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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:2426122..2427058- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003722-T1 ID=CBS51388_003722-T1|Name=CBS51388_003722-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=937bp|location=Sequence derived from alignment at An04:2426122..2427058- (Aspergillus niger CBS 513.88)
ATGGCGGGTACCAGACTGAACGGTGGAATCGCCCTTGTGACTGGTGTAAG
TCGGTTGTCGCTATTTTGCTTCCATCGTATCGAGAACCCACAAAAGCGAA
GATTAAATCAAATGTGACTGAGAACTCAATCTGCAGGCCGCATCAGGCAT
TGGGAAAGATACCTGCTTCGCTCTCGCCGAAGCCGGCGTCGAAGCAATCC
TCCTGGCGGACCTGAACCTACCTACAGAAACCACTCTCCAGGAGTGTCAA
AAGTTCGCCTCCCACCCCAAATTCCGTGCCCTGTCGGTAGTGGTAGACGT
CACCGATGAGGCCAGCGTCGACAATATGGTCCAGCGCGCCGTGAGCGAGC
TCGGGCGTATTGACTACTGCGTGCACTCCGCCGGCATCTCTGGGAACTCG
CGCACCCGCACCGCAACCCTGAACGTCGACGCATTCGACCAATCCATGAG
AACCAACTCCCGCGGGACTATGCTGGTGCTGCGGGCCGTCTCCCAAGCCA
TGTCGCTGCAAGAGCCACGCTCGTACACCAGCACGCGCAGTAACACGACC
CGCAGTCTGGGCCGCGGGTCCATCGTCGTGCTGTCTTCGATCAATGGCCT
GATCTCAGTGCCCGGAATGATGCCGTATACGGCATCCAAGCACGCGACCA
TCGGGATCGCCCAAACTGCCGCCGTCGACAACTTTGAGCATCACATCCGC
GTAAACATTGTATGTCCGTCATGGACCGATACTCCCATGATGCAGAAGAC
AATCAGCAACGTCCCTACCCTGGAGCAGGCCATTGCGAAACTGTGTCCTC
TCGTGAGGATCGCCATGCCAGAGGAGGTATCTGATGCGGTCGTGTTTCTC
TGTAGCCCCGCCGCTTCCTTTATCAATGGAGAAAGTCTGGTGATTGATGC
AGGCTTCACTTTGACGGGGTTCCGGATGGGCCACTAA back to topCoding sequence (CDS) from alignment at An04:2426122..2427058- >CBS51388_003722-T1 ID=CBS51388_003722-T1|Name=CBS51388_003722-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1692bp|location=Sequence derived from alignment at An04:2426122..2427058- (Aspergillus niger CBS 513.88)
GCCGCATCAGGCATTGGGAAAGATACCTGCTTCGCTCTCGCCGAAGCCGG
CGTCGAAGCAATCCTCCTGGCGGACCTGAACCTACCTACAGAAACCACTC
TCCAGGAGTGTCAAAAGTTCGCCTCCCACCCCAAATTCCGTGCCCTGTCG
GTAGTGGTAGACGTCACCGATGAGGCCAGCGTCGACAATATGGTCCAGCG
CGCCGTGAGCGAGCTCGGGCGTATTGACTACTGCGTGCACTCCGCCGGCA
TCTCTGGGAACTCGCGCACCCGCACCGCAACCCTGAACGTCGACGCATTC
GACCAATCCATGAGAACCAACTCCCGCGGGACTATGCTGGTGCTGCGGGC
CGTCTCCCAAGCCATGTCGCTGCAAGAGCCACGCTCGTACACCAGCACGC
GCAGTAACACGACCCGCAGTCTGGGCCGCGGGTCCATCGTCGTGCTGTCT
TCGATCAATGGCCTGATCTCAGTGCCCGGAATGATGCCGTATACGGCATC
CAAGCACGCGACCATCGGGATCGCCCAAACTGCCGCCGTCGACAACTTTG
AGCATCACATCCGCGTAAACATTGTATGTCCGTCATGGACCGATACTCCC
ATGATGCAGAAGACAATCAGCAACGTCCCTACCCTGGAGCAGGCCATTGC
GAAACTGTGTCCTCTCGTGAGGATCGCCATGCCAGAGGAGGTATCTGATG
CGGTCGTGTTTCTCTGTAGCCCCGCCGCTTCCTTTATCAATGGAGAAAGT
CTGGTGATTGATGCAGGCTTCACTTTGACGGGGTTCCGGATGGGCCACTA
AATGGCGGGTACCAGACTGAACGGTGGAATCGCCCTTGTGACTGGTGCCG
CATCAGGCATTGGGAAAGATACCTGCTTCGCTCTCGCCGAAGCCGGCGTC
GAAGCAATCCTCCTGGCGGACCTGAACCTACCTACAGAAACCACTCTCCA
GGAGTGTCAAAAGTTCGCCTCCCACCCCAAATTCCGTGCCCTGTCGGTAG
TGGTAGACGTCACCGATGAGGCCAGCGTCGACAATATGGTCCAGCGCGCC
GTGAGCGAGCTCGGGCGTATTGACTACTGCGTGCACTCCGCCGGCATCTC
TGGGAACTCGCGCACCCGCACCGCAACCCTGAACGTCGACGCATTCGACC
AATCCATGAGAACCAACTCCCGCGGGACTATGCTGGTGCTGCGGGCCGTC
TCCCAAGCCATGTCGCTGCAAGAGCCACGCTCGTACACCAGCACGCGCAG
TAACACGACCCGCAGTCTGGGCCGCGGGTCCATCGTCGTGCTGTCTTCGA
TCAATGGCCTGATCTCAGTGCCCGGAATGATGCCGTATACGGCATCCAAG
CACGCGACCATCGGGATCGCCCAAACTGCCGCCGTCGACAACTTTGAGCA
TCACATCCGCGTAAACATTGTATGTCCGTCATGGACCGATACTCCCATGA
TGCAGAAGACAATCAGCAACGTCCCTACCCTGGAGCAGGCCATTGCGAAA
CTGTGTCCTCTCGTGAGGATCGCCATGCCAGAGGAGGTATCTGATGCGGT
CGTGTTTCTCTGTAGCCCCGCCGCTTCCTTTATCAATGGAGAAAGTCTGG
TGATTGATGCAGGCTTCACTTTGACGGGGTTCCGGATGGGCCACTAAATG
GCGGGTACCAGACTGAACGGTGGAATCGCCCTTGTGACTGGT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_4.9 |
| Note | SMCOG1001:short-chain dehydrogenase/reductase SDR |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR020904 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF01370 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | putative secondary metabolism biosynthetic enzyme |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:2426122..2427058 - |
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