTTGAAGTTGCACCCCTATGGGCCGGACGCG
GAAGCGAAGAAGGAGCGCCGCGAGCTGGTAATCAGTCAGAACTATGAGGA
GGTGGTGTTCAATGAGCCTGTGGAGCAGTTTTATGAGCTCTTGACGGGTG
GTACGGGCGCAGCAGGGCAACCGCAGAAGGGGAAGGGTGGCAAGAATACC
AAGCAGGCGCAGCAGCAGCAGAAGGGGGTAAGGACGGCTGAGATTCCGGT
TAATTCGTCCGCGGACAATCCGTATAGTCGGACGACGGAGAGTAGTGAAA
TGGATCGGTTAGGGGAGGCGAATAAGACAGTCGAGCAGATGATCAAACAG
GAGAGGGAACGATTGATTGAGCGGGAGAAGAGGTTGGCGGAATTGCGTGC
GAGTGAGGGCGTGCCGGCTACTACGAAGAAGCGTTAAGGCGTTTCTGTCT
TCCGGCCATTCGATGCCCTCAGCGACAGGAACCAAGCGTGTCAGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262UTQ |
| DBxref | InterPro:IPR005033 |
| DBxref | InterPro:IPR038704 |
| DBxref | PFAM:PF03366 |
| Product | NuA4 histone H4 acetyltransferase complex and the SWR1 complex subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:1797915..1798804 - |
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