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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:2416904..2417689+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003718-T1 ID=CBS51388_003718-T1|Name=CBS51388_003718-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=786bp|location=Sequence derived from alignment at An04:2416904..2417689+ (Aspergillus niger CBS 513.88)
ATGGCTCGCATTCTCATTACTGGCTCTGTCGACGGACTTGGCCTTGAGGC
TGCCAGACAGCTTGTCCACAGAGGCCACACTGTGTACCTGCATGCACGCA
ATCAACAACGTGCAATGGACGCGAAATCCGCATGTCCAGGTGCCGCCGGG
GTGCTGACGGCCGACTTATCCAGTGTGGCAGAAACACAGAAGCTCTGCCA
CGATGTTAACGCAATTGGCAATTTTGATGCCGTCATCCTCAACGCTGGAC
TCATGCAGGGTGGCTTTCGCAAAACCCCGGATACTGGTGCTCCAGCCTTG
GTGTCTGTCAACCTTATCTCACCTTATGTGATGTCTTGCTTGCTGCGTCC
ACCGAAGCGCCTCATTTTCATCTCCTCAAACCTGCACCGGCAGGCAAACA
TGGCGAGCATGGATGACATGTTCTGGTTCAAGCGCGGGGAGACCAGGTAC
CAGGACTACCCAGCATATTGTGACTCCAAGCTTCATGTCATGCTTCTCGC
CAATGCGGTCGCTCGGCGGTTCAAAAACACTTCAGTGACTTCAGTGCACC
CCGGGTGGGTGGCGACAAAGCTTGGCGGACAGGGTGCTCCAGATAAACTG
GAGGACGGTGTCGAAACGTATGTCATGTTAGCCGAAGGGGATTATGATGA
ACAGAACCTGTCTGGAGCTTATTTTGAGCCCAAGAGGAAGATTGGCCAGC
CGATTCCGGCTGCAAGAGATGAGGATCTCCAAGAGAAGGTGGTGCAAGCC
TGCGAGGAGGTTACTGGATTGAGGCTGTCGGCTTAG back to topCoding sequence (CDS) from alignment at An04:2416904..2417689+ >CBS51388_003718-T1 ID=CBS51388_003718-T1|Name=CBS51388_003718-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=786bp|location=Sequence derived from alignment at An04:2416904..2417689+ (Aspergillus niger CBS 513.88)
ATGGCTCGCATTCTCATTACTGGCTCTGTCGACGGACTTGGCCTTGAGGC
TGCCAGACAGCTTGTCCACAGAGGCCACACTGTGTACCTGCATGCACGCA
ATCAACAACGTGCAATGGACGCGAAATCCGCATGTCCAGGTGCCGCCGGG
GTGCTGACGGCCGACTTATCCAGTGTGGCAGAAACACAGAAGCTCTGCCA
CGATGTTAACGCAATTGGCAATTTTGATGCCGTCATCCTCAACGCTGGAC
TCATGCAGGGTGGCTTTCGCAAAACCCCGGATACTGGTGCTCCAGCCTTG
GTGTCTGTCAACCTTATCTCACCTTATGTGATGTCTTGCTTGCTGCGTCC
ACCGAAGCGCCTCATTTTCATCTCCTCAAACCTGCACCGGCAGGCAAACA
TGGCGAGCATGGATGACATGTTCTGGTTCAAGCGCGGGGAGACCAGGTAC
CAGGACTACCCAGCATATTGTGACTCCAAGCTTCATGTCATGCTTCTCGC
CAATGCGGTCGCTCGGCGGTTCAAAAACACTTCAGTGACTTCAGTGCACC
CCGGGTGGGTGGCGACAAAGCTTGGCGGACAGGGTGCTCCAGATAAACTG
GAGGACGGTGTCGAAACGTATGTCATGTTAGCCGAAGGGGATTATGATGA
ACAGAACCTGTCTGGAGCTTATTTTGAGCCCAAGAGGAAGATTGGCCAGC
CGATTCCGGCTGCAAGAGATGAGGATCTCCAAGAGAAGGTGGTGCAAGCC
TGCGAGGAGGTTACTGGATTGAGGCTGTCGGCTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_4.9 |
| Note | SMCOG1001:short-chain dehydrogenase/reductase SDR |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | putative secondary metabolism biosynthetic enzyme |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:2416904..2417689 + |
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