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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:2188631..2189844- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003645-T1 ID=CBS51388_003645-T1|Name=CBS51388_003645-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1214bp|location=Sequence derived from alignment at An04:2188631..2189844- (Aspergillus niger CBS 513.88)
ATGTCCGCAAAGACTGTACAAGGCCGCAATGGCAAGAAGCCAGCCTCCCC
AGCTGTGAACCTCATCGGTAAGCAATATTCTCTCGGCGCATTGATTGAGT
ACGGTACTAACTTGCGACTCAGCTGGTGGTGGTGCTGGTATGATGGAAGC
GCTCGTGTGTCACCCTCTAGGTATGTATAATTATGGGTCAATTGGCTGTC
TTGAGTGAGGATCGCGCTGACAATCTATGCCAGACACCATCAAAGTTCGG
ATGCAGCTCTCCCGCCGTGCCCGGGCACCGGGTGTAAGTGAGAACCATAT
GCAAAGCATTGAGTCCTAGCTAACAGTTCGCTAGGTAAAACCCCGCGGGT
TCGTAGCCACCGGTGTTGAGATCGTGAAGAAGGAGACTGCCATGGGTCTG
TACAAGGGACTGGGTGCCGTCCTTGGTGGTATCATCCCGAAGATGGCCAT
CCGGTTCACCTCCTACGAATCTTACAAGCAAATGCTTGCCGATAAGGAGA
CTGGTGCTGTGACCAGCAAAGCTACCTTCTTGGGTAAGTCACGTATTCTT
GAATCGCGTCCAGTCATGGATAGGGAGGCTAACGAGGCTCTTTTATTTAG
CTGGTCTTGCTGCTGGTGTGACCGAAGCCGTGGCAGTGGTCAATCCCATG
GAGGTTGTTAAGATTCGTTTGCAAGCACAACATCACAGTTTGGCGGACCC
TCTCGATACCCCCAAGTACCGCAGTGCACCACATGCGCTTTTCACCGTGA
TTAAGGAAGAGGGTTTCAGCACCCTGTACCGCGGTGTCTCTCTGACTGCC
CTTCGGCAAGGAACCAACCAAGCAGCCAACTTCACAGCCTACACCGAATT
GAAGGCTTTCCTCCAGAGGGTTCAGCCGGAGTACAGCAACACACAGCTGC
CTTCCTACCAGACAACTTTCATCGGTCTGATTTCTGGTGCTGTCGGACCT
TTCTCCAATGCCCCGATCGACACGATCAAGACGAGATTGCAGAAGACCCG
TGCTGAGCCCGGTCAATCAGCGGTGTCTCGTATCATGGTCATCGCGAAGG
ACATGTTCAAGCAAGAGGGTGCTCGTGCCTTCTACAAGGGTATCACGCCC
CGTGTGATGAGAGTCGCGCCTGGTCAGGCCGTCACTTTCACCGTGTATGA
GTTCCTGAAGGGCAAGCTGGAGAACTCCGGATGGGCCTTCGTCGGTGGAA
ACTATGAAGAGTAA back to topCoding sequence (CDS) from alignment at An04:2188631..2189844- >CBS51388_003645-T1 ID=CBS51388_003645-T1|Name=CBS51388_003645-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4890bp|location=Sequence derived from alignment at An04:2188631..2189844- (Aspergillus niger CBS 513.88)
CTGGTCTTGCTGCTGGTGTGACCGAAGCCGTGGCAGTGGTCAATCCCATG
GAGGTTGTTAAGATTCGTTTGCAAGCACAACATCACAGTTTGGCGGACCC
TCTCGATACCCCCAAGTACCGCAGTGCACCACATGCGCTTTTCACCGTGA
TTAAGGAAGAGGGTTTCAGCACCCTGTACCGCGGTGTCTCTCTGACTGCC
CTTCGGCAAGGAACCAACCAAGCAGCCAACTTCACAGCCTACACCGAATT
GAAGGCTTTCCTCCAGAGGGTTCAGCCGGAGTACAGCAACACACAGCTGC
CTTCCTACCAGACAACTTTCATCGGTCTGATTTCTGGTGCTGTCGGACCT
TTCTCCAATGCCCCGATCGACACGATCAAGACGAGATTGCAGAAGACCCG
TGCTGAGCCCGGTCAATCAGCGGTGTCTCGTATCATGGTCATCGCGAAGG
ACATGTTCAAGCAAGAGGGTGCTCGTGCCTTCTACAAGGGTATCACGCCC
CGTGTGATGAGAGTCGCGCCTGGTCAGGCCGTCACTTTCACCGTGTATGA
GTTCCTGAAGGGCAAGCTGGAGAACTCCGGATGGGCCTTCGTCGGTGGAA
ACTATGAAGAGTAAGTAAAACCCCGCGGGTTCGTAGCCACCGGTGTTGAG
ATCGTGAAGAAGGAGACTGCCATGGGTCTGTACAAGGGACTGGGTGCCGT
CCTTGGTGGTATCATCCCGAAGATGGCCATCCGGTTCACCTCCTACGAAT
CTTACAAGCAAATGCTTGCCGATAAGGAGACTGGTGCTGTGACCAGCAAA
GCTACCTTCTTGGACACCATCAAAGTTCGGATGCAGCTCTCCCGCCGTGC
CCGGGCACCGGGTCTGGTGGTGGTGCTGGTATGATGGAAGCGCTCGTGTG
TCACCCTCTAGATGTCCGCAAAGACTGTACAAGGCCGCAATGGCAAGAAG
CCAGCCTCCCCAGCTGTGAACCTCATCGCTGGTCTTGCTGCTGGTGTGAC
CGAAGCCGTGGCAGTGGTCAATCCCATGGAGGTTGTTAAGATTCGTTTGC
AAGCACAACATCACAGTTTGGCGGACCCTCTCGATACCCCCAAGTACCGC
AGTGCACCACATGCGCTTTTCACCGTGATTAAGGAAGAGGGTTTCAGCAC
CCTGTACCGCGGTGTCTCTCTGACTGCCCTTCGGCAAGGAACCAACCAAG
CAGCCAACTTCACAGCCTACACCGAATTGAAGGCTTTCCTCCAGAGGGTT
CAGCCGGAGTACAGCAACACACAGCTGCCTTCCTACCAGACAACTTTCAT
CGGTCTGATTTCTGGTGCTGTCGGACCTTTCTCCAATGCCCCGATCGACA
CGATCAAGACGAGATTGCAGAAGACCCGTGCTGAGCCCGGTCAATCAGCG
GTGTCTCGTATCATGGTCATCGCGAAGGACATGTTCAAGCAAGAGGGTGC
TCGTGCCTTCTACAAGGGTATCACGCCCCGTGTGATGAGAGTCGCGCCTG
GTCAGGCCGTCACTTTCACCGTGTATGAGTTCCTGAAGGGCAAGCTGGAG
AACTCCGGATGGGCCTTCGTCGGTGGAAACTATGAAGAGTAAGTAAAACC
CCGCGGGTTCGTAGCCACCGGTGTTGAGATCGTGAAGAAGGAGACTGCCA
TGGGTCTGTACAAGGGACTGGGTGCCGTCCTTGGTGGTATCATCCCGAAG
ATGGCCATCCGGTTCACCTCCTACGAATCTTACAAGCAAATGCTTGCCGA
TAAGGAGACTGGTGCTGTGACCAGCAAAGCTACCTTCTTGGACACCATCA
AAGTTCGGATGCAGCTCTCCCGCCGTGCCCGGGCACCGGGTCTGGTGGTG
GTGCTGGTATGATGGAAGCGCTCGTGTGTCACCCTCTAGATGTCCGCAAA
GACTGTACAAGGCCGCAATGGCAAGAAGCCAGCCTCCCCAGCTGTGAACC
TCATCGCTGGTCTTGCTGCTGGTGTGACCGAAGCCGTGGCAGTGGTCAAT
CCCATGGAGGTTGTTAAGATTCGTTTGCAAGCACAACATCACAGTTTGGC
GGACCCTCTCGATACCCCCAAGTACCGCAGTGCACCACATGCGCTTTTCA
CCGTGATTAAGGAAGAGGGTTTCAGCACCCTGTACCGCGGTGTCTCTCTG
ACTGCCCTTCGGCAAGGAACCAACCAAGCAGCCAACTTCACAGCCTACAC
CGAATTGAAGGCTTTCCTCCAGAGGGTTCAGCCGGAGTACAGCAACACAC
AGCTGCCTTCCTACCAGACAACTTTCATCGGTCTGATTTCTGGTGCTGTC
GGACCTTTCTCCAATGCCCCGATCGACACGATCAAGACGAGATTGCAGAA
GACCCGTGCTGAGCCCGGTCAATCAGCGGTGTCTCGTATCATGGTCATCG
CGAAGGACATGTTCAAGCAAGAGGGTGCTCGTGCCTTCTACAAGGGTATC
ACGCCCCGTGTGATGAGAGTCGCGCCTGGTCAGGCCGTCACTTTCACCGT
GTATGAGTTCCTGAAGGGCAAGCTGGAGAACTCCGGATGGGCCTTCGTCG
GTGGAAACTATGAAGAGTAAGTAAAACCCCGCGGGTTCGTAGCCACCGGT
GTTGAGATCGTGAAGAAGGAGACTGCCATGGGTCTGTACAAGGGACTGGG
TGCCGTCCTTGGTGGTATCATCCCGAAGATGGCCATCCGGTTCACCTCCT
ACGAATCTTACAAGCAAATGCTTGCCGATAAGGAGACTGGTGCTGTGACC
AGCAAAGCTACCTTCTTGGACACCATCAAAGTTCGGATGCAGCTCTCCCG
CCGTGCCCGGGCACCGGGTCTGGTGGTGGTGCTGGTATGATGGAAGCGCT
CGTGTGTCACCCTCTAGATGTCCGCAAAGACTGTACAAGGCCGCAATGGC
AAGAAGCCAGCCTCCCCAGCTGTGAACCTCATCGCTGGTCTTGCTGCTGG
TGTGACCGAAGCCGTGGCAGTGGTCAATCCCATGGAGGTTGTTAAGATTC
GTTTGCAAGCACAACATCACAGTTTGGCGGACCCTCTCGATACCCCCAAG
TACCGCAGTGCACCACATGCGCTTTTCACCGTGATTAAGGAAGAGGGTTT
CAGCACCCTGTACCGCGGTGTCTCTCTGACTGCCCTTCGGCAAGGAACCA
ACCAAGCAGCCAACTTCACAGCCTACACCGAATTGAAGGCTTTCCTCCAG
AGGGTTCAGCCGGAGTACAGCAACACACAGCTGCCTTCCTACCAGACAAC
TTTCATCGGTCTGATTTCTGGTGCTGTCGGACCTTTCTCCAATGCCCCGA
TCGACACGATCAAGACGAGATTGCAGAAGACCCGTGCTGAGCCCGGTCAA
TCAGCGGTGTCTCGTATCATGGTCATCGCGAAGGACATGTTCAAGCAAGA
GGGTGCTCGTGCCTTCTACAAGGGTATCACGCCCCGTGTGATGAGAGTCG
CGCCTGGTCAGGCCGTCACTTTCACCGTGTATGAGTTCCTGAAGGGCAAG
CTGGAGAACTCCGGATGGGCCTTCGTCGGTGGAAACTATGAAGAGTAAGT
AAAACCCCGCGGGTTCGTAGCCACCGGTGTTGAGATCGTGAAGAAGGAGA
CTGCCATGGGTCTGTACAAGGGACTGGGTGCCGTCCTTGGTGGTATCATC
CCGAAGATGGCCATCCGGTTCACCTCCTACGAATCTTACAAGCAAATGCT
TGCCGATAAGGAGACTGGTGCTGTGACCAGCAAAGCTACCTTCTTGGACA
CCATCAAAGTTCGGATGCAGCTCTCCCGCCGTGCCCGGGCACCGGGTCTG
GTGGTGGTGCTGGTATGATGGAAGCGCTCGTGTGTCACCCTCTAGATGTC
CGCAAAGACTGTACAAGGCCGCAATGGCAAGAAGCCAGCCTCCCCAGCTG
TGAACCTCATCGCTGGTCTTGCTGCTGGTGTGACCGAAGCCGTGGCAGTG
GTCAATCCCATGGAGGTTGTTAAGATTCGTTTGCAAGCACAACATCACAG
TTTGGCGGACCCTCTCGATACCCCCAAGTACCGCAGTGCACCACATGCGC
TTTTCACCGTGATTAAGGAAGAGGGTTTCAGCACCCTGTACCGCGGTGTC
TCTCTGACTGCCCTTCGGCAAGGAACCAACCAAGCAGCCAACTTCACAGC
CTACACCGAATTGAAGGCTTTCCTCCAGAGGGTTCAGCCGGAGTACAGCA
ACACACAGCTGCCTTCCTACCAGACAACTTTCATCGGTCTGATTTCTGGT
GCTGTCGGACCTTTCTCCAATGCCCCGATCGACACGATCAAGACGAGATT
GCAGAAGACCCGTGCTGAGCCCGGTCAATCAGCGGTGTCTCGTATCATGG
TCATCGCGAAGGACATGTTCAAGCAAGAGGGTGCTCGTGCCTTCTACAAG
GGTATCACGCCCCGTGTGATGAGAGTCGCGCCTGGTCAGGCCGTCACTTT
CACCGTGTATGAGTTCCTGAAGGGCAAGCTGGAGAACTCCGGATGGGCCT
TCGTCGGTGGAAACTATGAAGAGTAAGTAAAACCCCGCGGGTTCGTAGCC
ACCGGTGTTGAGATCGTGAAGAAGGAGACTGCCATGGGTCTGTACAAGGG
ACTGGGTGCCGTCCTTGGTGGTATCATCCCGAAGATGGCCATCCGGTTCA
CCTCCTACGAATCTTACAAGCAAATGCTTGCCGATAAGGAGACTGGTGCT
GTGACCAGCAAAGCTACCTTCTTGGACACCATCAAAGTTCGGATGCAGCT
CTCCCGCCGTGCCCGGGCACCGGGTCTGGTGGTGGTGCTGGTATGATGGA
AGCGCTCGTGTGTCACCCTCTAGATGTCCGCAAAGACTGTACAAGGCCGC
AATGGCAAGAAGCCAGCCTCCCCAGCTGTGAACCTCATCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005347 | ATP transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR023395 |
| DBxref | InterPro:IPR018108 |
| DBxref | InterPro:IPR002067 |
| DBxref | PFAM:PF00153 |
| Product | Mitochondrial succinate-fumarate transporter |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:2188631..2189844 - |
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