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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:2089184..2091735+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003609-T1 ID=CBS51388_003609-T1|Name=CBS51388_003609-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2552bp|location=Sequence derived from alignment at An04:2089184..2091735+ (Aspergillus niger CBS 513.88)
ATGGATTCTGCCCAGTCGGGGGACGCCCAGGCACCCAACGTTCCAGCTGC
CACCGAAGAACCAACCGGCGAAGCCACAACAAAACGTCGCTGGAGAAGGA
ATCGGATAGCCTGCGACTCCTGCCATTCGCGTCGCGTGCGGTGCGATCGA
GCCTTCCCCTGCTCGCGCTGTCTTCGCAGTGATATCCGGTGTGAATTCAC
TCGCGAACGACGAAAGAGAGGACGCATTGCGCGATCCCGACTGGTAGAGA
CCAAGACTGCTGTAGAGAAGGCGAGCCAGCCTGTGGAGACTCGAGATTCA
GCACCGGCACCTGCAGAAGCAGGGTCTGGCCCAGTTCCAAATGGCTCTCC
TTCCTCAACATTTCACCATAGATCGCCGGCGACAAATGATGTGACGGGGT
CGGCCCCAAGTATCGACGAGCGGCGCTCTCAAGCGGATGTATCACTTCCT
CCCAGAAAGCCAGGGCACACTGTTAATGCGACAGAGGAATGGCTAGCAGG
CACGCATGTCTCTCCAGGATCCTATGAGCCCTTGGCAGGCATCGGCCCCG
GAGAAGGCCCTTTCCCTCGAATCTTTGATATCTGGAATGGGGTCGACTTG
GCCGGTTATAGCGACCCAGCATCTCAAGGCTCCAAGATAACAGGCCTTGG
TCAGACACCAGCACCATCTGCAACGATCCTAAAATATCCGGTCCTCCAGC
CAGTAATGCCCTATCTGGAATCGAGCTTGCCTCGAAAGCTAGTATACGAC
CTCCTCGACCTGTACTTTACAAGCGCGTTTTCCACACATATGCATCCTGT
GTGCCATCACATTCATTGCTATGTCCTACGAAAGGCGTCTTTTCTAAGCC
GAGAGGCTCCTCGACCTAGCAGCCCGGCACTTCTGGCCAGTATGCTTTGG
GTGGCAGCGTTAGACGATCGTGCGTTTGCTTTGCCGATATCTCCACCCCA
GAGAAAGAAAATATGTCAGTTCTTGTGTGCTCTAACATTACGACTTTTGC
GACCGTTGATTCACGTGTCATTCAAAGAGCAAGAAGGCGCCGCCGCGAGT
GACCCACTTCATGCTGCGGTCGGTCAGGATGGCCCTCCTACAACCGTGCA
CCACCCGTTTGAGGTCGGTGGTGATGATCGGGGGTTAGTTGGCCCTGCAG
GATCATTGGACGATGTTATCACATACATCCATGTGGCATCCATCATCTCC
TCAAGCGAGCAAAAGGCCGCCAGCATGCGATGGTTCGTTTTTGTTCAAGT
AACTTGAAGCGAGCACGGAAGCTAACCAATCTTAGGTGGCATGCCGCCTT
TACTCTTGCACGAGAATTGAAGCTGAATCAGGAGATCGAGGTGATGCCCA
GTGAGGAGAATCACCCAGAGGGTTCGAGCCCGTCATTTGATTATTCACTT
GCGGGATGGAGTGGCGTGGACACGGGCCCCTTTTTTGATTATTCAAACCC
TGCCCGGCCAAGCTTGAATTGCGTATGCGACCGTGGCCACGAACTGCGTG
GCGCTATCACCGAAGAGCATCGTGAAGAGCGTCGTCGGACATGGTGGCTC
CTCTACATTATGGACCGTCACCTCGCTCTCTGCTACAATCGCCCCCTTGC
TCTACTCGATGCTGAAAGCGAGGATCTCTTATTGCCTCTGGACGAAGGGT
CATGGCAGTCAGGTAATATCCACAGCAATAGTCCCAAACCGGACGGACCA
CAGTGCCCACTGTCAGGCGAGAAGAACAAGCGCCGCGTTTTCCCTAATTT
CATTTGCCATGATCATTCTATCTTCGGCTTCTTTCTCCCTCTGATGACCA
TTACTGGTGAATTAATCGACCTGAACCAAGCTCGGAACCATCCAATGCTT
GGAGCACGCTTGAACGGAAAGGACCCCTGGGATGCGCACGTTGGTGAAGT
ACTACGCCAGCTTGAGCTTTACAAGGCTAGTCTCACTACGTTTGCAGCCA
CTGCGTCGGATCCCGATGCGCCCTTGTCCAGTGCCTTCCCCCCTAAACCC
GATCAACAACCAGTTGAACCCTCACTCGCCCAGGCTTATTCATGGCATAC
TCAAACGGTCATCTCATATGCATCCTACCTCGTGCATGTGCTGCATATTC
TTCTTGTTGGCAAATGGGATCCTGTGTCGTTGATCGAGGATAAGGACTTC
TGGACTTCATCGCCTGCATTCGCCTCCACCATCTCTCACGCTCTTGATGC
GGCAGACTCAGTGGACCATATCTTACGCTACGACCCCGATATTAGTTTTA
TGCCGTATTTCTTCGGCATTCAATTGCTCCAAGGCAGCTTTCTTCTCCTG
CTGATTGTGGAGCGGCTGCAGAAAGAAGCGGGGGAGGGTATTCTAAATGC
CTGCGAGGTGATGATCCGAGCGACCGAGTCCTGCGTGGTGACGTTGAACA
CTGAATATCAACGGAACTTCCGACAGGTCATGCGGAGCGCCGTTGCGCAG
GCGCGTGGGCGCCCTGTCAATCACAGTGAGATCCGGCATCGTCGCAAGGC
CGTCTTAGCACTTTACCGGTGGACCCGGAAGGGCACTGGGTTGGCTCTTT
AG back to topCoding sequence (CDS) from alignment at An04:2089184..2091735+ >CBS51388_003609-T1 ID=CBS51388_003609-T1|Name=CBS51388_003609-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7173bp|location=Sequence derived from alignment at An04:2089184..2091735+ (Aspergillus niger CBS 513.88)
ATGGATTCTGCCCAGTCGGGGGACGCCCAGGCACCCAACGTTCCAGCTGC
CACCGAAGAACCAACCGGCGAAGCCACAACAAAACGTCGCTGGAGAAGGA
ATCGGATAGCCTGCGACTCCTGCCATTCGCGTCGCGTGCGGTGCGATCGA
GCCTTCCCCTGCTCGCGCTGTCTTCGCAGTGATATCCGGTGTGAATTCAC
TCGCGAACGACGAAAGAGAGGACGCATTGCGCGATCCCGACTGGTAGAGA
CCAAGACTGCTGTAGAGAAGGCGAGCCAGCCTGTGGAGACTCGAGATTCA
GCACCGGCACCTGCAGAAGCAGGGTCTGGCCCAGTTCCAAATGGCTCTCC
TTCCTCAACATTTCACCATAGATCGCCGGCGACAAATGATGTGACGGGGT
CGGCCCCAAGTATCGACGAGCGGCGCTCTCAAGCGGATGTATCACTTCCT
CCCAGAAAGCCAGGGCACACTGTTAATGCGACAGAGGAATGGCTAGCAGG
CACGCATGTCTCTCCAGGATCCTATGAGCCCTTGGCAGGCATCGGCCCCG
GAGAAGGCCCTTTCCCTCGAATCTTTGATATCTGGAATGGGGTCGACTTG
GCCGGTTATAGCGACCCAGCATCTCAAGGCTCCAAGATAACAGGCCTTGG
TCAGACACCAGCACCATCTGCAACGATCCTAAAATATCCGGTCCTCCAGC
CAGTAATGCCCTATCTGGAATCGAGCTTGCCTCGAAAGCTAGTATACGAC
CTCCTCGACCTGTACTTTACAAGCGCGTTTTCCACACATATGCATCCTGT
GTGCCATCACATTCATTGCTATGTCCTACGAAAGGCGTCTTTTCTAAGCC
GAGAGGCTCCTCGACCTAGCAGCCCGGCACTTCTGGCCAGTATGCTTTGG
GTGGCAGCGTTAGACGATCAGCAAGAAGGCGCCGCCGCGAGTGACCCACT
TCATGCTGCGGTCGGTCAGGATGGCCCTCCTACAACCGTGCACCACCCGT
TTGAGGTCGGTGGTGATGATCGGGGGTTAGTTGGCCCTGCAGGATCATTG
GACGATGTTATCACATACATCCATGTGGCATCCATCATCTCCTCAAGCGA
GCAAAAGGCCGCCAGCATGCGATGGTGGCATGCCGCCTTTACTCTTGCAC
GAGAATTGAAGCTGAATCAGGAGATCGAGGTGATGCCCAGTGAGGAGAAT
CACCCAGAGGGTTCGAGCCCGTCATTTGATTATTCACTTGCGGGATGGAG
TGGCGTGGACACGGGCCCCTTTTTTGATTATTCAAACCCTGCCCGGCCAA
GCTTGAATTGCGTATGCGACCGTGGCCACGAACTGCGTGGCGCTATCACC
GAAGAGCATCGTGAAGAGCGTCGTCGGACATGGTGGCTCCTCTACATTAT
GGACCGTCACCTCGCTCTCTGCTACAATCGCCCCCTTGCTCTACTCGATG
CTGAAAGCGAGGATCTCTTATTGCCTCTGGACGAAGGGTCATGGCAGTCA
GGTAATATCCACAGCAATAGTCCCAAACCGGACGGACCACAGTGCCCACT
GTCAGGCGAGAAGAACAAGCGCCGCGTTTTCCCTAATTTCATTTGCCATG
ATCATTCTATCTTCGGCTTCTTTCTCCCTCTGATGACCATTACTGGTGAA
TTAATCGACCTGAACCAAGCTCGGAACCATCCAATGCTTGGAGCACGCTT
GAACGGAAAGGACCCCTGGGATGCGCACGTTGGTGAAGTACTACGCCAGC
TTGAGCTTTACAAGGCTAGTCTCACTACGTTTGCAGCCACTGCGTCGGAT
CCCGATGCGCCCTTGTCCAGTGCCTTCCCCCCTAAACCCGATCAACAACC
AGTTGAACCCTCACTCGCCCAGGCTTATTCATGGCATACTCAAACGGTCA
TCTCATATGCATCCTACCTCGTGCATGTGCTGCATATTCTTCTTGTTGGC
AAATGGGATCCTGTGTCGTTGATCGAGGATAAGGACTTCTGGACTTCATC
GCCTGCATTCGCCTCCACCATCTCTCACGCTCTTGATGCGGCAGACTCAG
TGGACCATATCTTACGCTACGACCCCGATATTAGTTTTATGCCGTATTTC
TTCGGCATTCAATTGCTCCAAGGCAGCTTTCTTCTCCTGCTGATTGTGGA
GCGGCTGCAGAAAGAAGCGGGGGAGGGTATTCTAAATGCCTGCGAGGTGA
TGATCCGAGCGACCGAGTCCTGCGTGGTGACGTTGAACACTGAATATCAA
CGGAACTTCCGACAGGTCATGCGGAGCGCCGTTGCGCAGGCGCGTGGGCG
CCCTGTCAATCACAGTGAGATCCGGCATCGTCGCAAGGCCGTCTTAGCAC
TTTACCGGTGGACCCGGAAGGGCACTGGGTTGGCTCTTTAGATGGATTCT
GCCCAGTCGGGGGACGCCCAGGCACCCAACGTTCCAGCTGCCACCGAAGA
ACCAACCGGCGAAGCCACAACAAAACGTCGCTGGAGAAGGAATCGGATAG
CCTGCGACTCCTGCCATTCGCGTCGCGTGCGGTGCGATCGAGCCTTCCCC
TGCTCGCGCTGTCTTCGCAGTGATATCCGGTGTGAATTCACTCGCGAACG
ACGAAAGAGAGGACGCATTGCGCGATCCCGACTGGTAGAGACCAAGACTG
CTGTAGAGAAGGCGAGCCAGCCTGTGGAGACTCGAGATTCAGCACCGGCA
CCTGCAGAAGCAGGGTCTGGCCCAGTTCCAAATGGCTCTCCTTCCTCAAC
ATTTCACCATAGATCGCCGGCGACAAATGATGTGACGGGGTCGGCCCCAA
GTATCGACGAGCGGCGCTCTCAAGCGGATGTATCACTTCCTCCCAGAAAG
CCAGGGCACACTGTTAATGCGACAGAGGAATGGCTAGCAGGCACGCATGT
CTCTCCAGGATCCTATGAGCCCTTGGCAGGCATCGGCCCCGGAGAAGGCC
CTTTCCCTCGAATCTTTGATATCTGGAATGGGGTCGACTTGGCCGGTTAT
AGCGACCCAGCATCTCAAGGCTCCAAGATAACAGGCCTTGGTCAGACACC
AGCACCATCTGCAACGATCCTAAAATATCCGGTCCTCCAGCCAGTAATGC
CCTATCTGGAATCGAGCTTGCCTCGAAAGCTAGTATACGACCTCCTCGAC
CTGTACTTTACAAGCGCGTTTTCCACACATATGCATCCTGTGTGCCATCA
CATTCATTGCTATGTCCTACGAAAGGCGTCTTTTCTAAGCCGAGAGGCTC
CTCGACCTAGCAGCCCGGCACTTCTGGCCAGTATGCTTTGGGTGGCAGCG
TTAGACGATCAGCAAGAAGGCGCCGCCGCGAGTGACCCACTTCATGCTGC
GGTCGGTCAGGATGGCCCTCCTACAACCGTGCACCACCCGTTTGAGGTCG
GTGGTGATGATCGGGGGTTAGTTGGCCCTGCAGGATCATTGGACGATGTT
ATCACATACATCCATGTGGCATCCATCATCTCCTCAAGCGAGCAAAAGGC
CGCCAGCATGCGATGGTGGCATGCCGCCTTTACTCTTGCACGAGAATTGA
AGCTGAATCAGGAGATCGAGGTGATGCCCAGTGAGGAGAATCACCCAGAG
GGTTCGAGCCCGTCATTTGATTATTCACTTGCGGGATGGAGTGGCGTGGA
CACGGGCCCCTTTTTTGATTATTCAAACCCTGCCCGGCCAAGCTTGAATT
GCGTATGCGACCGTGGCCACGAACTGCGTGGCGCTATCACCGAAGAGCAT
CGTGAAGAGCGTCGTCGGACATGGTGGCTCCTCTACATTATGGACCGTCA
CCTCGCTCTCTGCTACAATCGCCCCCTTGCTCTACTCGATGCTGAAAGCG
AGGATCTCTTATTGCCTCTGGACGAAGGGTCATGGCAGTCAGGTAATATC
CACAGCAATAGTCCCAAACCGGACGGACCACAGTGCCCACTGTCAGGCGA
GAAGAACAAGCGCCGCGTTTTCCCTAATTTCATTTGCCATGATCATTCTA
TCTTCGGCTTCTTTCTCCCTCTGATGACCATTACTGGTGAATTAATCGAC
CTGAACCAAGCTCGGAACCATCCAATGCTTGGAGCACGCTTGAACGGAAA
GGACCCCTGGGATGCGCACGTTGGTGAAGTACTACGCCAGCTTGAGCTTT
ACAAGGCTAGTCTCACTACGTTTGCAGCCACTGCGTCGGATCCCGATGCG
CCCTTGTCCAGTGCCTTCCCCCCTAAACCCGATCAACAACCAGTTGAACC
CTCACTCGCCCAGGCTTATTCATGGCATACTCAAACGGTCATCTCATATG
CATCCTACCTCGTGCATGTGCTGCATATTCTTCTTGTTGGCAAATGGGAT
CCTGTGTCGTTGATCGAGGATAAGGACTTCTGGACTTCATCGCCTGCATT
CGCCTCCACCATCTCTCACGCTCTTGATGCGGCAGACTCAGTGGACCATA
TCTTACGCTACGACCCCGATATTAGTTTTATGCCGTATTTCTTCGGCATT
CAATTGCTCCAAGGCAGCTTTCTTCTCCTGCTGATTGTGGAGCGGCTGCA
GAAAGAAGCGGGGGAGGGTATTCTAAATGCCTGCGAGGTGATGATCCGAG
CGACCGAGTCCTGCGTGGTGACGTTGAACACTGAATATCAACGGAACTTC
CGACAGGTCATGCGGAGCGCCGTTGCGCAGGCGCGTGGGCGCCCTGTCAA
TCACAGTGAGATCCGGCATCGTCGCAAGGCCGTCTTAGCACTTTACCGGT
GGACCCGGAAGGGCACTGGGTTGGCTCTTTAGATGGATTCTGCCCAGTCG
GGGGACGCCCAGGCACCCAACGTTCCAGCTGCCACCGAAGAACCAACCGG
CGAAGCCACAACAAAACGTCGCTGGAGAAGGAATCGGATAGCCTGCGACT
CCTGCCATTCGCGTCGCGTGCGGTGCGATCGAGCCTTCCCCTGCTCGCGC
TGTCTTCGCAGTGATATCCGGTGTGAATTCACTCGCGAACGACGAAAGAG
AGGACGCATTGCGCGATCCCGACTGGTAGAGACCAAGACTGCTGTAGAGA
AGGCGAGCCAGCCTGTGGAGACTCGAGATTCAGCACCGGCACCTGCAGAA
GCAGGGTCTGGCCCAGTTCCAAATGGCTCTCCTTCCTCAACATTTCACCA
TAGATCGCCGGCGACAAATGATGTGACGGGGTCGGCCCCAAGTATCGACG
AGCGGCGCTCTCAAGCGGATGTATCACTTCCTCCCAGAAAGCCAGGGCAC
ACTGTTAATGCGACAGAGGAATGGCTAGCAGGCACGCATGTCTCTCCAGG
ATCCTATGAGCCCTTGGCAGGCATCGGCCCCGGAGAAGGCCCTTTCCCTC
GAATCTTTGATATCTGGAATGGGGTCGACTTGGCCGGTTATAGCGACCCA
GCATCTCAAGGCTCCAAGATAACAGGCCTTGGTCAGACACCAGCACCATC
TGCAACGATCCTAAAATATCCGGTCCTCCAGCCAGTAATGCCCTATCTGG
AATCGAGCTTGCCTCGAAAGCTAGTATACGACCTCCTCGACCTGTACTTT
ACAAGCGCGTTTTCCACACATATGCATCCTGTGTGCCATCACATTCATTG
CTATGTCCTACGAAAGGCGTCTTTTCTAAGCCGAGAGGCTCCTCGACCTA
GCAGCCCGGCACTTCTGGCCAGTATGCTTTGGGTGGCAGCGTTAGACGAT
CAGCAAGAAGGCGCCGCCGCGAGTGACCCACTTCATGCTGCGGTCGGTCA
GGATGGCCCTCCTACAACCGTGCACCACCCGTTTGAGGTCGGTGGTGATG
ATCGGGGGTTAGTTGGCCCTGCAGGATCATTGGACGATGTTATCACATAC
ATCCATGTGGCATCCATCATCTCCTCAAGCGAGCAAAAGGCCGCCAGCAT
GCGATGGTGGCATGCCGCCTTTACTCTTGCACGAGAATTGAAGCTGAATC
AGGAGATCGAGGTGATGCCCAGTGAGGAGAATCACCCAGAGGGTTCGAGC
CCGTCATTTGATTATTCACTTGCGGGATGGAGTGGCGTGGACACGGGCCC
CTTTTTTGATTATTCAAACCCTGCCCGGCCAAGCTTGAATTGCGTATGCG
ACCGTGGCCACGAACTGCGTGGCGCTATCACCGAAGAGCATCGTGAAGAG
CGTCGTCGGACATGGTGGCTCCTCTACATTATGGACCGTCACCTCGCTCT
CTGCTACAATCGCCCCCTTGCTCTACTCGATGCTGAAAGCGAGGATCTCT
TATTGCCTCTGGACGAAGGGTCATGGCAGTCAGGTAATATCCACAGCAAT
AGTCCCAAACCGGACGGACCACAGTGCCCACTGTCAGGCGAGAAGAACAA
GCGCCGCGTTTTCCCTAATTTCATTTGCCATGATCATTCTATCTTCGGCT
TCTTTCTCCCTCTGATGACCATTACTGGTGAATTAATCGACCTGAACCAA
GCTCGGAACCATCCAATGCTTGGAGCACGCTTGAACGGAAAGGACCCCTG
GGATGCGCACGTTGGTGAAGTACTACGCCAGCTTGAGCTTTACAAGGCTA
GTCTCACTACGTTTGCAGCCACTGCGTCGGATCCCGATGCGCCCTTGTCC
AGTGCCTTCCCCCCTAAACCCGATCAACAACCAGTTGAACCCTCACTCGC
CCAGGCTTATTCATGGCATACTCAAACGGTCATCTCATATGCATCCTACC
TCGTGCATGTGCTGCATATTCTTCTTGTTGGCAAATGGGATCCTGTGTCG
TTGATCGAGGATAAGGACTTCTGGACTTCATCGCCTGCATTCGCCTCCAC
CATCTCTCACGCTCTTGATGCGGCAGACTCAGTGGACCATATCTTACGCT
ACGACCCCGATATTAGTTTTATGCCGTATTTCTTCGGCATTCAATTGCTC
CAAGGCAGCTTTCTTCTCCTGCTGATTGTGGAGCGGCTGCAGAAAGAAGC
GGGGGAGGGTATTCTAAATGCCTGCGAGGTGATGATCCGAGCGACCGAGT
CCTGCGTGGTGACGTTGAACACTGAATATCAACGGAACTTCCGACAGGTC
ATGCGGAGCGCCGTTGCGCAGGCGCGTGGGCGCCCTGTCAATCACAGTGA
GATCCGGCATCGTCGCAAGGCCGTCTTAGCACTTTACCGGTGGACCCGGA
AGGGCACTGGGTTGGCTCTTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR007219 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:2089184..2091735 + |
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