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Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:2428367..2429021- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003724-T1 ID=CBS51388_003724-T1|Name=CBS51388_003724-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=655bp|location=Sequence derived from alignment at An04:2428367..2429021- (Aspergillus niger CBS 513.88)
ATGGAGCAACTGTAAGTCGACATACCTTGTTCGGGCCCTTTGATAGTCAA
TGACCGTGTGCTGCACTAGGATCGTCTTTCGTGCTTTTCAGGGTGTTGGC
GGAGCGGGCAACTATTCTCTCTGTGCTGCCATTCTGCTGGACCTGGTCCC
GACAGAGAAATATGCGACGTACATGAGTTCACTATCCCTGGTATACGCGA
TATCCTTACTATTTGGACCTCTGATGGGAGGGGGTATCTCCGACTCGTCC
ACATGGCGCTGGGTGTTTCTGTTGAATGTCCCTCCGGGCGCACTGGCTGG
GATAGGGCTCGCTCTGGTCCTGCCCAATCGGTTCCCCTATCACAACGAAC
CATCCAAGGAGAAGACAATGTCATCCGTGCTGGCATCATTGCGGCAAATG
ATTCAGAGAGTCGACTTACTCGGCTCCAGCTTGCTGTTAGTTGCAACAAT
TCTCCTGGTAACGGCTTTGGAGGAAGCCAATGAGGAATACACTTGGAATT
CGGCTTTTACCATTGTGCTGCTTATCATCTCCGGACTGGCGTGGATCGCC
TTTCTACTGTGGGAAAGACGGGTGACACTCTATTCTAAGCACATTGAGCC
GGTCTTTCCGTGGAGGTTCGTTTGTAACCGAGTCTGGGTCAGAATGTTGT
TGTAG back to topCoding sequence (CDS) from alignment at An04:2428367..2429021- >CBS51388_003724-T1 ID=CBS51388_003724-T1|Name=CBS51388_003724-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1194bp|location=Sequence derived from alignment at An04:2428367..2429021- (Aspergillus niger CBS 513.88)
GATCGTCTTTCGTGCTTTTCAGGGTGTTGGCGGAGCGGGCAACTATTCTC
TCTGTGCTGCCATTCTGCTGGACCTGGTCCCGACAGAGAAATATGCGACG
TACATGAGTTCACTATCCCTGGTATACGCGATATCCTTACTATTTGGACC
TCTGATGGGAGGGGGTATCTCCGACTCGTCCACATGGCGCTGGGTGTTTC
TGTTGAATGTCCCTCCGGGCGCACTGGCTGGGATAGGGCTCGCTCTGGTC
CTGCCCAATCGGTTCCCCTATCACAACGAACCATCCAAGGAGAAGACAAT
GTCATCCGTGCTGGCATCATTGCGGCAAATGATTCAGAGAGTCGACTTAC
TCGGCTCCAGCTTGCTGTTAGTTGCAACAATTCTCCTGGTAACGGCTTTG
GAGGAAGCCAATGAGGAATACACTTGGAATTCGGCTTTTACCATTGTGCT
GCTTATCATCTCCGGACTGGCGTGGATCGCCTTTCTACTGTGGGAAAGAC
GGGTGACACTCTATTCTAAGCACATTGAGCCGGTCTTTCCGTGGAGGTTC
GTTTGTAACCGAGTCTGGGTCAGAATGTTGTTGTAGATGGAGCAACTGAT
CGTCTTTCGTGCTTTTCAGGGTGTTGGCGGAGCGGGCAACTATTCTCTCT
GTGCTGCCATTCTGCTGGACCTGGTCCCGACAGAGAAATATGCGACGTAC
ATGAGTTCACTATCCCTGGTATACGCGATATCCTTACTATTTGGACCTCT
GATGGGAGGGGGTATCTCCGACTCGTCCACATGGCGCTGGGTGTTTCTGT
TGAATGTCCCTCCGGGCGCACTGGCTGGGATAGGGCTCGCTCTGGTCCTG
CCCAATCGGTTCCCCTATCACAACGAACCATCCAAGGAGAAGACAATGTC
ATCCGTGCTGGCATCATTGCGGCAAATGATTCAGAGAGTCGACTTACTCG
GCTCCAGCTTGCTGTTAGTTGCAACAATTCTCCTGGTAACGGCTTTGGAG
GAAGCCAATGAGGAATACACTTGGAATTCGGCTTTTACCATTGTGCTGCT
TATCATCTCCGGACTGGCGTGGATCGCCTTTCTACTGTGGGAAAGACGGG
TGACACTCTATTCTAAGCACATTGAGCCGGTCTTTCCGTGGAGGTTCGTT
TGTAACCGAGTCTGGGTCAGAATGTTGTTGTAGATGGAGCAACT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_4.9 |
| Note | SMCOG1005: EmrB/QacA |
| Note | SMCOG1005:Drug resistance transporter |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:2428367..2429021 - |
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