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CBS51388_003617-T1, CBS51388_003617-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_003617-T1
Unique NameCBS51388_003617-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An04:2111290..2112986-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_003617-T1 ID=CBS51388_003617-T1|Name=CBS51388_003617-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1697bp|location=Sequence derived from alignment at An04:2111290..2112986- (Aspergillus niger CBS 513.88)
ATGGCTCAATCCGCGGACACCCTTCCCATCATTAGACTTACCCCTCTCGA
ATCGACATTAAAATCGCTCTTACTCGATGTTGCGAAATACATACATGAAA
AGAATGTTGCAGAAGGACGCCGCGATGCGGAGCCCACGGTTCTGCGATTT
ACCGGAGGATGGGTGCGGGACAAGCTGTTAGGGGTGGGCAGTAATGATGT
TGACGTCGGTATTAACAATATGACGGGGTATCAGTTTGGTTTGCTCCTCA
AGGAGTATATGGATAGACCAGAAAACTTGGAGAAGTACAGACAAGAGCAG
CCCAATGGAGAGTTGAAGCATGCGATTGCTAGCCTACATAAAATCGAGGC
GAACCCAGAGAAGTCCAAACACCTGGAGACAGTCACAACAAGAATATTCG
GCTTGGATATTGATTTGGTGAATCTACGGAAGGAGACTTACTCGGAAGAT
AGCAGAAATCCACAGATGGAATTTGGAACAGCCCAGGAAGACGCGATGCG
TCGCGATGCGACGATCAATGCGCTTTTCTATAACTTAAACGAATCTATAG
TCGAGGATTTCACTGGACGAGGTCTGGAGGATATGAAGAAGGAGATTATC
CGTACCCCGATGGAACCATATCAAACCTTTCAGGACGATCCACTGCGTGT
GCTACGCTTGATTCGGTTTGCCAGCCGATTGGGTTACAATATTGAAAGGG
AGACCCAGGAGGCAATGCGAAATGAACTTATTGGGGAGGCTCTCAAGCTG
AAGATCAGCAGAGAACGGGTGGGTAAGGAGATAGAGAAGATGCTTCAAGG
TGTGTAGCGTCCAAGTGAGGATTGATTGTTGCTTACAGTTTCTAGGTCCT
GATCCCCGCGGTGCACTGCAATTCATTGATAGTCTTGGGCTGTACCCGAC
TATCTTTGCCAATCATCAGGATGATGCGCAAGCAGATACCTCATCATGGG
CACTTGCATACAATGCGCTGGAGAAAATTCTGAAAGACGAAACCAACGCA
GCTACTGTAAATGTTCGCCAATTCCTCATACGCGACAAACTCGAATCATA
CTACGCATGGGTGATTGCAGCATTTGCTCCGTGGTCAAGTATCCCGTCCC
GCGTTGCGAGGGGACCCAAGGCGAAACCTCTCCCGGCACGGACCGCAGAA
GTAGCCCGAGACAGCCTGCGAGCTGATAACAAAACCATCGCCGTCATCGG
TGATGCGGCACACAACTGGCAGGCCATCACCGATGTCAAGAACTCTGTCC
TCGAGGGACGCATGGATGGCACTGCAGCAGAGGCGCGGCAGCAGGTCGGA
CTGCACATTCGCTCGTGGAAGAAGGATTGGAGGCTCTGTATACTCCTTTC
CATTCTCCAAGAAATTATGCGTGGCGGCGAGTTTACTAGCGGTAAGGATT
TTTCCGTGCCCGTTGTCCTTAAAAGGAACTGATGCTTACATGATGGCAGT
GCTGCAATCGTACGACCGGTTCCTCTCCTACATCAAAGAGCAAGATCTAC
AGGATGCATTTGAGCTGAAGCCCCTCGCCAACGGCGGAGAGATTGTGAAG
GCTCTTGGTTGCAAGACTGGTCCCTGGATGTCGAAAGCTTTGGATATGTC
GATCAAATGGCAGCTGTTGCACCCGGAGGTTACCGACAAGGAAAAGGTGC
TGGAAGAGCTATCCCGTAGAAAAGAAGAGCTAGGCATCGCTACATAG
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Coding sequence (CDS) from alignment at An04:2111290..2112986-

>CBS51388_003617-T1 ID=CBS51388_003617-T1|Name=CBS51388_003617-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4779bp|location=Sequence derived from alignment at An04:2111290..2112986- (Aspergillus niger CBS 513.88)
TGCTGCAATCGTACGACCGGTTCCTCTCCTACATCAAAGAGCAAGATCTA
CAGGATGCATTTGAGCTGAAGCCCCTCGCCAACGGCGGAGAGATTGTGAA
GGCTCTTGGTTGCAAGACTGGTCCCTGGATGTCGAAAGCTTTGGATATGT
CGATCAAATGGCAGCTGTTGCACCCGGAGGTTACCGACAAGGAAAAGGTG
CTGGAAGAGCTATCCCGTAGAAAAGAAGAGCTAGGCATCGCTACATAGGT
CCTGATCCCCGCGGTGCACTGCAATTCATTGATAGTCTTGGGCTGTACCC
GACTATCTTTGCCAATCATCAGGATGATGCGCAAGCAGATACCTCATCAT
GGGCACTTGCATACAATGCGCTGGAGAAAATTCTGAAAGACGAAACCAAC
GCAGCTACTGTAAATGTTCGCCAATTCCTCATACGCGACAAACTCGAATC
ATACTACGCATGGGTGATTGCAGCATTTGCTCCGTGGTCAAGTATCCCGT
CCCGCGTTGCGAGGGGACCCAAGGCGAAACCTCTCCCGGCACGGACCGCA
GAAGTAGCCCGAGACAGCCTGCGAGCTGATAACAAAACCATCGCCGTCAT
CGGTGATGCGGCACACAACTGGCAGGCCATCACCGATGTCAAGAACTCTG
TCCTCGAGGGACGCATGGATGGCACTGCAGCAGAGGCGCGGCAGCAGGTC
GGACTGCACATTCGCTCGTGGAAGAAGGATTGGAGGCTCTGTATACTCCT
TTCCATTCTCCAAGAAATTATGCGTGGCGGCGAGTTTACTAGCGATGGCT
CAATCCGCGGACACCCTTCCCATCATTAGACTTACCCCTCTCGAATCGAC
ATTAAAATCGCTCTTACTCGATGTTGCGAAATACATACATGAAAAGAATG
TTGCAGAAGGACGCCGCGATGCGGAGCCCACGGTTCTGCGATTTACCGGA
GGATGGGTGCGGGACAAGCTGTTAGGGGTGGGCAGTAATGATGTTGACGT
CGGTATTAACAATATGACGGGGTATCAGTTTGGTTTGCTCCTCAAGGAGT
ATATGGATAGACCAGAAAACTTGGAGAAGTACAGACAAGAGCAGCCCAAT
GGAGAGTTGAAGCATGCGATTGCTAGCCTACATAAAATCGAGGCGAACCC
AGAGAAGTCCAAACACCTGGAGACAGTCACAACAAGAATATTCGGCTTGG
ATATTGATTTGGTGAATCTACGGAAGGAGACTTACTCGGAAGATAGCAGA
AATCCACAGATGGAATTTGGAACAGCCCAGGAAGACGCGATGCGTCGCGA
TGCGACGATCAATGCGCTTTTCTATAACTTAAACGAATCTATAGTCGAGG
ATTTCACTGGACGAGGTCTGGAGGATATGAAGAAGGAGATTATCCGTACC
CCGATGGAACCATATCAAACCTTTCAGGACGATCCACTGCGTGTGCTACG
CTTGATTCGGTTTGCCAGCCGATTGGGTTACAATATTGAAAGGGAGACCC
AGGAGGCAATGCGAAATGAACTTATTGGGGAGGCTCTCAAGCTGAAGATC
AGCAGAGAACGGGTGGGTAAGGAGATAGAGAAGATGCTTCAAGTGCTGCA
ATCGTACGACCGGTTCCTCTCCTACATCAAAGAGCAAGATCTACAGGATG
CATTTGAGCTGAAGCCCCTCGCCAACGGCGGAGAGATTGTGAAGGCTCTT
GGTTGCAAGACTGGTCCCTGGATGTCGAAAGCTTTGGATATGTCGATCAA
ATGGCAGCTGTTGCACCCGGAGGTTACCGACAAGGAAAAGGTGCTGGAAG
AGCTATCCCGTAGAAAAGAAGAGCTAGGCATCGCTACATAGGTCCTGATC
CCCGCGGTGCACTGCAATTCATTGATAGTCTTGGGCTGTACCCGACTATC
TTTGCCAATCATCAGGATGATGCGCAAGCAGATACCTCATCATGGGCACT
TGCATACAATGCGCTGGAGAAAATTCTGAAAGACGAAACCAACGCAGCTA
CTGTAAATGTTCGCCAATTCCTCATACGCGACAAACTCGAATCATACTAC
GCATGGGTGATTGCAGCATTTGCTCCGTGGTCAAGTATCCCGTCCCGCGT
TGCGAGGGGACCCAAGGCGAAACCTCTCCCGGCACGGACCGCAGAAGTAG
CCCGAGACAGCCTGCGAGCTGATAACAAAACCATCGCCGTCATCGGTGAT
GCGGCACACAACTGGCAGGCCATCACCGATGTCAAGAACTCTGTCCTCGA
GGGACGCATGGATGGCACTGCAGCAGAGGCGCGGCAGCAGGTCGGACTGC
ACATTCGCTCGTGGAAGAAGGATTGGAGGCTCTGTATACTCCTTTCCATT
CTCCAAGAAATTATGCGTGGCGGCGAGTTTACTAGCGATGGCTCAATCCG
CGGACACCCTTCCCATCATTAGACTTACCCCTCTCGAATCGACATTAAAA
TCGCTCTTACTCGATGTTGCGAAATACATACATGAAAAGAATGTTGCAGA
AGGACGCCGCGATGCGGAGCCCACGGTTCTGCGATTTACCGGAGGATGGG
TGCGGGACAAGCTGTTAGGGGTGGGCAGTAATGATGTTGACGTCGGTATT
AACAATATGACGGGGTATCAGTTTGGTTTGCTCCTCAAGGAGTATATGGA
TAGACCAGAAAACTTGGAGAAGTACAGACAAGAGCAGCCCAATGGAGAGT
TGAAGCATGCGATTGCTAGCCTACATAAAATCGAGGCGAACCCAGAGAAG
TCCAAACACCTGGAGACAGTCACAACAAGAATATTCGGCTTGGATATTGA
TTTGGTGAATCTACGGAAGGAGACTTACTCGGAAGATAGCAGAAATCCAC
AGATGGAATTTGGAACAGCCCAGGAAGACGCGATGCGTCGCGATGCGACG
ATCAATGCGCTTTTCTATAACTTAAACGAATCTATAGTCGAGGATTTCAC
TGGACGAGGTCTGGAGGATATGAAGAAGGAGATTATCCGTACCCCGATGG
AACCATATCAAACCTTTCAGGACGATCCACTGCGTGTGCTACGCTTGATT
CGGTTTGCCAGCCGATTGGGTTACAATATTGAAAGGGAGACCCAGGAGGC
AATGCGAAATGAACTTATTGGGGAGGCTCTCAAGCTGAAGATCAGCAGAG
AACGGGTGGGTAAGGAGATAGAGAAGATGCTTCAAGTGCTGCAATCGTAC
GACCGGTTCCTCTCCTACATCAAAGAGCAAGATCTACAGGATGCATTTGA
GCTGAAGCCCCTCGCCAACGGCGGAGAGATTGTGAAGGCTCTTGGTTGCA
AGACTGGTCCCTGGATGTCGAAAGCTTTGGATATGTCGATCAAATGGCAG
CTGTTGCACCCGGAGGTTACCGACAAGGAAAAGGTGCTGGAAGAGCTATC
CCGTAGAAAAGAAGAGCTAGGCATCGCTACATAGGTCCTGATCCCCGCGG
TGCACTGCAATTCATTGATAGTCTTGGGCTGTACCCGACTATCTTTGCCA
ATCATCAGGATGATGCGCAAGCAGATACCTCATCATGGGCACTTGCATAC
AATGCGCTGGAGAAAATTCTGAAAGACGAAACCAACGCAGCTACTGTAAA
TGTTCGCCAATTCCTCATACGCGACAAACTCGAATCATACTACGCATGGG
TGATTGCAGCATTTGCTCCGTGGTCAAGTATCCCGTCCCGCGTTGCGAGG
GGACCCAAGGCGAAACCTCTCCCGGCACGGACCGCAGAAGTAGCCCGAGA
CAGCCTGCGAGCTGATAACAAAACCATCGCCGTCATCGGTGATGCGGCAC
ACAACTGGCAGGCCATCACCGATGTCAAGAACTCTGTCCTCGAGGGACGC
ATGGATGGCACTGCAGCAGAGGCGCGGCAGCAGGTCGGACTGCACATTCG
CTCGTGGAAGAAGGATTGGAGGCTCTGTATACTCCTTTCCATTCTCCAAG
AAATTATGCGTGGCGGCGAGTTTACTAGCGATGGCTCAATCCGCGGACAC
CCTTCCCATCATTAGACTTACCCCTCTCGAATCGACATTAAAATCGCTCT
TACTCGATGTTGCGAAATACATACATGAAAAGAATGTTGCAGAAGGACGC
CGCGATGCGGAGCCCACGGTTCTGCGATTTACCGGAGGATGGGTGCGGGA
CAAGCTGTTAGGGGTGGGCAGTAATGATGTTGACGTCGGTATTAACAATA
TGACGGGGTATCAGTTTGGTTTGCTCCTCAAGGAGTATATGGATAGACCA
GAAAACTTGGAGAAGTACAGACAAGAGCAGCCCAATGGAGAGTTGAAGCA
TGCGATTGCTAGCCTACATAAAATCGAGGCGAACCCAGAGAAGTCCAAAC
ACCTGGAGACAGTCACAACAAGAATATTCGGCTTGGATATTGATTTGGTG
AATCTACGGAAGGAGACTTACTCGGAAGATAGCAGAAATCCACAGATGGA
ATTTGGAACAGCCCAGGAAGACGCGATGCGTCGCGATGCGACGATCAATG
CGCTTTTCTATAACTTAAACGAATCTATAGTCGAGGATTTCACTGGACGA
GGTCTGGAGGATATGAAGAAGGAGATTATCCGTACCCCGATGGAACCATA
TCAAACCTTTCAGGACGATCCACTGCGTGTGCTACGCTTGATTCGGTTTG
CCAGCCGATTGGGTTACAATATTGAAAGGGAGACCCAGGAGGCAATGCGA
AATGAACTTATTGGGGAGGCTCTCAAGCTGAAGATCAGCAGAGAACGGGT
GGGTAAGGAGATAGAGAAGATGCTTCAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0016779nucleotidyltransferase activity
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_003617CBS51388_003617Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003617-T1CBS51388_003617-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003617-T1.cdsCBS51388_003617-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003617-T1.exon3CBS51388_003617-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_003617-T1.exon2CBS51388_003617-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_003617-T1.exon1CBS51388_003617-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR002646
DBxrefInterPro:IPR043519
DBxrefInterPro:IPR032828
DBxrefPFAM:PF12627
DBxrefPFAM:PF01743
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An04supercontigAn04:2111290..2112986 -
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