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CBS51388_003587-T1, CBS51388_003587-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_003587-T1
Unique NameCBS51388_003587-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An04:2017892..2019473-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_003587-T1 ID=CBS51388_003587-T1|Name=CBS51388_003587-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1582bp|location=Sequence derived from alignment at An04:2017892..2019473- (Aspergillus niger CBS 513.88)
ATGCCCGATATTGAGGATCAAACCGAGAAGCGATCTTCTCCAGTCCAGTC
CCCCGCCTCCAGCACCACCACCGTTGCTGCCCTCTACCCGGAAACCGATC
TCGACAAGGGCATCATCGGCTGGGACAGTCAAGATGACCCCAGCAACCCG
CAAAACTTTTCTCCGAAACGCAAATGGATGCTCCTCGCCCTGATGAGCTC
CTTTACCTTCATCTCGCCGCTGGCGTCGAGCATGTTCTCCCCCGCCATCA
GCTACGTGGCCGCCGACTTTCGCGTCACCAATGAAACCCTCCTCTCCTTC
AGTGTCACCATCTTCCTCCTCGGCTATACCGTATGCTTCCCACTACACCA
TCAATCCCTCCCCACATCTAAAGCTATCCCCATACTAATGACCCCAGGTC
GGCCCCCTCTTCCTCGCCCCCCTTAGCGAAATCTACGGCCGCCGCATCAC
TTTAAGCGTTGCAAACTGGTTCTTCGTCGTCTGGCAAATCGGCTGCGCCC
TCGCCCCAAACCTTTCCAGCCTGATTGTCTTCCGTCTCTTCGCCGGCATG
GGTGGCGTGGGCTGCATCACCCTCGGCGCCGGTGTCATCGCCGACCTCTT
TCCCACCACCCAGCGCGGCATGGCCACCTCCATCTGGGCTATGGGCCCCT
TAATCGGCCCCGTCGTTGGCCCCATTGCGGGTGGCTTCATCGGCGAAACC
ATCGGCTGGCGATGGGTATTCTGGATCCTGCTCATCACCAGCGGCACCAT
CGGCGCCAGCATCGAGCTCCTCAACCGCGAAACTTACGCCCCTGTCCTAA
TCCGCTGGAAAACAGCCAAGCTCGCACGCGAACTCAACCGTCCTGAGCTC
CGCAGCGCCTACGACATCTCCCAAGGCACCACGCCCCCGACCGTCTCTCA
AGCACTAATGCAAGGCCTCCGCCGCCCCATCATCCTCATCTGCAAGAGCC
CCATCGTCCTCCTCCTCTCCGTCTACATGGCCTTCGTCTACGGCCTCCTC
TACCTCTTCTTCACGACCATCACCACCGTCTTCGAAGGCGTCTACGGCTT
CTCGACCGGCCTTGCAGGCCTCTCCTACCTAGGTATCGGAGTAGGCTTCT
TCATCGGCATGGCCGCCGTCGCAATGACGAGTGACCGCATGGTCATCAAA
CTCACCGCCCGCAACAACGGCGTCTTCCAACCCGAGATGCGTCTCCCCAC
CATGATCATCTTCGCCTGCTTCCTTCCTATCAGCTTCTTTTGGTACGGCT
GGTCCGCTAAGTACGAGGCTATGTGGATCGTGCCGATCATTGGTATGGCG
CCGTTCGGCATCGGCATGATAGGCATATATATGCCGATTCAGATGTACGT
GATCGATTGTTATCCGGCGTATGCGGCGAGTGCGAATGCCGCGTTGACGG
CCACGAGATCGTTGGTCGGTTCGGTGTTGCCGCTTGCTGGGCCGAAGCTC
TTCAGTAGTTTGGGGCTCGGGTGGGGGAACTCGTTGCTGGGGTTTTTGGC
GTTGGCGTTTGTGCCGGTGCCGATTTTGTTTAATCGCTATGGGCAGACAA
TTCGCGAGAGGTGGGTTGTGAGGTTGGATTAG
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Coding sequence (CDS) from alignment at An04:2017892..2019473-

>CBS51388_003587-T1 ID=CBS51388_003587-T1|Name=CBS51388_003587-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3030bp|location=Sequence derived from alignment at An04:2017892..2019473- (Aspergillus niger CBS 513.88)
GTCGGCCCCCTCTTCCTCGCCCCCCTTAGCGAAATCTACGGCCGCCGCAT
CACTTTAAGCGTTGCAAACTGGTTCTTCGTCGTCTGGCAAATCGGCTGCG
CCCTCGCCCCAAACCTTTCCAGCCTGATTGTCTTCCGTCTCTTCGCCGGC
ATGGGTGGCGTGGGCTGCATCACCCTCGGCGCCGGTGTCATCGCCGACCT
CTTTCCCACCACCCAGCGCGGCATGGCCACCTCCATCTGGGCTATGGGCC
CCTTAATCGGCCCCGTCGTTGGCCCCATTGCGGGTGGCTTCATCGGCGAA
ACCATCGGCTGGCGATGGGTATTCTGGATCCTGCTCATCACCAGCGGCAC
CATCGGCGCCAGCATCGAGCTCCTCAACCGCGAAACTTACGCCCCTGTCC
TAATCCGCTGGAAAACAGCCAAGCTCGCACGCGAACTCAACCGTCCTGAG
CTCCGCAGCGCCTACGACATCTCCCAAGGCACCACGCCCCCGACCGTCTC
TCAAGCACTAATGCAAGGCCTCCGCCGCCCCATCATCCTCATCTGCAAGA
GCCCCATCGTCCTCCTCCTCTCCGTCTACATGGCCTTCGTCTACGGCCTC
CTCTACCTCTTCTTCACGACCATCACCACCGTCTTCGAAGGCGTCTACGG
CTTCTCGACCGGCCTTGCAGGCCTCTCCTACCTAGGTATCGGAGTAGGCT
TCTTCATCGGCATGGCCGCCGTCGCAATGACGAGTGACCGCATGGTCATC
AAACTCACCGCCCGCAACAACGGCGTCTTCCAACCCGAGATGCGTCTCCC
CACCATGATCATCTTCGCCTGCTTCCTTCCTATCAGCTTCTTTTGGTACG
GCTGGTCCGCTAAGTACGAGGCTATGTGGATCGTGCCGATCATTGGTATG
GCGCCGTTCGGCATCGGCATGATAGGCATATATATGCCGATTCAGATGTA
CGTGATCGATTGTTATCCGGCGTATGCGGCGAGTGCGAATGCCGCGTTGA
CGGCCACGAGATCGTTGGTCGGTTCGGTGTTGCCGCTTGCTGGGCCGAAG
CTCTTCAGTAGTTTGGGGCTCGGGTGGGGGAACTCGTTGCTGGGGTTTTT
GGCGTTGGCGTTTGTGCCGGTGCCGATTTTGTTTAATCGCTATGGGCAGA
CAATTCGCGAGAGGTGGGTTGTGAGGTTGGATTAGATGCCCGATATTGAG
GATCAAACCGAGAAGCGATCTTCTCCAGTCCAGTCCCCCGCCTCCAGCAC
CACCACCGTTGCTGCCCTCTACCCGGAAACCGATCTCGACAAGGGCATCA
TCGGCTGGGACAGTCAAGATGACCCCAGCAACCCGCAAAACTTTTCTCCG
AAACGCAAATGGATGCTCCTCGCCCTGATGAGCTCCTTTACCTTCATCTC
GCCGCTGGCGTCGAGCATGTTCTCCCCCGCCATCAGCTACGTGGCCGCCG
ACTTTCGCGTCACCAATGAAACCCTCCTCTCCTTCAGTGTCACCATCTTC
CTCCTCGGCTATACCGTCGGCCCCCTCTTCCTCGCCCCCCTTAGCGAAAT
CTACGGCCGCCGCATCACTTTAAGCGTTGCAAACTGGTTCTTCGTCGTCT
GGCAAATCGGCTGCGCCCTCGCCCCAAACCTTTCCAGCCTGATTGTCTTC
CGTCTCTTCGCCGGCATGGGTGGCGTGGGCTGCATCACCCTCGGCGCCGG
TGTCATCGCCGACCTCTTTCCCACCACCCAGCGCGGCATGGCCACCTCCA
TCTGGGCTATGGGCCCCTTAATCGGCCCCGTCGTTGGCCCCATTGCGGGT
GGCTTCATCGGCGAAACCATCGGCTGGCGATGGGTATTCTGGATCCTGCT
CATCACCAGCGGCACCATCGGCGCCAGCATCGAGCTCCTCAACCGCGAAA
CTTACGCCCCTGTCCTAATCCGCTGGAAAACAGCCAAGCTCGCACGCGAA
CTCAACCGTCCTGAGCTCCGCAGCGCCTACGACATCTCCCAAGGCACCAC
GCCCCCGACCGTCTCTCAAGCACTAATGCAAGGCCTCCGCCGCCCCATCA
TCCTCATCTGCAAGAGCCCCATCGTCCTCCTCCTCTCCGTCTACATGGCC
TTCGTCTACGGCCTCCTCTACCTCTTCTTCACGACCATCACCACCGTCTT
CGAAGGCGTCTACGGCTTCTCGACCGGCCTTGCAGGCCTCTCCTACCTAG
GTATCGGAGTAGGCTTCTTCATCGGCATGGCCGCCGTCGCAATGACGAGT
GACCGCATGGTCATCAAACTCACCGCCCGCAACAACGGCGTCTTCCAACC
CGAGATGCGTCTCCCCACCATGATCATCTTCGCCTGCTTCCTTCCTATCA
GCTTCTTTTGGTACGGCTGGTCCGCTAAGTACGAGGCTATGTGGATCGTG
CCGATCATTGGTATGGCGCCGTTCGGCATCGGCATGATAGGCATATATAT
GCCGATTCAGATGTACGTGATCGATTGTTATCCGGCGTATGCGGCGAGTG
CGAATGCCGCGTTGACGGCCACGAGATCGTTGGTCGGTTCGGTGTTGCCG
CTTGCTGGGCCGAAGCTCTTCAGTAGTTTGGGGCTCGGGTGGGGGAACTC
GTTGCTGGGGTTTTTGGCGTTGGCGTTTGTGCCGGTGCCGATTTTGTTTA
ATCGCTATGGGCAGACAATTCGCGAGAGGTGGGTTGTGAGGTTGGATTAG
ATGCCCGATATTGAGGATCAAACCGAGAAGCGATCTTCTCCAGTCCAGTC
CCCCGCCTCCAGCACCACCACCGTTGCTGCCCTCTACCCGGAAACCGATC
TCGACAAGGGCATCATCGGCTGGGACAGTCAAGATGACCCCAGCAACCCG
CAAAACTTTTCTCCGAAACGCAAATGGATGCTCCTCGCCCTGATGAGCTC
CTTTACCTTCATCTCGCCGCTGGCGTCGAGCATGTTCTCCCCCGCCATCA
GCTACGTGGCCGCCGACTTTCGCGTCACCAATGAAACCCTCCTCTCCTTC
AGTGTCACCATCTTCCTCCTCGGCTATACC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_003587CBS51388_003587Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003587-T1CBS51388_003587-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003587-T1.cdsCBS51388_003587-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003587-T1.exon2CBS51388_003587-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_003587-T1.exon1CBS51388_003587-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An04supercontigAn04:2017892..2019473 -
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