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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:2281449..2282428- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003671-T1 ID=CBS51388_003671-T1|Name=CBS51388_003671-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=980bp|location=Sequence derived from alignment at An04:2281449..2282428- (Aspergillus niger CBS 513.88)
ATGAAGCTCTCTCTTCTTTCCTTATTCTTCACCCCCATTTTTGCTCTTCC
ATCTCACCTCACGCCGAGAAATGATATACCTCCTTTCTTCCTCCTAGCCG
GCGACAGCACCACCGCCGTCCAATCCAGCGGCGGAGGCGGCTGGGGCGAT
GGGTTCATCAACACGACACTCCACAAGGGAGCCAAAGGTATAAACTACGG
TCACGACGGAGCCACCACTGTCAGCTTCCGCTCCGGAGGCGACTGGGCCA
CCGTCCTCTCCAAGGTCGCAGAATACAAGTCCGACTACCGAGCCTTTGTG
ACCATCCAATTCGGACACAACGACCAGAAGCCCGCCGCGAATATCTCCTT
GGCTGAATACACCAGTAACCTAGAACAATTTGCAAAGGATGTCAAGAATG
CAGGAGGCACACCGATTCTGGTTACGCCCTTGTCTCGTCGCAACTATGAC
AATTCCACTGGGACACCACTCGTGATTGAGAATTTGGCGGACCAGAGAGC
GGCGACTATTGATGCTGCAAAGAATACAGACACATCCTATATTGATTTGA
ATAAGGCAAGTACGGATTACTTGAACAGTATTGGGCCAGCCGATGCGTAT
ACGTATAACTTGGCGTCGGATGATTATACGCATCTGAATGGGGAGGGGAG
CATAGTGTTTGGTGGGATGGTGGCTTCGTTGATTGATCAGGATTTCACAG
AGTTGAAGAGTGATGGGTATGTTAAGGTGATTGCGAAGCTTTTGGCGGCC
TTGGAGGAAGGCAAGTACTATTGGCCCTGATTTTCTGGGTTGTTTGATGG
AATTGGATGTTTCTGGTTTCTTGATGGAATGTGAATCAGCATGTGTTGCA
TTTATATAGTGTTTTTATCCATGATCAATGGTTGGTAGATGGTATCTACC
AAGCAGAAAATGACAGTTGTTACATCTCCATTCTGGAATATCTCAGTATG
GCATATGATCTGGCCAACCCAATGTTATGA back to topCoding sequence (CDS) from alignment at An04:2281449..2282428- >CBS51388_003671-T1 ID=CBS51388_003671-T1|Name=CBS51388_003671-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1674bp|location=Sequence derived from alignment at An04:2281449..2282428- (Aspergillus niger CBS 513.88)
TGTTTTTATCCATGATCAATGGTTGGTAGATGGTATCTACCAAGCAGAAA
ATGACAGTTGTTACATCTCCATTCTGGAATATCTCAGTATGGCATATGAT
CTGGCCAACCCAATGTTATGAATGAAGCTCTCTCTTCTTTCCTTATTCTT
CACCCCCATTTTTGCTCTTCCATCTCACCTCACGCCGAGAAATGATATAC
CTCCTTTCTTCCTCCTAGCCGGCGACAGCACCACCGCCGTCCAATCCAGC
GGCGGAGGCGGCTGGGGCGATGGGTTCATCAACACGACACTCCACAAGGG
AGCCAAAGGTATAAACTACGGTCACGACGGAGCCACCACTGTCAGCTTCC
GCTCCGGAGGCGACTGGGCCACCGTCCTCTCCAAGGTCGCAGAATACAAG
TCCGACTACCGAGCCTTTGTGACCATCCAATTCGGACACAACGACCAGAA
GCCCGCCGCGAATATCTCCTTGGCTGAATACACCAGTAACCTAGAACAAT
TTGCAAAGGATGTCAAGAATGCAGGAGGCACACCGATTCTGGTTACGCCC
TTGTCTCGTCGCAACTATGACAATTCCACTGGGACACCACTCGTGATTGA
GAATTTGGCGGACCAGAGAGCGGCGACTATTGATGCTGCAAAGAATACAG
ACACATCCTATATTGATTTGAATAAGGCAAGTACGGATTACTTGAACAGT
ATTGGGCCAGCCGATGCGTATACGTATAACTTGGCGTCGGATGATTATAC
GCATCTGAATGGGGAGGGGAGCATAGTGTTTGGTGGGATGGTGGCTTCGT
TGATTGATCAGGATTTCACAGAGTTGAAGAGTGATGGTGTTTTTATCCAT
GATCAATGGTTGGTAGATGGTATCTACCAAGCAGAAAATGACAGTTGTTA
CATCTCCATTCTGGAATATCTCAGTATGGCATATGATCTGGCCAACCCAA
TGTTATGAATGAAGCTCTCTCTTCTTTCCTTATTCTTCACCCCCATTTTT
GCTCTTCCATCTCACCTCACGCCGAGAAATGATATACCTCCTTTCTTCCT
CCTAGCCGGCGACAGCACCACCGCCGTCCAATCCAGCGGCGGAGGCGGCT
GGGGCGATGGGTTCATCAACACGACACTCCACAAGGGAGCCAAAGGTATA
AACTACGGTCACGACGGAGCCACCACTGTCAGCTTCCGCTCCGGAGGCGA
CTGGGCCACCGTCCTCTCCAAGGTCGCAGAATACAAGTCCGACTACCGAG
CCTTTGTGACCATCCAATTCGGACACAACGACCAGAAGCCCGCCGCGAAT
ATCTCCTTGGCTGAATACACCAGTAACCTAGAACAATTTGCAAAGGATGT
CAAGAATGCAGGAGGCACACCGATTCTGGTTACGCCCTTGTCTCGTCGCA
ACTATGACAATTCCACTGGGACACCACTCGTGATTGAGAATTTGGCGGAC
CAGAGAGCGGCGACTATTGATGCTGCAAAGAATACAGACACATCCTATAT
TGATTTGAATAAGGCAAGTACGGATTACTTGAACAGTATTGGGCCAGCCG
ATGCGTATACGTATAACTTGGCGTCGGATGATTATACGCATCTGAATGGG
GAGGGGAGCATAGTGTTTGGTGGGATGGTGGCTTCGTTGATTGATCAGGA
TTTCACAGAGTTGAAGAGTGATGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016787 | hydrolase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-15) |
| Note | CAZy:CE12 |
| DBxref | InterPro:IPR037459 |
| DBxref | InterPro:IPR036514 |
| DBxref | InterPro:IPR013830 |
| DBxref | PFAM:PF13472 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:2281449..2282428 - |
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