|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:2129931..2131605+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003625-T1 ID=CBS51388_003625-T1|Name=CBS51388_003625-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1675bp|location=Sequence derived from alignment at An04:2129931..2131605+ (Aspergillus niger CBS 513.88)
ATGTCGATGGACCTGGATGCGCCGGTGCCTTTCGAGGCCATCCCGCAAGA
TCAGATCGCTGCGACGTGAGTTACCCCGCAAATTAAAAGAAAATTTCTCT
ATAAACATACACGAGGGGCAGTATGATCGAGGACTTCAACTAACAAATGT
GCTTAATAGTATCCTTTGTTGCAACTGTGGCGCGCCCATCGATGGAACAA
CATCCGCAGGCGCCCTTTGCCAGGACTGTGTGAAATTGACGGTTGATATC
TCCCAGGGCATCCAGAGAGAGGCAGTTCTCCACTGCTGCAAGGACTGCGA
GCGGTGGCTTCAACCTCCCACCAGCTGGGTTAGTGCTGCGCTCGAATCGA
AGGAACTCCTCGCACACTGCTTGCGCAAGCTCCGCGGCTTGTCCAAGGTT
CGCATTATCGATGCCAGCTTCATCTGGACCGAACCCCACTCGAAGCGTAT
TAAGGTCAAGATCACCATCCAGCAGGAGGCATTCCAGGGCACCATTGTGC
AGCAGACTTTCGAGGTTGAATACGTTGTCGCCTCGCTACAATGCCCTGAC
TGCAAGAAGTCGTTCACTGTCAACACTTGGAACTCCAGCATTCAGCTGCG
CCAGAAGGTGCCTCACAAGCGAACCTTCTTGTACCTTGAGCAAATCATCC
TCAAGCACAACGCTCACCGCGATACAATCAACATCAAGGAGGCCAAGGAC
GGTTTGGATTTCTACTTTGCGCAGAGGAATCATGCGGAGAAGATGGTCGA
GTTCCTCTCCTCCGTCGTCCCCACCAAGGTCAAGAAGTCGCAGGAGCTTA
TCTCCATGGATATTCACACCTCCACGAAGTCATACAAGTTCACCTTCTCG
ATTGAATTGATCCCTATCTGCAAGGATGATTTGGTTGCGCTGCCCATCAA
ACTTGCCAGATCACTGGGCAACATCTCGCCCCTGGCCCTCTGCTACCGCG
TCGGTACCTCTGTCAACCTTCTCGACCCCAACACGCTCCAGACCGCCGAT
GTCCCGACAAACACCTACTGGAGATCACCCTTCAGGAGTCTTGCCGATGT
GACGGAGCTGACCGAGTTCATCATCATGGATATTGAGCTGGTTGGACGGT
CGAACGGACGGTTCTATCTGGCCGAGGCAACTGTTGCCCGTGCCTCGGAT
CTTGGCTCGAACGATCAAACCTATTTCACCCGCACCCACCTGGGTGGAGT
ACTCCACGTCGGTGACTCTGTTCTCGGTTATCACCTGACTGGTACCAATT
TTAACGACCCCAACTTCGAGGCGATCGAGGCTAGTGGCCAGTACAGCTCC
GCGATTCCCGACGTTGTGCTCGTGAAGAAGTTCTATGCCCGCAAGAAGAA
GAACAAGAACCGCAACTGGCGTCTTAAGCGCATGGCTCTTGAGTACGAGG
AGGAGGCGGCCCAGCAAGCTGCTGGCAACCTCAACCGTAAGCAGGAAGCC
GAGCGCAACCGCCTTGAAGAGGACTTTGAGATGTTCTTGCGCGATGTTGA
AGAGGATCAGGAATTGCGTGGCACTCTTGATCTGTACAAGGCACGGAACC
GTGCCCCCGTGGAGCACGGTGGTATGGATATGGATGAGGATAGCGAAGAT
GATGAGGTGCCCAAGATCAACATGGATGAGCTGCTTGATGACTTTGACGA
GTTGAACATGGACGATGACCATTAA back to topCoding sequence (CDS) from alignment at An04:2129931..2131605+ >CBS51388_003625-T1 ID=CBS51388_003625-T1|Name=CBS51388_003625-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3162bp|location=Sequence derived from alignment at An04:2129931..2131605+ (Aspergillus niger CBS 513.88)
ATGTCGATGGACCTGGATGCGCCGGTGCCTTTCGAGGCCATCCCGCAAGA
TCAGATCGCTGCGACTATCCTTTGTTGCAACTGTGGCGCGCCCATCGATG
GAACAACATCCGCAGGCGCCCTTTGCCAGGACTGTGTGAAATTGACGGTT
GATATCTCCCAGGGCATCCAGAGAGAGGCAGTTCTCCACTGCTGCAAGGA
CTGCGAGCGGTGGCTTCAACCTCCCACCAGCTGGGTTAGTGCTGCGCTCG
AATCGAAGGAACTCCTCGCACACTGCTTGCGCAAGCTCCGCGGCTTGTCC
AAGGTTCGCATTATCGATGCCAGCTTCATCTGGACCGAACCCCACTCGAA
GCGTATTAAGGTCAAGATCACCATCCAGCAGGAGGCATTCCAGGGCACCA
TTGTGCAGCAGACTTTCGAGGTTGAATACGTTGTCGCCTCGCTACAATGC
CCTGACTGCAAGAAGTCGTTCACTGTCAACACTTGGAACTCCAGCATTCA
GCTGCGCCAGAAGGTGCCTCACAAGCGAACCTTCTTGTACCTTGAGCAAA
TCATCCTCAAGCACAACGCTCACCGCGATACAATCAACATCAAGGAGGCC
AAGGACGGTTTGGATTTCTACTTTGCGCAGAGGAATCATGCGGAGAAGAT
GGTCGAGTTCCTCTCCTCCGTCGTCCCCACCAAGGTCAAGAAGTCGCAGG
AGCTTATCTCCATGGATATTCACACCTCCACGAAGTCATACAAGTTCACC
TTCTCGATTGAATTGATCCCTATCTGCAAGGATGATTTGGTTGCGCTGCC
CATCAAACTTGCCAGATCACTGGGCAACATCTCGCCCCTGGCCCTCTGCT
ACCGCGTCGGTACCTCTGTCAACCTTCTCGACCCCAACACGCTCCAGACC
GCCGATGTCCCGACAAACACCTACTGGAGATCACCCTTCAGGAGTCTTGC
CGATGTGACGGAGCTGACCGAGTTCATCATCATGGATATTGAGCTGGTTG
GACGGTCGAACGGACGGTTCTATCTGGCCGAGGCAACTGTTGCCCGTGCC
TCGGATCTTGGCTCGAACGATCAAACCTATTTCACCCGCACCCACCTGGG
TGGAGTACTCCACGTCGGTGACTCTGTTCTCGGTTATCACCTGACTGGTA
CCAATTTTAACGACCCCAACTTCGAGGCGATCGAGGCTAGTGGCCAGTAC
AGCTCCGCGATTCCCGACGTTGTGCTCGTGAAGAAGTTCTATGCCCGCAA
GAAGAAGAACAAGAACCGCAACTGGCGTCTTAAGCGCATGGCTCTTGAGT
ACGAGGAGGAGGCGGCCCAGCAAGCTGCTGGCAACCTCAACCGTAAGCAG
GAAGCCGAGCGCAACCGCCTTGAAGAGGACTTTGAGATGTTCTTGCGCGA
TGTTGAAGAGGATCAGGAATTGCGTGGCACTCTTGATCTGTACAAGGCAC
GGAACCGTGCCCCCGTGGAGCACGGTGGTATGGATATGGATGAGGATAGC
GAAGATGATGAGGTGCCCAAGATCAACATGGATGAGCTGCTTGATGACTT
TGACGAGTTGAACATGGACGATGACCATTAAATGTCGATGGACCTGGATG
CGCCGGTGCCTTTCGAGGCCATCCCGCAAGATCAGATCGCTGCGACTATC
CTTTGTTGCAACTGTGGCGCGCCCATCGATGGAACAACATCCGCAGGCGC
CCTTTGCCAGGACTGTGTGAAATTGACGGTTGATATCTCCCAGGGCATCC
AGAGAGAGGCAGTTCTCCACTGCTGCAAGGACTGCGAGCGGTGGCTTCAA
CCTCCCACCAGCTGGGTTAGTGCTGCGCTCGAATCGAAGGAACTCCTCGC
ACACTGCTTGCGCAAGCTCCGCGGCTTGTCCAAGGTTCGCATTATCGATG
CCAGCTTCATCTGGACCGAACCCCACTCGAAGCGTATTAAGGTCAAGATC
ACCATCCAGCAGGAGGCATTCCAGGGCACCATTGTGCAGCAGACTTTCGA
GGTTGAATACGTTGTCGCCTCGCTACAATGCCCTGACTGCAAGAAGTCGT
TCACTGTCAACACTTGGAACTCCAGCATTCAGCTGCGCCAGAAGGTGCCT
CACAAGCGAACCTTCTTGTACCTTGAGCAAATCATCCTCAAGCACAACGC
TCACCGCGATACAATCAACATCAAGGAGGCCAAGGACGGTTTGGATTTCT
ACTTTGCGCAGAGGAATCATGCGGAGAAGATGGTCGAGTTCCTCTCCTCC
GTCGTCCCCACCAAGGTCAAGAAGTCGCAGGAGCTTATCTCCATGGATAT
TCACACCTCCACGAAGTCATACAAGTTCACCTTCTCGATTGAATTGATCC
CTATCTGCAAGGATGATTTGGTTGCGCTGCCCATCAAACTTGCCAGATCA
CTGGGCAACATCTCGCCCCTGGCCCTCTGCTACCGCGTCGGTACCTCTGT
CAACCTTCTCGACCCCAACACGCTCCAGACCGCCGATGTCCCGACAAACA
CCTACTGGAGATCACCCTTCAGGAGTCTTGCCGATGTGACGGAGCTGACC
GAGTTCATCATCATGGATATTGAGCTGGTTGGACGGTCGAACGGACGGTT
CTATCTGGCCGAGGCAACTGTTGCCCGTGCCTCGGATCTTGGCTCGAACG
ATCAAACCTATTTCACCCGCACCCACCTGGGTGGAGTACTCCACGTCGGT
GACTCTGTTCTCGGTTATCACCTGACTGGTACCAATTTTAACGACCCCAA
CTTCGAGGCGATCGAGGCTAGTGGCCAGTACAGCTCCGCGATTCCCGACG
TTGTGCTCGTGAAGAAGTTCTATGCCCGCAAGAAGAAGAACAAGAACCGC
AACTGGCGTCTTAAGCGCATGGCTCTTGAGTACGAGGAGGAGGCGGCCCA
GCAAGCTGCTGGCAACCTCAACCGTAAGCAGGAAGCCGAGCGCAACCGCC
TTGAAGAGGACTTTGAGATGTTCTTGCGCGATGTTGAAGAGGATCAGGAA
TTGCGTGGCACTCTTGATCTGTACAAGGCACGGAACCGTGCCCCCGTGGA
GCACGGTGGTATGGATATGGATGAGGATAGCGAAGATGATGAGGTGCCCA
AGATCAACATGGATGAGCTGCTTGATGACTTTGACGAGTTGAACATGGAC
GATGACCATTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262CA4 |
| DBxref | InterPro:IPR007064 |
| DBxref | PFAM:PF04981 |
| Product | ribosome-binding protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:2129931..2131605 + |
|
