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CBS51388_003608-T1, CBS51388_003608-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_003608-T1
Unique NameCBS51388_003608-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An04:2085477..2087288+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_003608-T1 ID=CBS51388_003608-T1|Name=CBS51388_003608-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1812bp|location=Sequence derived from alignment at An04:2085477..2087288+ (Aspergillus niger CBS 513.88)
ATGCCACCGCAAAAGCGCAAGGCATCAAGCAGTTCTGCCACCAATGGTGC
CTCGTCGCACACCAATAAACGCGAAAAGCCCGATCTTACGCGTCCGCATC
CCCATGCCAAAGATACCGAAGACTTCGGTATCGTCCTGCGTGACTTCTAC
CCCCCTGAGATGTGCAACGAACGGTGCGAGGCGTACAATAACGGAACGCT
GGAACGACCCATCGAATCCCTACATAGGGCATACGAAGACACGTTTGATG
AACGTCAAAAAATCCGGCCCAATGCAGCCGTCGTTCACTGGTTCAAAACA
GATCTTCGGCTACATGACAATCGCGGCCTACAGATGGCATATCAGGTTGC
GCGAGAACACAAACTGCCTCTCGTCGGCTTGTATATTCTCTCTCCGGAGG
ACCTGACAGCTCATTTGTCTAGTGCTCCTCGTGTGGATCTGATGTTGCGA
ACACTAGAATTGTTGCGGCGAGACTTGAGTGAGCTGGATATTCCTTTGTA
TATGGAAACGCAGGAAAAGAGGAATGATATTCCTCAAAGGATTATAGATC
TATGCCAGGAGTGGGGCGCGACTCACCTCTTTGCAAACCTGGAATATGAA
GTCGACGAATTGCGTCGCGAGGCGAAATTAGTACGACTCTGCGCAAGGAA
TGGCATACGATTTGAAGCCGCACATGATACATGCGTTGTCACTCCGGGCA
AGCTAGTCAGCCAACAGGGGAAGCAGTATGCCGTTTATAGTCCGTGGTTT
CGCGCCTGGTGTGCCTTCCTCAATGAGAACCCAGAATACCTTGAGGTCGC
GGACGAACCAGGGTCGAACCCCGGCGATGCACGCAAGCACTTCAAGACCC
TCTTTGGCTGCGAGGTGCCTGTTGCACCGGAGAACAAGCGGCTCTCGGAG
GAAGAAAAGACAAGATTCAGGGAGCTGTATCCAGAGGGCGAGCATGAGGC
ACTCCGTAGGCTGGAGGCGTTTCTGGAGGAGAAAGCAAATGACTATGATG
ACTTGCGAAACACACTCGCGGGGCGGAATACATCCGTGCTAAGTCCCTAT
TTCGCGTCGGGGTCACTCAGTGCACGAACAGCGGTTTTCCAGGCCCGCAA
AAAGAACAAAGGCCACTTAAAAAGGAATCAGACCGGATATACGTCTTGGA
TTAGCGAAGTTGCCTGGCGAGATTTCTACAAGCATGTCCTGGTCCATTGG
CCATTTATCTGGTTCGTTTTCTCCATTTTGACTGACTATCCGTATAAAGC
TGACCAGTCATCGTACAGTATGAACAAGTGCTTCAAACCTGAGTTCACAA
ACTTAGCGTGGTCATATAACAAAGATCACTTCAATGCCTGGTGCGAGGGC
AAAACTGGCTATCCGATCGTCGACGCCGCCATGCGCCAAATCAAACACGC
CGCCTGGATGCACAATCGCACGCGCATGGTCGTTTCATCATTTCTTTCCA
AAGACCTTCTGATAGATTGGCGTCGAGGGGAGCGATATTTCATGGAAAAC
TTGATAGACGGCGACTTCGCCTCGAACCACGGTGGCTGGGGATTCGGTTC
TAGTACCGGGGTTGATCCCCAACCATATTTCCGGATCTTTAATCCTCTGC
GCCAAAGTGAGCGGTTCGATCCAGAAGGGGAGTATATTCGTCTTTGGGTG
CCGGAGCTACGTGCGATTGAGGGCGCGGCAGTCCATGACCCATATGGCCG
AGGGGCCGGGGATATTGCTGAGAAGAATGGCTATCCAAGGCCGATAGTGG
ATCATTCTGAGAGTCGAGACCGTGCGTTGGAGAATTATAAAAAGGTTGCC
CAGGGCCGTTGA
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Coding sequence (CDS) from alignment at An04:2085477..2087288+

>CBS51388_003608-T1 ID=CBS51388_003608-T1|Name=CBS51388_003608-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3510bp|location=Sequence derived from alignment at An04:2085477..2087288+ (Aspergillus niger CBS 513.88)
ATGCCACCGCAAAAGCGCAAGGCATCAAGCAGTTCTGCCACCAATGGTGC
CTCGTCGCACACCAATAAACGCGAAAAGCCCGATCTTACGCGTCCGCATC
CCCATGCCAAAGATACCGAAGACTTCGGTATCGTCCTGCGTGACTTCTAC
CCCCCTGAGATGTGCAACGAACGGTGCGAGGCGTACAATAACGGAACGCT
GGAACGACCCATCGAATCCCTACATAGGGCATACGAAGACACGTTTGATG
AACGTCAAAAAATCCGGCCCAATGCAGCCGTCGTTCACTGGTTCAAAACA
GATCTTCGGCTACATGACAATCGCGGCCTACAGATGGCATATCAGGTTGC
GCGAGAACACAAACTGCCTCTCGTCGGCTTGTATATTCTCTCTCCGGAGG
ACCTGACAGCTCATTTGTCTAGTGCTCCTCGTGTGGATCTGATGTTGCGA
ACACTAGAATTGTTGCGGCGAGACTTGAGTGAGCTGGATATTCCTTTGTA
TATGGAAACGCAGGAAAAGAGGAATGATATTCCTCAAAGGATTATAGATC
TATGCCAGGAGTGGGGCGCGACTCACCTCTTTGCAAACCTGGAATATGAA
GTCGACGAATTGCGTCGCGAGGCGAAATTAGTACGACTCTGCGCAAGGAA
TGGCATACGATTTGAAGCCGCACATGATACATGCGTTGTCACTCCGGGCA
AGCTAGTCAGCCAACAGGGGAAGCAGTATGCCGTTTATAGTCCGTGGTTT
CGCGCCTGGTGTGCCTTCCTCAATGAGAACCCAGAATACCTTGAGGTCGC
GGACGAACCAGGGTCGAACCCCGGCGATGCACGCAAGCACTTCAAGACCC
TCTTTGGCTGCGAGGTGCCTGTTGCACCGGAGAACAAGCGGCTCTCGGAG
GAAGAAAAGACAAGATTCAGGGAGCTGTATCCAGAGGGCGAGCATGAGGC
ACTCCGTAGGCTGGAGGCGTTTCTGGAGGAGAAAGCAAATGACTATGATG
ACTTGCGAAACACACTCGCGGGGCGGAATACATCCGTGCTAAGTCCCTAT
TTCGCGTCGGGGTCACTCAGTGCACGAACAGCGGTTTTCCAGGCCCGCAA
AAAGAACAAAGGCCACTTAAAAAGGAATCAGACCGGATATACGTCTTGGA
TTAGCGAAGTTGCCTGGCGAGATTTCTACAAGCATGTCCTGGTCCATTGG
CCATTTATCTGTATGAACAAGTGCTTCAAACCTGAGTTCACAAACTTAGC
GTGGTCATATAACAAAGATCACTTCAATGCCTGGTGCGAGGGCAAAACTG
GCTATCCGATCGTCGACGCCGCCATGCGCCAAATCAAACACGCCGCCTGG
ATGCACAATCGCACGCGCATGGTCGTTTCATCATTTCTTTCCAAAGACCT
TCTGATAGATTGGCGTCGAGGGGAGCGATATTTCATGGAAAACTTGATAG
ACGGCGACTTCGCCTCGAACCACGGTGGCTGGGGATTCGGTTCTAGTACC
GGGGTTGATCCCCAACCATATTTCCGGATCTTTAATCCTCTGCGCCAAAG
TGAGCGGTTCGATCCAGAAGGGGAGTATATTCGTCTTTGGGTGCCGGAGC
TACGTGCGATTGAGGGCGCGGCAGTCCATGACCCATATGGCCGAGGGGCC
GGGGATATTGCTGAGAAGAATGGCTATCCAAGGCCGATAGTGGATCATTC
TGAGAGTCGAGACCGTGCGTTGGAGAATTATAAAAAGGTTGCCCAGGGCC
GTTGAATGCCACCGCAAAAGCGCAAGGCATCAAGCAGTTCTGCCACCAAT
GGTGCCTCGTCGCACACCAATAAACGCGAAAAGCCCGATCTTACGCGTCC
GCATCCCCATGCCAAAGATACCGAAGACTTCGGTATCGTCCTGCGTGACT
TCTACCCCCCTGAGATGTGCAACGAACGGTGCGAGGCGTACAATAACGGA
ACGCTGGAACGACCCATCGAATCCCTACATAGGGCATACGAAGACACGTT
TGATGAACGTCAAAAAATCCGGCCCAATGCAGCCGTCGTTCACTGGTTCA
AAACAGATCTTCGGCTACATGACAATCGCGGCCTACAGATGGCATATCAG
GTTGCGCGAGAACACAAACTGCCTCTCGTCGGCTTGTATATTCTCTCTCC
GGAGGACCTGACAGCTCATTTGTCTAGTGCTCCTCGTGTGGATCTGATGT
TGCGAACACTAGAATTGTTGCGGCGAGACTTGAGTGAGCTGGATATTCCT
TTGTATATGGAAACGCAGGAAAAGAGGAATGATATTCCTCAAAGGATTAT
AGATCTATGCCAGGAGTGGGGCGCGACTCACCTCTTTGCAAACCTGGAAT
ATGAAGTCGACGAATTGCGTCGCGAGGCGAAATTAGTACGACTCTGCGCA
AGGAATGGCATACGATTTGAAGCCGCACATGATACATGCGTTGTCACTCC
GGGCAAGCTAGTCAGCCAACAGGGGAAGCAGTATGCCGTTTATAGTCCGT
GGTTTCGCGCCTGGTGTGCCTTCCTCAATGAGAACCCAGAATACCTTGAG
GTCGCGGACGAACCAGGGTCGAACCCCGGCGATGCACGCAAGCACTTCAA
GACCCTCTTTGGCTGCGAGGTGCCTGTTGCACCGGAGAACAAGCGGCTCT
CGGAGGAAGAAAAGACAAGATTCAGGGAGCTGTATCCAGAGGGCGAGCAT
GAGGCACTCCGTAGGCTGGAGGCGTTTCTGGAGGAGAAAGCAAATGACTA
TGATGACTTGCGAAACACACTCGCGGGGCGGAATACATCCGTGCTAAGTC
CCTATTTCGCGTCGGGGTCACTCAGTGCACGAACAGCGGTTTTCCAGGCC
CGCAAAAAGAACAAAGGCCACTTAAAAAGGAATCAGACCGGATATACGTC
TTGGATTAGCGAAGTTGCCTGGCGAGATTTCTACAAGCATGTCCTGGTCC
ATTGGCCATTTATCTGTATGAACAAGTGCTTCAAACCTGAGTTCACAAAC
TTAGCGTGGTCATATAACAAAGATCACTTCAATGCCTGGTGCGAGGGCAA
AACTGGCTATCCGATCGTCGACGCCGCCATGCGCCAAATCAAACACGCCG
CCTGGATGCACAATCGCACGCGCATGGTCGTTTCATCATTTCTTTCCAAA
GACCTTCTGATAGATTGGCGTCGAGGGGAGCGATATTTCATGGAAAACTT
GATAGACGGCGACTTCGCCTCGAACCACGGTGGCTGGGGATTCGGTTCTA
GTACCGGGGTTGATCCCCAACCATATTTCCGGATCTTTAATCCTCTGCGC
CAAAGTGAGCGGTTCGATCCAGAAGGGGAGTATATTCGTCTTTGGGTGCC
GGAGCTACGTGCGATTGAGGGCGCGGCAGTCCATGACCCATATGGCCGAG
GGGCCGGGGATATTGCTGAGAAGAATGGCTATCCAAGGCCGATAGTGGAT
CATTCTGAGAGTCGAGACCGTGCGTTGGAGAATTATAAAAAGGTTGCCCA
GGGCCGTTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_003608CBS51388_003608Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003608-T1.exon1CBS51388_003608-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_003608-T1.exon2CBS51388_003608-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003608-T1.cdsCBS51388_003608-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003608-T1CBS51388_003608-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036134
DBxrefInterPro:IPR036155
DBxrefInterPro:IPR018394
DBxrefInterPro:IPR006050
DBxrefInterPro:IPR014729
DBxrefInterPro:IPR005101
DBxrefInterPro:IPR002081
DBxrefPFAM:PF03441
DBxrefPFAM:PF00875
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An04supercontigAn04:2085477..2087288 +
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