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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:1812908..1813604- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003526-T1 ID=CBS51388_003526-T1|Name=CBS51388_003526-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=697bp|location=Sequence derived from alignment at An04:1812908..1813604- (Aspergillus niger CBS 513.88)
ATGTCCGTTTCCGCCCAGGCCGCAGCTCGCTGCTGCAGACAGATCGTCCG
CCCTACCGCTTCTCTGCGCCTTGCTCCCACGACATACCTGTCCCAGCGCA
CACTCAGCCGGAGATGGCAATCCACTGAGGCGGAGGCTGCTGCTGCTCCT
GCCAACCCCAAGATCACCCAGATTGTCGACCAGATCAGCCAATTGACCCT
GCTTGAGACCGCCGACCTTGTGTCCACCCTGAAGGTGCGTTGTTTTGCAT
CCCCGGATCTGTGTCGCAAACTCCGCACCGTGCCCGTTTTGGGCTGTATT
CCATCCATTGTGGTGGATTGATGCTTGTCGAATCACATTGAGCTCGATAC
TGACTTGCACATTGTCATCTTAGACCCGCCTGAACATCCCCGACCTGCCC
GTTGGCGGTTTCGCCGTGGGCGCTGCTCCCGCCGCTCCCGCCGCTGCTGA
GGAAGAGGAGGCTGCTCCCGCCCAGCAGGAGAAGACCCTTTTCAACCTGA
AGCTCGAGTCCGTTGACGCCTCCTCCAAGGCCAAGGTCATCAAGGAGATC
AAGACCCTCCTCGGCCTGTCCCTGGTCGACAGCAAGAAGTTCGTCGAGTC
CGTTCCCAAGGTCCTGAAGGAGTCTGTGCCCAAGGAGGAGGCCGAGAAGA
TCGTGGAGACCCTCAAGGCCGTGGGCGCCAAGGCCACTATGGACTAA back to topCoding sequence (CDS) from alignment at An04:1812908..1813604- >CBS51388_003526-T1 ID=CBS51388_003526-T1|Name=CBS51388_003526-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1116bp|location=Sequence derived from alignment at An04:1812908..1813604- (Aspergillus niger CBS 513.88)
ACCCGCCTGAACATCCCCGACCTGCCCGTTGGCGGTTTCGCCGTGGGCGC
TGCTCCCGCCGCTCCCGCCGCTGCTGAGGAAGAGGAGGCTGCTCCCGCCC
AGCAGGAGAAGACCCTTTTCAACCTGAAGCTCGAGTCCGTTGACGCCTCC
TCCAAGGCCAAGGTCATCAAGGAGATCAAGACCCTCCTCGGCCTGTCCCT
GGTCGACAGCAAGAAGTTCGTCGAGTCCGTTCCCAAGGTCCTGAAGGAGT
CTGTGCCCAAGGAGGAGGCCGAGAAGATCGTGGAGACCCTCAAGGCCGTG
GGCGCCAAGGCCACTATGGACTAAATGTCCGTTTCCGCCCAGGCCGCAGC
TCGCTGCTGCAGACAGATCGTCCGCCCTACCGCTTCTCTGCGCCTTGCTC
CCACGACATACCTGTCCCAGCGCACACTCAGCCGGAGATGGCAATCCACT
GAGGCGGAGGCTGCTGCTGCTCCTGCCAACCCCAAGATCACCCAGATTGT
CGACCAGATCAGCCAATTGACCCTGCTTGAGACCGCCGACCTTGTGTCCA
CCCTGAAGACCCGCCTGAACATCCCCGACCTGCCCGTTGGCGGTTTCGCC
GTGGGCGCTGCTCCCGCCGCTCCCGCCGCTGCTGAGGAAGAGGAGGCTGC
TCCCGCCCAGCAGGAGAAGACCCTTTTCAACCTGAAGCTCGAGTCCGTTG
ACGCCTCCTCCAAGGCCAAGGTCATCAAGGAGATCAAGACCCTCCTCGGC
CTGTCCCTGGTCGACAGCAAGAAGTTCGTCGAGTCCGTTCCCAAGGTCCT
GAAGGAGTCTGTGCCCAAGGAGGAGGCCGAGAAGATCGTGGAGACCCTCA
AGGCCGTGGGCGCCAAGGCCACTATGGACTAAATGTCCGTTTCCGCCCAG
GCCGCAGCTCGCTGCTGCAGACAGATCGTCCGCCCTACCGCTTCTCTGCG
CCTTGCTCCCACGACATACCTGTCCCAGCGCACACTCAGCCGGAGATGGC
AATCCACTGAGGCGGAGGCTGCTGCTGCTCCTGCCAACCCCAAGATCACC
CAGATTGTCGACCAGATCAGCCAATTGACCCTGCTTGAGACCGCCGACCT
TGTGTCCACCCTGAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265HPJ |
| DBxref | InterPro:IPR036235 |
| DBxref | InterPro:IPR000206 |
| DBxref | InterPro:IPR008932 |
| DBxref | InterPro:IPR013823 |
| DBxref | InterPro:IPR014719 |
| DBxref | PFAM:PF16320 |
| DBxref | PFAM:PF00542 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:1812908..1813604 - |
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