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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:2117321..2118992+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003619-T1 ID=CBS51388_003619-T1|Name=CBS51388_003619-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1672bp|location=Sequence derived from alignment at An04:2117321..2118992+ (Aspergillus niger CBS 513.88)
ATGACGACCCTCCTTCAATATATCCTCTCGCAGGACTCCTTCAGAAAGTC
CGTCCAGCCTCAGTTCTGTCCCCACTCTTGAATTGTTCTTACTAACATAC
CTTCACACAATAGAAACCGCCTCCCCTCCCTCTACTCCGACTTCCCCATC
CACCGCAAGACCAACCCCGAGGGATACACCACCAACATCACAGCCTGGGC
ACATGCCCTAACCTCCGCCGCAAAGCACGGCTACATCGCTCCACATGGGC
CTGCCTCGAAGGGCAAAGCGAACCACTTGATTCTCAGAGCTGATGAATCC
TTGCTACGTGATCTGGAGATCCCGGAGTGTGGACGACCTGTTGCGCTGGG
AGCAGTTTTCGTACGTCACAATGAAAAGGATACATGAGAAAATGCGGCGT
TCATATTGACTAATTGTGGCTCTGATGTGATACAGGATGAAGCGACAAGG
AATCGAACCATGGTGCCGCTGCACCTTTATCGAACTAACCCGGCGAGCTT
GCGTAAGCCGCAGTGGGGGATTGATACATCTGTGTTGAGCCCATGGGCTG
TGATGAGCTGGGGGATGAAGCAGTTGAAAGGGGCTGTGATTGGATCTGAG
GAGGCGACGCCGAGATTACAGCCTCAGGAGTTGGTTTTGGTAGAGAATCT
GAAGGTAGGTAGATTGGTTTGGATTTCCATTGATGGTTGGTGTGGGTAAG
GCTAATGAGGTATGTTTATAGGAGGCTGCAGACCGCGTAGTTAAGCACGC
TACGGGGAATAGTCCGTCGAAGACTGACTTGGTCTACTCGAAGGAGAGCT
TCGTGAGTGAATTCGCTGGTGTTCTGGATGAAAGGAGTCTCCTGTCGGAC
GCGGATATGGATGTGCTTTTACTGTATATGTCGCGTGATAGCGGTGCTAT
TGCGTATGATGGGAAGGCATGTATTATCTCATTCATATATTTGCGCTTTT
TATCTATCCCATGCAAGGCGCTAACTATGCTGCAGACTATCAAATTCAGA
ACCAGTGACGCTCCAAAAGATATCACAGAGCAAGATACCGCCGTCGCCTC
TATCAAAACGCTCATGGCGACTATGACCAAGCAGGTGGAGAATCTGGAGA
ACAAAATCACTGAACTGAATTCAACTGCCAAAATGGCGCTGCAAAACAAG
AACCGCGTTTCGGCGCTCTCGGCTGTGCGCTCTAAGAAGCTTGCGGAGCA
TAATCTGAAACAGAGACTGGATACTCTGATGCAGCTTGAGGAGGTATATT
CCAAAATCGAGCAGGCTACGGATCAAGTGCAATTCGTGAAGGTCATGGAG
GCAAGCACAGGAGCCCTTCGAGGCTTGCATACTCAGATCGGCGGTGCGGA
GAGGGTCGAAGATGTGGTGCAAGAGCTGCGTGATGAGATGTCCAAGGTGG
ACGAGGTCGGAAACATCATGAACGAGGCTGGTCCACAGATTGATGAGACT
GAGATCGACGACGAGCTGCAGGAATTGGAGAACAAGGAGCGGGAGGAAAT
GGAAGAGAAGGAGGCAGAAGAGACTCGCAAGAAGCTTGCCGAACTTGACA
GTCTCCAGCAGGGCGCTCAGGAAGCCGCTCGCAGAGCAGCAGCAGAGCGA
GCCGTGGAATCGGAATTGGAGGACCGCCTGTCTCGGATGTCGGTCGAGGA
GGGTCCCAATACCACTGCTTAG back to topCoding sequence (CDS) from alignment at An04:2117321..2118992+ >CBS51388_003619-T1 ID=CBS51388_003619-T1|Name=CBS51388_003619-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6810bp|location=Sequence derived from alignment at An04:2117321..2118992+ (Aspergillus niger CBS 513.88)
ATGACGACCCTCCTTCAATATATCCTCTCGCAGGACTCCTTCAGAAAAAA
CCGCCTCCCCTCCCTCTACTCCGACTTCCCCATCCACCGCAAGACCAACC
CCGAGGGATACACCACCAACATCACAGCCTGGGCACATGCCCTAACCTCC
GCCGCAAAGCACGGCTACATCGCTCCACATGGGCCTGCCTCGAAGGGCAA
AGCGAACCACTTGATTCTCAGAGCTGATGAATCCTTGCTACGTGATCTGG
AGATCCCGGAGTGTGGACGACCTGTTGCGCTGGGAGCAGTTTTCGATGAA
GCGACAAGGAATCGAACCATGGTGCCGCTGCACCTTTATCGAACTAACCC
GGCGAGCTTGCGTAAGCCGCAGTGGGGGATTGATACATCTGTGTTGAGCC
CATGGGCTGTGATGAGCTGGGGGATGAAGCAGTTGAAAGGGGCTGTGATT
GGATCTGAGGAGGCGACGCCGAGATTACAGCCTCAGGAGTTGGTTTTGGT
AGAGAATCTGAAGGAGGCTGCAGACCGCGTAGTTAAGCACGCTACGGGGA
ATAGTCCGTCGAAGACTGACTTGGTCTACTCGAAGGAGAGCTTCGTGAGT
GAATTCGCTGGTGTTCTGGATGAAAGGAGTCTCCTGTCGGACGCGGATAT
GGATGTGCTTTTACTGTATATGTCGCGTGATAGCGGTGCTATTGCTGACG
CTCCAAAAGATATCACAGAGCAAGATACCGCCGTCGCCTCTATCAAAACG
CTCATGGCGACTATGACCAAGCAGGTGGAGAATCTGGAGAACAAAATCAC
TGAACTGAATTCAACTGCCAAAATGGCGCTGCAAAACAAGAACCGCGTTT
CGGCGCTCTCGGCTGTGCGCTCTAAGAAGCTTGCGGAGCATAATCTGAAA
CAGAGACTGGATACTCTGATGCAGCTTGAGGAGGTATATTCCAAAATCGA
GCAGGCTACGGATCAAGTGCAATTCGTGAAGGTCATGGAGGCAAGCACAG
GAGCCCTTCGAGGCTTGCATACTCAGATCGGCGGTGCGGAGAGGGTCGAA
GATGTGGTGCAAGAGCTGCGTGATGAGATGTCCAAGGTGGACGAGGTCGG
AAACATCATGAACGAGGCTGGTCCACAGATTGATGAGACTGAGATCGACG
ACGAGCTGCAGGAATTGGAGAACAAGGAGCGGGAGGAAATGGAAGAGAAG
GAGGCAGAAGAGACTCGCAAGAAGCTTGCCGAACTTGACAGTCTCCAGCA
GGGCGCTCAGGAAGCCGCTCGCAGAGCAGCAGCAGAGCGAGCCGTGGAAT
CGGAATTGGAGGACCGCCTGTCTCGGATGTCGGTCGAGGAGGGTCCCAAT
ACCACTGCTTAGATGACGACCCTCCTTCAATATATCCTCTCGCAGGACTC
CTTCAGAAAAAACCGCCTCCCCTCCCTCTACTCCGACTTCCCCATCCACC
GCAAGACCAACCCCGAGGGATACACCACCAACATCACAGCCTGGGCACAT
GCCCTAACCTCCGCCGCAAAGCACGGCTACATCGCTCCACATGGGCCTGC
CTCGAAGGGCAAAGCGAACCACTTGATTCTCAGAGCTGATGAATCCTTGC
TACGTGATCTGGAGATCCCGGAGTGTGGACGACCTGTTGCGCTGGGAGCA
GTTTTCGATGAAGCGACAAGGAATCGAACCATGGTGCCGCTGCACCTTTA
TCGAACTAACCCGGCGAGCTTGCGTAAGCCGCAGTGGGGGATTGATACAT
CTGTGTTGAGCCCATGGGCTGTGATGAGCTGGGGGATGAAGCAGTTGAAA
GGGGCTGTGATTGGATCTGAGGAGGCGACGCCGAGATTACAGCCTCAGGA
GTTGGTTTTGGTAGAGAATCTGAAGGAGGCTGCAGACCGCGTAGTTAAGC
ACGCTACGGGGAATAGTCCGTCGAAGACTGACTTGGTCTACTCGAAGGAG
AGCTTCGTGAGTGAATTCGCTGGTGTTCTGGATGAAAGGAGTCTCCTGTC
GGACGCGGATATGGATGTGCTTTTACTGTATATGTCGCGTGATAGCGGTG
CTATTGCTGACGCTCCAAAAGATATCACAGAGCAAGATACCGCCGTCGCC
TCTATCAAAACGCTCATGGCGACTATGACCAAGCAGGTGGAGAATCTGGA
GAACAAAATCACTGAACTGAATTCAACTGCCAAAATGGCGCTGCAAAACA
AGAACCGCGTTTCGGCGCTCTCGGCTGTGCGCTCTAAGAAGCTTGCGGAG
CATAATCTGAAACAGAGACTGGATACTCTGATGCAGCTTGAGGAGGTATA
TTCCAAAATCGAGCAGGCTACGGATCAAGTGCAATTCGTGAAGGTCATGG
AGGCAAGCACAGGAGCCCTTCGAGGCTTGCATACTCAGATCGGCGGTGCG
GAGAGGGTCGAAGATGTGGTGCAAGAGCTGCGTGATGAGATGTCCAAGGT
GGACGAGGTCGGAAACATCATGAACGAGGCTGGTCCACAGATTGATGAGA
CTGAGATCGACGACGAGCTGCAGGAATTGGAGAACAAGGAGCGGGAGGAA
ATGGAAGAGAAGGAGGCAGAAGAGACTCGCAAGAAGCTTGCCGAACTTGA
CAGTCTCCAGCAGGGCGCTCAGGAAGCCGCTCGCAGAGCAGCAGCAGAGC
GAGCCGTGGAATCGGAATTGGAGGACCGCCTGTCTCGGATGTCGGTCGAG
GAGGGTCCCAATACCACTGCTTAGATGACGACCCTCCTTCAATATATCCT
CTCGCAGGACTCCTTCAGAAAAAACCGCCTCCCCTCCCTCTACTCCGACT
TCCCCATCCACCGCAAGACCAACCCCGAGGGATACACCACCAACATCACA
GCCTGGGCACATGCCCTAACCTCCGCCGCAAAGCACGGCTACATCGCTCC
ACATGGGCCTGCCTCGAAGGGCAAAGCGAACCACTTGATTCTCAGAGCTG
ATGAATCCTTGCTACGTGATCTGGAGATCCCGGAGTGTGGACGACCTGTT
GCGCTGGGAGCAGTTTTCGATGAAGCGACAAGGAATCGAACCATGGTGCC
GCTGCACCTTTATCGAACTAACCCGGCGAGCTTGCGTAAGCCGCAGTGGG
GGATTGATACATCTGTGTTGAGCCCATGGGCTGTGATGAGCTGGGGGATG
AAGCAGTTGAAAGGGGCTGTGATTGGATCTGAGGAGGCGACGCCGAGATT
ACAGCCTCAGGAGTTGGTTTTGGTAGAGAATCTGAAGGAGGCTGCAGACC
GCGTAGTTAAGCACGCTACGGGGAATAGTCCGTCGAAGACTGACTTGGTC
TACTCGAAGGAGAGCTTCGTGAGTGAATTCGCTGGTGTTCTGGATGAAAG
GAGTCTCCTGTCGGACGCGGATATGGATGTGCTTTTACTGTATATGTCGC
GTGATAGCGGTGCTATTGCTGACGCTCCAAAAGATATCACAGAGCAAGAT
ACCGCCGTCGCCTCTATCAAAACGCTCATGGCGACTATGACCAAGCAGGT
GGAGAATCTGGAGAACAAAATCACTGAACTGAATTCAACTGCCAAAATGG
CGCTGCAAAACAAGAACCGCGTTTCGGCGCTCTCGGCTGTGCGCTCTAAG
AAGCTTGCGGAGCATAATCTGAAACAGAGACTGGATACTCTGATGCAGCT
TGAGGAGGTATATTCCAAAATCGAGCAGGCTACGGATCAAGTGCAATTCG
TGAAGGTCATGGAGGCAAGCACAGGAGCCCTTCGAGGCTTGCATACTCAG
ATCGGCGGTGCGGAGAGGGTCGAAGATGTGGTGCAAGAGCTGCGTGATGA
GATGTCCAAGGTGGACGAGGTCGGAAACATCATGAACGAGGCTGGTCCAC
AGATTGATGAGACTGAGATCGACGACGAGCTGCAGGAATTGGAGAACAAG
GAGCGGGAGGAAATGGAAGAGAAGGAGGCAGAAGAGACTCGCAAGAAGCT
TGCCGAACTTGACAGTCTCCAGCAGGGCGCTCAGGAAGCCGCTCGCAGAG
CAGCAGCAGAGCGAGCCGTGGAATCGGAATTGGAGGACCGCCTGTCTCGG
ATGTCGGTCGAGGAGGGTCCCAATACCACTGCTTAGATGACGACCCTCCT
TCAATATATCCTCTCGCAGGACTCCTTCAGAAAAAACCGCCTCCCCTCCC
TCTACTCCGACTTCCCCATCCACCGCAAGACCAACCCCGAGGGATACACC
ACCAACATCACAGCCTGGGCACATGCCCTAACCTCCGCCGCAAAGCACGG
CTACATCGCTCCACATGGGCCTGCCTCGAAGGGCAAAGCGAACCACTTGA
TTCTCAGAGCTGATGAATCCTTGCTACGTGATCTGGAGATCCCGGAGTGT
GGACGACCTGTTGCGCTGGGAGCAGTTTTCGATGAAGCGACAAGGAATCG
AACCATGGTGCCGCTGCACCTTTATCGAACTAACCCGGCGAGCTTGCGTA
AGCCGCAGTGGGGGATTGATACATCTGTGTTGAGCCCATGGGCTGTGATG
AGCTGGGGGATGAAGCAGTTGAAAGGGGCTGTGATTGGATCTGAGGAGGC
GACGCCGAGATTACAGCCTCAGGAGTTGGTTTTGGTAGAGAATCTGAAGG
AGGCTGCAGACCGCGTAGTTAAGCACGCTACGGGGAATAGTCCGTCGAAG
ACTGACTTGGTCTACTCGAAGGAGAGCTTCGTGAGTGAATTCGCTGGTGT
TCTGGATGAAAGGAGTCTCCTGTCGGACGCGGATATGGATGTGCTTTTAC
TGTATATGTCGCGTGATAGCGGTGCTATTGCTGACGCTCCAAAAGATATC
ACAGAGCAAGATACCGCCGTCGCCTCTATCAAAACGCTCATGGCGACTAT
GACCAAGCAGGTGGAGAATCTGGAGAACAAAATCACTGAACTGAATTCAA
CTGCCAAAATGGCGCTGCAAAACAAGAACCGCGTTTCGGCGCTCTCGGCT
GTGCGCTCTAAGAAGCTTGCGGAGCATAATCTGAAACAGAGACTGGATAC
TCTGATGCAGCTTGAGGAGGTATATTCCAAAATCGAGCAGGCTACGGATC
AAGTGCAATTCGTGAAGGTCATGGAGGCAAGCACAGGAGCCCTTCGAGGC
TTGCATACTCAGATCGGCGGTGCGGAGAGGGTCGAAGATGTGGTGCAAGA
GCTGCGTGATGAGATGTCCAAGGTGGACGAGGTCGGAAACATCATGAACG
AGGCTGGTCCACAGATTGATGAGACTGAGATCGACGACGAGCTGCAGGAA
TTGGAGAACAAGGAGCGGGAGGAAATGGAAGAGAAGGAGGCAGAAGAGAC
TCGCAAGAAGCTTGCCGAACTTGACAGTCTCCAGCAGGGCGCTCAGGAAG
CCGCTCGCAGAGCAGCAGCAGAGCGAGCCGTGGAATCGGAATTGGAGGAC
CGCCTGTCTCGGATGTCGGTCGAGGAGGGTCCCAATACCACTGCTTAGAT
GACGACCCTCCTTCAATATATCCTCTCGCAGGACTCCTTCAGAAAAAACC
GCCTCCCCTCCCTCTACTCCGACTTCCCCATCCACCGCAAGACCAACCCC
GAGGGATACACCACCAACATCACAGCCTGGGCACATGCCCTAACCTCCGC
CGCAAAGCACGGCTACATCGCTCCACATGGGCCTGCCTCGAAGGGCAAAG
CGAACCACTTGATTCTCAGAGCTGATGAATCCTTGCTACGTGATCTGGAG
ATCCCGGAGTGTGGACGACCTGTTGCGCTGGGAGCAGTTTTCGATGAAGC
GACAAGGAATCGAACCATGGTGCCGCTGCACCTTTATCGAACTAACCCGG
CGAGCTTGCGTAAGCCGCAGTGGGGGATTGATACATCTGTGTTGAGCCCA
TGGGCTGTGATGAGCTGGGGGATGAAGCAGTTGAAAGGGGCTGTGATTGG
ATCTGAGGAGGCGACGCCGAGATTACAGCCTCAGGAGTTGGTTTTGGTAG
AGAATCTGAAGGAGGCTGCAGACCGCGTAGTTAAGCACGCTACGGGGAAT
AGTCCGTCGAAGACTGACTTGGTCTACTCGAAGGAGAGCTTCGTGAGTGA
ATTCGCTGGTGTTCTGGATGAAAGGAGTCTCCTGTCGGACGCGGATATGG
ATGTGCTTTTACTGTATATGTCGCGTGATAGCGGTGCTATTGCTGACGCT
CCAAAAGATATCACAGAGCAAGATACCGCCGTCGCCTCTATCAAAACGCT
CATGGCGACTATGACCAAGCAGGTGGAGAATCTGGAGAACAAAATCACTG
AACTGAATTCAACTGCCAAAATGGCGCTGCAAAACAAGAACCGCGTTTCG
GCGCTCTCGGCTGTGCGCTCTAAGAAGCTTGCGGAGCATAATCTGAAACA
GAGACTGGATACTCTGATGCAGCTTGAGGAGGTATATTCCAAAATCGAGC
AGGCTACGGATCAAGTGCAATTCGTGAAGGTCATGGAGGCAAGCACAGGA
GCCCTTCGAGGCTTGCATACTCAGATCGGCGGTGCGGAGAGGGTCGAAGA
TGTGGTGCAAGAGCTGCGTGATGAGATGTCCAAGGTGGACGAGGTCGGAA
ACATCATGAACGAGGCTGGTCCACAGATTGATGAGACTGAGATCGACGAC
GAGCTGCAGGAATTGGAGAACAAGGAGCGGGAGGAAATGGAAGAGAAGGA
GGCAGAAGAGACTCGCAAGAAGCTTGCCGAACTTGACAGTCTCCAGCAGG
GCGCTCAGGAAGCCGCTCGCAGAGCAGCAGCAGAGCGAGCCGTGGAATCG
GAATTGGAGGACCGCCTGTCTCGGATGTCGGTCGAGGAGGGTCCCAATAC
CACTGCTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007034 | vacuolar transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR005024 |
| DBxref | PFAM:PF03357 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:2117321..2118992 + |
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