You are here

CBS51388_003542-T1, CBS51388_003542-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_003542-T1
Unique NameCBS51388_003542-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An04:1864914..1865812-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_003542-T1 ID=CBS51388_003542-T1|Name=CBS51388_003542-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=899bp|location=Sequence derived from alignment at An04:1864914..1865812- (Aspergillus niger CBS 513.88)
ATGAATATGACGAGTCCACTCAGCCAGTCGACAGATCGTCCGCTGATACA GAAAGAGAGACGCACCGCATCTGGATCAACTCCTCTCCCCACAGTCCCTG AAGCCGCGTCCGTCGCATCAACTCCCGAACTGCAACAAGGGGAATTCAAC CCGGCTGATGGAGCAAAGCCATCCTCTCCTTTTTATCGCCATGCCACACC ATCACTAGCCATCGACCGACTGAAAAAGGCCGCCAAAGCGACAACGACGA GATACAGCCCCCTTGATCCCGAAGACCCGCCGACGCTTCACCGACAGCCA GTGGAATCTACAAGCCATCGTGAGTCGAAGCTCTGGGCTCAGAAGAAACG ACGCTGCGGATGGATGCAGAGACTGAGTCGGAAGCAACGCATGGCGGTTA AGGCTACGATTGCCGTCGTGACAGTTGGAACCATGGTTGCGATCGCGCTG GGGATTACTGCTGCTGTTGGAGGGGCTGTGTGGAAGTCTGATACCCAACA GGTGGTGATTGGGAGATAGGTTGATGGCTGGTGGTCAGTCTGGTGTGGGT TTGGCATGCCAAACATGTGTGTAGGGGTTTAAGCCTCTCTCACTGATTGC TCCAGATACACAACGCGTGATTCGGGCGAACTGGAACTGCGGTGCAAACA GGCGTCATGGGCTAGGGATGATAATCAAGGGTCGGAAAGGAGTTGCAAAG GGTATGGGGTTGTCCTTCTGTGTACATGTGAGTGAAACGGCAGGGAAAAC TTGTACATAAGTCGCCATGACACACGCTCCAGGCTGTGGATACACGTATG GCGTTGAATGGATGGACTTTGATAGACCTCTTCCAATCTTGCGAGAGGTG GAAGCAGTTGGTGCCTGACCCTGTTGGGGGCGGGTGCCTGGCTGCCTGA
back to top

Coding sequence (CDS) from alignment at An04:1864914..1865812-

>CBS51388_003542-T1 ID=CBS51388_003542-T1|Name=CBS51388_003542-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1674bp|location=Sequence derived from alignment at An04:1864914..1865812- (Aspergillus niger CBS 513.88)
GCTGTGGATACACGTATGGCGTTGAATGGATGGACTTTGATAGACCTCTT
CCAATCTTGCGAGAGGTGGAAGCAGTTGGTGCCTGACCCTGTTGGGGGCG
GGTGCCTGGCTGCCTGAATACACAACGCGTGATTCGGGCGAACTGGAACT
GCGGTGCAAACAGGCGTCATGGGCTAGGGATGATAATCAAGGGTCGGAAA
GGAGTTGCAAAGGGTATGGGGTTGTCCTTCTGTGTACATATGAATATGAC
GAGTCCACTCAGCCAGTCGACAGATCGTCCGCTGATACAGAAAGAGAGAC
GCACCGCATCTGGATCAACTCCTCTCCCCACAGTCCCTGAAGCCGCGTCC
GTCGCATCAACTCCCGAACTGCAACAAGGGGAATTCAACCCGGCTGATGG
AGCAAAGCCATCCTCTCCTTTTTATCGCCATGCCACACCATCACTAGCCA
TCGACCGACTGAAAAAGGCCGCCAAAGCGACAACGACGAGATACAGCCCC
CTTGATCCCGAAGACCCGCCGACGCTTCACCGACAGCCAGTGGAATCTAC
AAGCCATCGCTGTGGATACACGTATGGCGTTGAATGGATGGACTTTGATA
GACCTCTTCCAATCTTGCGAGAGGTGGAAGCAGTTGGTGCCTGACCCTGT
TGGGGGCGGGTGCCTGGCTGCCTGAATACACAACGCGTGATTCGGGCGAA
CTGGAACTGCGGTGCAAACAGGCGTCATGGGCTAGGGATGATAATCAAGG
GTCGGAAAGGAGTTGCAAAGGGTATGGGGTTGTCCTTCTGTGTACATATG
AATATGACGAGTCCACTCAGCCAGTCGACAGATCGTCCGCTGATACAGAA
AGAGAGACGCACCGCATCTGGATCAACTCCTCTCCCCACAGTCCCTGAAG
CCGCGTCCGTCGCATCAACTCCCGAACTGCAACAAGGGGAATTCAACCCG
GCTGATGGAGCAAAGCCATCCTCTCCTTTTTATCGCCATGCCACACCATC
ACTAGCCATCGACCGACTGAAAAAGGCCGCCAAAGCGACAACGACGAGAT
ACAGCCCCCTTGATCCCGAAGACCCGCCGACGCTTCACCGACAGCCAGTG
GAATCTACAAGCCATCGCTGTGGATACACGTATGGCGTTGAATGGATGGA
CTTTGATAGACCTCTTCCAATCTTGCGAGAGGTGGAAGCAGTTGGTGCCT
GACCCTGTTGGGGGCGGGTGCCTGGCTGCCTGAATACACAACGCGTGATT
CGGGCGAACTGGAACTGCGGTGCAAACAGGCGTCATGGGCTAGGGATGAT
AATCAAGGGTCGGAAAGGAGTTGCAAAGGGTATGGGGTTGTCCTTCTGTG
TACATATGAATATGACGAGTCCACTCAGCCAGTCGACAGATCGTCCGCTG
ATACAGAAAGAGAGACGCACCGCATCTGGATCAACTCCTCTCCCCACAGT
CCCTGAAGCCGCGTCCGTCGCATCAACTCCCGAACTGCAACAAGGGGAAT
TCAACCCGGCTGATGGAGCAAAGCCATCCTCTCCTTTTTATCGCCATGCC
ACACCATCACTAGCCATCGACCGACTGAAAAAGGCCGCCAAAGCGACAAC
GACGAGATACAGCCCCCTTGATCCCGAAGACCCGCCGACGCTTCACCGAC
AGCCAGTGGAATCTACAAGCCATC
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_003542CBS51388_003542Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003542-T1CBS51388_003542-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003542-T1.cdsCBS51388_003542-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003542-T1.exon3CBS51388_003542-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_003542-T1.exon2CBS51388_003542-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_003542-T1.exon1CBS51388_003542-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An04supercontigAn04:1864914..1865812 -